EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000012459 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: transcription termination factor 2
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 41928 bases
Position: chrJH602085.1:12756305-12798232
Accession: 101699476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000017398	ResIII	PF04851.15	2.9e-10	1	1
ENSHGLP00000017399	ResIII	PF04851.15	2.9e-10	1	1
ENSHGLP00000017398	DEAD	PF00270.29	1.3e-06	1	1
ENSHGLP00000017399	DEAD	PF00270.29	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000017572	-	4209	XM_021265750	ENSHGLP00000017399	973 (aa)	XP_021121409	UPI000A33E9B0
ENSHGLT00000017571	-	4276	XM_004853813	ENSHGLP00000017398	973 (aa)	XP_004853870	UPI000A33E9B0

Gene Model

Click here to download ENSHGLG00000012459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000012459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000012459	-	51	33.505	ENSHGLG00000000753	RAD54L	70	31.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000012459	-	100	85.714	ENSCLAG00000014230	-	100	85.714	Chinchilla_lanigera
ENSHGLG00000012459	-	77	59.342	ENSELUG00000000162	-	76	55.006	Esox_lucius
ENSHGLG00000012459	-	100	100.000	ENSHGLG00100010506	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000012459	-	78	60.836	ENSLOCG00000011128	-	67	60.836	Lepisosteus_oculatus
ENSHGLG00000012459	-	100	67.745	ENSMPUG00000001606	-	85	68.687	Mustela_putorius_furo
ENSHGLG00000012459	-	100	77.744	ENSODEG00000006362	-	87	78.051	Octodon_degus
ENSHGLG00000012459	-	77	60.766	ENSSFOG00015009772	-	68	61.691	Scleropages_formosus