EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000012646 (Gene tree)
Gene ID: -
Gene Symbol: PLEC
Alias: EBS1|PCN|PLEC1|PLTN
Full Name: plectin
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 62721 bases
Position: chrJH602048.1:12835950-12898670
Accession: 101703656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000017678	S10_plectin	PF03501.15	5e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000017850	PLEC-201	14925	XM_004837769	ENSHGLP00000017675	4588 (aa)	XP_004837826	UPI000350294B
ENSHGLT00000017851	PLEC-202	15327	XM_004837777	ENSHGLP00000017676	4535 (aa)	XP_004837834	-
ENSHGLT00000017852	PLEC-203	13569	-	ENSHGLP00000017677	4522 (aa)	-	UPI000A3338B8
ENSHGLT00000017853	PLEC-204	15946	XM_021250464	ENSHGLP00000017678	4686 (aa)	XP_021106123	UPI00034F3425
ENSHGLT00000017854	PLEC-205	13539	-	ENSHGLP00000017679	4512 (aa)	-	UPI00034FACCE
ENSHGLT00000017855	PLEC-206	14724	XM_004837773	ENSHGLP00000017680	4549 (aa)	XP_004837830	UPI00034FC353
ENSHGLT00000017856	PLEC-207	13632	XM_004837774	ENSHGLP00000017681	4543 (aa)	XP_004837831	-
ENSHGLT00000017857	PLEC-208	14818	XM_004837775	ENSHGLP00000017682	4544 (aa)	XP_004837832	UPI00034F4CCC

Gene Model

Click here to download ENSHGLG00000012646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000012646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000012646	PLEC	100	93.154	ENSG00000178209	PLEC	100	100.000	Homo_sapiens
ENSHGLG00000012646	PLEC	100	90.045	ENSAMEG00000006191	PLEC	100	90.049	Ailuropoda_melanoleuca
ENSHGLG00000012646	PLEC	100	92.918	ENSANAG00000032431	PLEC	100	92.918	Aotus_nancymaae
ENSHGLG00000012646	PLEC	100	91.933	ENSBTAG00000011922	PLEC	100	91.933	Bos_taurus
ENSHGLG00000012646	PLEC	100	93.217	ENSCJAG00000021472	PLEC	100	93.217	Callithrix_jacchus
ENSHGLG00000012646	PLEC	100	92.006	ENSCAFG00000001433	PLEC	100	92.006	Canis_familiaris
ENSHGLG00000012646	PLEC	88	91.730	ENSCHIG00000022260	PLEC	99	91.730	Capra_hircus
ENSHGLG00000012646	PLEC	100	93.815	ENSTSYG00000033419	PLEC	100	93.815	Carlito_syrichta
ENSHGLG00000012646	PLEC	100	96.671	ENSCPOG00000007957	PLEC	100	96.671	Cavia_porcellus
ENSHGLG00000012646	PLEC	100	93.366	ENSCCAG00000031237	PLEC	100	93.366	Cebus_capucinus
ENSHGLG00000012646	PLEC	100	93.581	ENSCATG00000009349	PLEC	100	93.581	Cercocebus_atys
ENSHGLG00000012646	PLEC	100	97.140	ENSCLAG00000012830	PLEC	100	97.140	Chinchilla_lanigera
ENSHGLG00000012646	PLEC	100	74.921	ENSCPBG00000021974	PLEC	99	73.911	Chrysemys_picta_bellii
ENSHGLG00000012646	PLEC	100	94.437	ENSCGRG00001019864	Plec	100	94.437	Cricetulus_griseus_chok1gshd
ENSHGLG00000012646	PLEC	100	93.815	ENSCGRG00000002714	Plec	100	93.815	Cricetulus_griseus_crigri
ENSHGLG00000012646	PLEC	96	90.244	ENSDNOG00000031742	PLEC	99	90.244	Dasypus_novemcinctus
ENSHGLG00000012646	PLEC	79	93.694	ENSETEG00000015535	-	62	93.694	Echinops_telfairi
ENSHGLG00000012646	PLEC	85	95.872	ENSEEUG00000004554	-	67	96.177	Erinaceus_europaeus
ENSHGLG00000012646	PLEC	100	92.061	ENSFCAG00000042897	PLEC	100	92.061	Felis_catus
ENSHGLG00000012646	PLEC	100	97.909	ENSFDAG00000011856	PLEC	100	97.909	Fukomys_damarensis
ENSHGLG00000012646	PLEC	100	88.226	ENSGGOG00000012217	PLEC	100	90.777	Gorilla_gorilla
ENSHGLG00000012646	PLEC	100	87.251	ENSHGLG00100011759	PLEC	100	87.146	Heterocephalus_glaber_male
ENSHGLG00000012646	PLEC	100	93.362	ENSSTOG00000023061	PLEC	100	93.340	Ictidomys_tridecemlineatus
ENSHGLG00000012646	PLEC	100	94.306	ENSJJAG00000012390	Plec	100	94.327	Jaculus_jaculus
ENSHGLG00000012646	PLEC	100	93.538	ENSMFAG00000032066	PLEC	100	93.538	Macaca_fascicularis
ENSHGLG00000012646	PLEC	100	89.932	ENSMMUG00000000388	PLEC	100	90.336	Macaca_mulatta
ENSHGLG00000012646	PLEC	100	93.538	ENSMNEG00000011406	PLEC	100	93.538	Macaca_nemestrina
ENSHGLG00000012646	PLEC	97	89.717	ENSMLEG00000033296	PLEC	100	93.036	Mandrillus_leucophaeus
ENSHGLG00000012646	PLEC	100	94.224	ENSMAUG00000001116	Plec	100	94.224	Mesocricetus_auratus
ENSHGLG00000012646	PLEC	100	93.711	ENSMICG00000016160	PLEC	100	93.711	Microcebus_murinus
ENSHGLG00000012646	PLEC	100	94.346	ENSMOCG00000000674	Plec	100	94.346	Microtus_ochrogaster
ENSHGLG00000012646	PLEC	100	94.389	MGP_CAROLIEiJ_G0019913	Plec	100	95.021	Mus_caroli
ENSHGLG00000012646	PLEC	100	94.346	ENSMUSG00000022565	Plec	100	95.228	Mus_musculus
ENSHGLG00000012646	PLEC	100	94.303	MGP_PahariEiJ_G0019923	Plec	100	95.228	Mus_pahari
ENSHGLG00000012646	PLEC	100	94.367	MGP_SPRETEiJ_G0020816	Plec	100	95.124	Mus_spretus
ENSHGLG00000012646	PLEC	100	90.034	ENSMPUG00000007329	PLEC	100	90.120	Mustela_putorius_furo
ENSHGLG00000012646	PLEC	100	94.815	ENSNGAG00000008931	Plec	100	94.815	Nannospalax_galili
ENSHGLG00000012646	PLEC	99	92.888	ENSMEUG00000004499	-	70	92.888	Notamacropus_eugenii
ENSHGLG00000012646	PLEC	91	91.781	ENSOPRG00000015206	PLEC	69	91.781	Ochotona_princeps
ENSHGLG00000012646	PLEC	93	78.571	ENSOARG00000015846	-	100	79.482	Ovis_aries
ENSHGLG00000012646	PLEC	100	84.188	ENSPPAG00000042112	PLEC	100	85.705	Pan_paniscus
ENSHGLG00000012646	PLEC	100	93.197	ENSPTRG00000020672	PLEC	100	93.197	Pan_troglodytes
ENSHGLG00000012646	PLEC	100	93.410	ENSPANG00000023403	-	100	93.410	Papio_anubis
ENSHGLG00000012646	PLEC	100	94.528	ENSPEMG00000011922	Plec	100	94.528	Peromyscus_maniculatus_bairdii
ENSHGLG00000012646	PLEC	100	82.811	ENSPCIG00000014981	PLEC	99	83.373	Phascolarctos_cinereus
ENSHGLG00000012646	PLEC	100	93.538	ENSPCOG00000023279	PLEC	100	93.538	Propithecus_coquereli
ENSHGLG00000012646	PLEC	100	92.463	ENSPVAG00000009376	PLEC	91	92.685	Pteropus_vampyrus
ENSHGLG00000012646	PLEC	100	94.518	ENSRNOG00000023781	Plec	100	94.518	Rattus_norvegicus
ENSHGLG00000012646	PLEC	100	84.836	ENSRBIG00000041068	PLEC	61	83.767	Rhinopithecus_bieti
ENSHGLG00000012646	PLEC	100	93.427	ENSRROG00000015881	PLEC	100	93.427	Rhinopithecus_roxellana
ENSHGLG00000012646	PLEC	100	90.872	ENSSBOG00000025259	PLEC	100	90.872	Saimiri_boliviensis_boliviensis
ENSHGLG00000012646	PLEC	99	77.690	ENSSHAG00000009020	PLEC	99	79.539	Sarcophilus_harrisii
ENSHGLG00000012646	PLEC	97	89.443	ENSTTRG00000010427	PLEC	95	89.443	Tursiops_truncatus
ENSHGLG00000012646	PLEC	100	91.622	ENSVVUG00000010214	PLEC	100	91.622	Vulpes_vulpes