EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000012474 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 104827 bases
Position: chrJH602095.1:9701070-9805896
Accession: 101724472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000017420	Ago_hook	PF10427.9	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000017594	-	5649	XM_013076336	ENSHGLP00000017420	1882 (aa)	XP_012931790	-
ENSHGLT00000017593	-	204	-	ENSHGLP00000017419	68 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000012474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000012474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000012474	-	94	40.681	ENSHGLG00000004809	TNRC6C	98	40.030
ENSHGLG00000012474	-	94	76.348	ENSHGLG00000007368	-	93	76.404
ENSHGLG00000012474	-	97	36.538	ENSHGLG00000009306	TNRC6B	97	36.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000012474	-	100	93.970	ENSG00000090905	TNRC6A	99	94.022	Homo_sapiens
ENSHGLG00000012474	-	97	91.167	ENSAMEG00000009333	TNRC6A	99	91.009	Ailuropoda_melanoleuca
ENSHGLG00000012474	-	97	77.964	ENSAPLG00000009978	TNRC6A	99	77.859	Anas_platyrhynchos
ENSHGLG00000012474	-	100	52.102	ENSACAG00000011857	TNRC6A	99	54.197	Anolis_carolinensis
ENSHGLG00000012474	-	100	93.954	ENSANAG00000025252	TNRC6A	99	94.111	Aotus_nancymaae
ENSHGLG00000012474	-	91	56.132	ENSAMXG00000019919	tnrc6a	99	55.977	Astyanax_mexicanus
ENSHGLG00000012474	-	100	92.838	ENSBTAG00000017999	TNRC6A	99	92.691	Bos_taurus
ENSHGLG00000012474	-	100	91.727	ENSCJAG00000020677	TNRC6A	99	92.761	Callithrix_jacchus
ENSHGLG00000012474	-	100	90.783	ENSCAFG00000017531	TNRC6A	98	93.629	Canis_familiaris
ENSHGLG00000012474	-	97	93.615	ENSCAFG00020021160	TNRC6A	99	93.669	Canis_lupus_dingo
ENSHGLG00000012474	-	100	92.733	ENSCHIG00000019448	TNRC6A	99	92.259	Capra_hircus
ENSHGLG00000012474	-	100	93.799	ENSTSYG00000012711	TNRC6A	99	93.852	Carlito_syrichta
ENSHGLG00000012474	-	100	95.419	ENSCPOG00000036684	TNRC6A	99	95.419	Cavia_porcellus
ENSHGLG00000012474	-	100	94.013	ENSCCAG00000033664	TNRC6A	99	94.223	Cebus_capucinus
ENSHGLG00000012474	-	99	93.589	ENSCATG00000019284	TNRC6A	99	93.852	Cercocebus_atys
ENSHGLG00000012474	-	100	91.014	ENSCLAG00000010217	TNRC6A	99	91.067	Chinchilla_lanigera
ENSHGLG00000012474	-	100	91.709	ENSCSAG00000006561	TNRC6A	99	91.914	Chlorocebus_sabaeus
ENSHGLG00000012474	-	95	86.521	ENSCHOG00000009374	TNRC6A	94	86.521	Choloepus_hoffmanni
ENSHGLG00000012474	-	91	80.600	ENSCPBG00000001881	TNRC6A	99	80.589	Chrysemys_picta_bellii
ENSHGLG00000012474	-	100	94.220	ENSCANG00000041549	TNRC6A	99	94.167	Colobus_angolensis_palliatus
ENSHGLG00000012474	-	100	92.838	ENSCGRG00001015021	Tnrc6a	99	92.891	Cricetulus_griseus_chok1gshd
ENSHGLG00000012474	-	100	92.053	ENSCGRG00000013351	Tnrc6a	99	92.053	Cricetulus_griseus_crigri
ENSHGLG00000012474	-	91	56.261	ENSDARG00000079688	tnrc6a	99	56.292	Danio_rerio
ENSHGLG00000012474	-	97	89.111	ENSDNOG00000013989	TNRC6A	98	89.058	Dasypus_novemcinctus
ENSHGLG00000012474	-	97	82.806	ENSETEG00000014658	TNRC6A	98	82.859	Echinops_telfairi
ENSHGLG00000012474	-	100	93.211	ENSEASG00005017693	TNRC6A	99	93.368	Equus_asinus_asinus
ENSHGLG00000012474	-	100	90.867	ENSECAG00000025056	TNRC6A	98	93.723	Equus_caballus
ENSHGLG00000012474	-	97	85.354	ENSEEUG00000004530	TNRC6A	98	85.407	Erinaceus_europaeus
ENSHGLG00000012474	-	100	92.579	ENSFCAG00000025236	TNRC6A	99	92.895	Felis_catus
ENSHGLG00000012474	-	100	74.937	ENSFALG00000003757	TNRC6A	99	75.887	Ficedula_albicollis
ENSHGLG00000012474	-	91	80.911	ENSGALG00000006068	TNRC6A	99	81.373	Gallus_gallus
ENSHGLG00000012474	-	91	79.804	ENSGAGG00000023209	TNRC6A	99	80.150	Gopherus_agassizii
ENSHGLG00000012474	-	99	93.935	ENSGGOG00000005137	TNRC6A	99	94.040	Gorilla_gorilla
ENSHGLG00000012474	-	99	98.722	ENSHGLG00100012496	-	99	98.722	Heterocephalus_glaber_male
ENSHGLG00000012474	-	100	91.169	ENSSTOG00000023394	TNRC6A	98	91.271	Ictidomys_tridecemlineatus
ENSHGLG00000012474	-	97	66.528	ENSLACG00000006277	TNRC6A	99	67.048	Latimeria_chalumnae
ENSHGLG00000012474	-	99	79.470	ENSLOCG00000005517	tnrc6a	92	79.470	Lepisosteus_oculatus
ENSHGLG00000012474	-	97	92.803	ENSLAFG00000004209	TNRC6A	99	92.749	Loxodonta_africana
ENSHGLG00000012474	-	97	90.942	ENSMFAG00000003824	TNRC6A	99	91.047	Macaca_fascicularis
ENSHGLG00000012474	-	100	93.957	ENSMMUG00000020428	TNRC6A	99	94.062	Macaca_mulatta
ENSHGLG00000012474	-	100	93.570	ENSMNEG00000034854	TNRC6A	99	93.675	Macaca_nemestrina
ENSHGLG00000012474	-	97	90.392	ENSMLEG00000042737	TNRC6A	97	90.705	Mandrillus_leucophaeus
ENSHGLG00000012474	-	100	75.811	ENSMGAG00000006455	TNRC6A	99	76.268	Meleagris_gallopavo
ENSHGLG00000012474	-	100	92.528	ENSMAUG00000012750	Tnrc6a	99	92.687	Mesocricetus_auratus
ENSHGLG00000012474	-	100	94.494	ENSMICG00000030685	TNRC6A	99	94.494	Microcebus_murinus
ENSHGLG00000012474	-	100	92.417	ENSMOCG00000000152	Tnrc6a	99	92.470	Microtus_ochrogaster
ENSHGLG00000012474	-	100	77.307	ENSMODG00000016348	TNRC6A	98	78.183	Monodelphis_domestica
ENSHGLG00000012474	-	99	90.837	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	90.890	Mus_caroli
ENSHGLG00000012474	-	100	91.522	ENSMUSG00000052707	Tnrc6a	99	91.627	Mus_musculus
ENSHGLG00000012474	-	99	91.530	MGP_PahariEiJ_G0013635	Tnrc6a	99	91.583	Mus_pahari
ENSHGLG00000012474	-	100	89.014	MGP_SPRETEiJ_G0031539	Tnrc6a	100	88.992	Mus_spretus
ENSHGLG00000012474	-	97	82.712	ENSMPUG00000012324	TNRC6A	99	82.658	Mustela_putorius_furo
ENSHGLG00000012474	-	97	88.608	ENSMLUG00000002701	TNRC6A	99	88.713	Myotis_lucifugus
ENSHGLG00000012474	-	100	93.158	ENSNGAG00000020702	Tnrc6a	99	93.158	Nannospalax_galili
ENSHGLG00000012474	-	97	94.457	ENSNLEG00000011851	TNRC6A	98	94.457	Nomascus_leucogenys
ENSHGLG00000012474	-	74	81.063	ENSMEUG00000015959	-	74	81.174	Notamacropus_eugenii
ENSHGLG00000012474	-	96	89.963	ENSOPRG00000005819	TNRC6A	96	90.672	Ochotona_princeps
ENSHGLG00000012474	-	99	89.703	ENSODEG00000012802	TNRC6A	99	89.597	Octodon_degus
ENSHGLG00000012474	-	88	78.841	ENSOANG00000007672	TNRC6A	99	78.809	Ornithorhynchus_anatinus
ENSHGLG00000012474	-	97	89.035	ENSOCUG00000004325	TNRC6A	99	88.983	Oryctolagus_cuniculus
ENSHGLG00000012474	-	99	91.542	ENSOGAG00000006666	TNRC6A	100	91.594	Otolemur_garnettii
ENSHGLG00000012474	-	99	89.455	ENSOARG00000017950	TNRC6A	98	93.768	Ovis_aries
ENSHGLG00000012474	-	100	93.724	ENSPPAG00000028379	TNRC6A	99	93.933	Pan_paniscus
ENSHGLG00000012474	-	100	92.579	ENSPPRG00000005861	TNRC6A	99	92.895	Panthera_pardus
ENSHGLG00000012474	-	100	91.405	ENSPTIG00000006346	TNRC6A	99	91.457	Panthera_tigris_altaica
ENSHGLG00000012474	-	99	90.210	ENSPTRG00000007898	TNRC6A	99	91.411	Pan_troglodytes
ENSHGLG00000012474	-	100	91.518	ENSPANG00000018523	TNRC6A	99	91.675	Papio_anubis
ENSHGLG00000012474	-	87	75.581	ENSPKIG00000012859	tnrc6a	98	75.581	Paramormyrops_kingsleyae
ENSHGLG00000012474	-	77	75.676	ENSPSIG00000003965	TNRC6A	100	75.743	Pelodiscus_sinensis
ENSHGLG00000012474	-	100	92.729	ENSPEMG00000016318	Tnrc6a	99	92.677	Peromyscus_maniculatus_bairdii
ENSHGLG00000012474	-	97	81.307	ENSPCIG00000012106	TNRC6A	99	81.575	Phascolarctos_cinereus
ENSHGLG00000012474	-	100	90.960	ENSPPYG00000007202	TNRC6A	99	91.113	Pongo_abelii
ENSHGLG00000012474	-	95	98.969	ENSPCAG00000008260	TNRC6A	94	98.969	Procavia_capensis
ENSHGLG00000012474	-	100	92.025	ENSPCOG00000010134	TNRC6A	99	92.025	Propithecus_coquereli
ENSHGLG00000012474	-	89	68.297	ENSPVAG00000012066	TNRC6A	99	68.642	Pteropus_vampyrus
ENSHGLG00000012474	-	100	91.366	ENSRNOG00000024737	Tnrc6a	99	91.156	Rattus_norvegicus
ENSHGLG00000012474	-	97	94.543	ENSRBIG00000014222	TNRC6A	98	94.598	Rhinopithecus_bieti
ENSHGLG00000012474	-	100	91.992	ENSRROG00000032360	TNRC6A	99	91.992	Rhinopithecus_roxellana
ENSHGLG00000012474	-	97	91.772	ENSSBOG00000036197	TNRC6A	99	92.752	Saimiri_boliviensis_boliviensis
ENSHGLG00000012474	-	91	82.896	ENSSHAG00000008811	TNRC6A	99	83.295	Sarcophilus_harrisii
ENSHGLG00000012474	-	91	57.348	ENSSFOG00015008920	tnrc6a	99	57.421	Scleropages_formosus
ENSHGLG00000012474	-	71	75.089	ENSSARG00000002479	TNRC6A	88	76.038	Sorex_araneus
ENSHGLG00000012474	-	90	77.247	ENSSPUG00000010525	TNRC6A	100	77.304	Sphenodon_punctatus
ENSHGLG00000012474	-	100	92.932	ENSSSCG00000038870	TNRC6A	99	95.388	Sus_scrofa
ENSHGLG00000012474	-	100	78.051	ENSTGUG00000006142	TNRC6A	99	78.889	Taeniopygia_guttata
ENSHGLG00000012474	-	97	89.753	ENSTBEG00000014965	TNRC6A	99	89.648	Tupaia_belangeri
ENSHGLG00000012474	-	93	89.644	ENSTTRG00000002008	TNRC6A	92	89.644	Tursiops_truncatus
ENSHGLG00000012474	-	79	94.783	ENSUAMG00000006656	-	93	94.314	Ursus_americanus
ENSHGLG00000012474	-	99	90.402	ENSUMAG00000008274	TNRC6A	99	95.085	Ursus_maritimus
ENSHGLG00000012474	-	55	84.828	ENSVPAG00000010764	-	57	84.828	Vicugna_pacos
ENSHGLG00000012474	-	99	93.027	ENSVVUG00000005380	TNRC6A	99	93.133	Vulpes_vulpes
ENSHGLG00000012474	-	95	62.755	ENSXETG00000030437	TNRC6A	99	63.195	Xenopus_tropicalis