EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSHGLG00000012782 (Gene tree)
Gene ID
-
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Heterocephalus_glaber_female
Status
putative
Strand
Plus strand
Length
25462 bases
Position
chrJH602060.1:13291071-13316532
Accession
101698816
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSHGLP00000017847RRM_1PF00076.225.5e-3412
ENSHGLP00000017847RRM_1PF00076.225.5e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSHGLT00000018024-4880XM_004843669ENSHGLP00000017847362 (aa)XP_004843726A0A0P6JLU7
Gene Model
Click here to download ENSHGLG00000012782's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000012782's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSHGLG00000012782MSI15139.901ENSHGLG00000012306-7440.566
ENSHGLG00000012782MSI15042.308ENSHGLG00000003139HNRNPA17539.004
ENSHGLG00000012782MSI15239.037ENSHGLG00000014107-6536.864
ENSHGLG00000012782MSI15035.000ENSHGLG00000015610-6834.021
ENSHGLG00000012782MSI15047.222ENSHGLG00000015791HNRNPDL5739.271
ENSHGLG00000012782MSI15146.524ENSHGLG00000013420-5747.429
ENSHGLG00000012782MSI15632.911ENSHGLG00000018325-6531.818
ENSHGLG00000012782MSI15246.032ENSHGLG00000014427-7947.222
ENSHGLG00000012782MSI15241.827ENSHGLG00000017518DAZAP15341.827
ENSHGLG00000012782MSI15034.932ENSHGLG00000018967TARDBP6733.133
ENSHGLG00000012782MSI15039.560ENSHGLG00000019948-7636.929
ENSHGLG00000012782MSI15241.969ENSHGLG00000007599-5542.188
ENSHGLG00000012782MSI15340.758ENSHGLG00000014445-5740.758
ENSHGLG00000012782MSI15144.041ENSHGLG00000004214HNRNPD7340.161
ENSHGLG00000012782MSI15140.686ENSHGLG00000005451HNRNPA36741.509
ENSHGLG00000012782MSI15039.011ENSHGLG00000018499-7835.409
ENSHGLG00000012782MSI15047.222ENSHGLG00000014490HNRNPAB7540.551
ENSHGLG00000012782MSI19660.745ENSHGLG00000012444MSI29662.994
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSHGLG00000012782MSI110099.724ENSG00000135097MSI110099.724Homo_sapiens
ENSHGLG00000012782MSI110083.516ENSAPOG00000003191MSI110083.516Acanthochromis_polyacanthus
ENSHGLG00000012782MSI110083.978ENSAPOG00000023458-10083.978Acanthochromis_polyacanthus
ENSHGLG00000012782MSI19881.102ENSAMEG00000013302MSI110081.102Ailuropoda_melanoleuca
ENSHGLG00000012782MSI19182.371ENSACIG00000017754-7882.371Amphilophus_citrinellus
ENSHGLG00000012782MSI19877.193ENSAOCG00000009031-9577.485Amphiprion_ocellaris
ENSHGLG00000012782MSI110083.516ENSAOCG00000003804MSI110083.516Amphiprion_ocellaris
ENSHGLG00000012782MSI110083.516ENSAPEG00000003245MSI110083.516Amphiprion_percula
ENSHGLG00000012782MSI110083.978ENSAPEG00000006857-8483.978Amphiprion_percula
ENSHGLG00000012782MSI110080.163ENSATEG00000017059MSI110080.163Anabas_testudineus
ENSHGLG00000012782MSI110078.142ENSATEG00000023779-10078.142Anabas_testudineus
ENSHGLG00000012782MSI110096.143ENSACAG00000002762MSI110096.143Anolis_carolinensis
ENSHGLG00000012782MSI18295.973ENSANAG00000027901-9295.973Aotus_nancymaae
ENSHGLG00000012782MSI110099.724ENSANAG00000027151MSI110099.724Aotus_nancymaae
ENSHGLG00000012782MSI110082.967ENSACLG00000011230MSI110082.967Astatotilapia_calliptera
ENSHGLG00000012782MSI110083.702ENSACLG00000000117-10085.044Astatotilapia_calliptera
ENSHGLG00000012782MSI19483.434ENSAMXG00000038960msi17683.434Astyanax_mexicanus
ENSHGLG00000012782MSI110099.724ENSBTAG00000009800MSI110099.724Bos_taurus
ENSHGLG00000012782MSI110099.724ENSCJAG00000008578MSI110099.724Callithrix_jacchus
ENSHGLG00000012782MSI110099.448ENSCAFG00000010283MSI110099.448Canis_familiaris
ENSHGLG00000012782MSI19499.678ENSCAFG00020020585MSI110099.678Canis_lupus_dingo
ENSHGLG00000012782MSI110094.309ENSCHIG00000024304MSI110094.309Capra_hircus
ENSHGLG00000012782MSI19899.694ENSTSYG00000033949MSI19599.694Carlito_syrichta
ENSHGLG00000012782MSI19489.457ENSCAPG00000003919MSI18989.457Cavia_aperea
ENSHGLG00000012782MSI19899.708ENSCPOG00000012361MSI110099.708Cavia_porcellus
ENSHGLG00000012782MSI110099.724ENSCCAG00000035567MSI110099.724Cebus_capucinus
ENSHGLG00000012782MSI110099.724ENSCATG00000030019MSI110099.724Cercocebus_atys
ENSHGLG00000012782MSI19899.708ENSCLAG00000011329MSI110099.708Chinchilla_lanigera
ENSHGLG00000012782MSI17596.029ENSCSAG00000002265MSI19696.029Chlorocebus_sabaeus
ENSHGLG00000012782MSI110095.580ENSCPBG00000011349MSI110095.580Chrysemys_picta_bellii
ENSHGLG00000012782MSI19899.695ENSCANG00000040651MSI110099.695Colobus_angolensis_palliatus
ENSHGLG00000012782MSI110099.724ENSCGRG00001018883Msi110099.724Cricetulus_griseus_chok1gshd
ENSHGLG00000012782MSI19499.696ENSCGRG00000002191Msi17299.696Cricetulus_griseus_crigri
ENSHGLG00000012782MSI110083.242ENSCSEG00000005834-10083.242Cynoglossus_semilaevis
ENSHGLG00000012782MSI110082.873ENSCSEG00000008352-10082.873Cynoglossus_semilaevis
ENSHGLG00000012782MSI19878.006ENSCSEG00000011032MSI110078.006Cynoglossus_semilaevis
ENSHGLG00000012782MSI16468.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSHGLG00000012782MSI110083.978ENSCVAG00000009100MSI110083.978Cyprinodon_variegatus
ENSHGLG00000012782MSI18081.659ENSDARG00000102015CABZ01037298.18981.659Danio_rerio
ENSHGLG00000012782MSI19881.098ENSDARG00000010710msi110084.581Danio_rerio
ENSHGLG00000012782MSI19889.666ENSDNOG00000005713MSI19189.666Dasypus_novemcinctus
ENSHGLG00000012782MSI19898.802ENSDORG00000005610Msi19995.198Dipodomys_ordii
ENSHGLG00000012782MSI19495.427ENSETEG00000004756MSI110095.427Echinops_telfairi
ENSHGLG00000012782MSI110099.724ENSEASG00005004736MSI110099.724Equus_asinus_asinus
ENSHGLG00000012782MSI110099.724ENSECAG00000017526MSI110099.724Equus_caballus
ENSHGLG00000012782MSI19480.110ENSELUG00000023219MSI19280.110Esox_lucius
ENSHGLG00000012782MSI19480.938ENSELUG00000023280-10080.645Esox_lucius
ENSHGLG00000012782MSI110099.724ENSFCAG00000011007MSI110099.724Felis_catus
ENSHGLG00000012782MSI19895.498ENSFALG00000007574MSI110095.498Ficedula_albicollis
ENSHGLG00000012782MSI198100.000ENSFDAG00000019586MSI1100100.000Fukomys_damarensis
ENSHGLG00000012782MSI110083.516ENSFHEG00000003560-10083.516Fundulus_heteroclitus
ENSHGLG00000012782MSI110084.254ENSFHEG00000022446MSI110084.254Fundulus_heteroclitus
ENSHGLG00000012782MSI110076.309ENSGMOG00000017838-10076.309Gadus_morhua
ENSHGLG00000012782MSI110082.320ENSGMOG00000001006MSI19982.044Gadus_morhua
ENSHGLG00000012782MSI19494.872ENSGALG00000007227MSI19886.701Gallus_gallus
ENSHGLG00000012782MSI110064.932ENSGAFG00000005860-10064.932Gambusia_affinis
ENSHGLG00000012782MSI19885.088ENSGAFG00000021522MSI19485.088Gambusia_affinis
ENSHGLG00000012782MSI110083.149ENSGACG00000012679MSI110083.149Gasterosteus_aculeatus
ENSHGLG00000012782MSI110080.387ENSGACG00000008674-10080.387Gasterosteus_aculeatus
ENSHGLG00000012782MSI110095.304ENSGAGG00000016037MSI110095.304Gopherus_agassizii
ENSHGLG00000012782MSI19499.682ENSGGOG00000010328MSI110099.682Gorilla_gorilla
ENSHGLG00000012782MSI110082.967ENSHBUG00000021921MSI110082.967Haplochromis_burtoni
ENSHGLG00000012782MSI110083.702ENSHBUG00000011841-10083.702Haplochromis_burtoni
ENSHGLG00000012782MSI198100.000ENSHGLG00100016848MSI1100100.000Heterocephalus_glaber_male
ENSHGLG00000012782MSI110078.415ENSHCOG00000012067-10078.415Hippocampus_comes
ENSHGLG00000012782MSI19880.645ENSHCOG00000012019MSI110080.645Hippocampus_comes
ENSHGLG00000012782MSI110082.044ENSIPUG00000001976msi110082.044Ictalurus_punctatus
ENSHGLG00000012782MSI19499.678ENSSTOG00000009799MSI110099.678Ictidomys_tridecemlineatus
ENSHGLG00000012782MSI110099.724ENSJJAG00000010463Msi110099.724Jaculus_jaculus
ENSHGLG00000012782MSI110084.254ENSJJAG00000010643-10083.978Jaculus_jaculus
ENSHGLG00000012782MSI19883.284ENSKMAG00000019877-10083.284Kryptolebias_marmoratus
ENSHGLG00000012782MSI110083.425ENSKMAG00000011251MSI110083.425Kryptolebias_marmoratus
ENSHGLG00000012782MSI110082.967ENSLBEG00000001375-10082.967Labrus_bergylta
ENSHGLG00000012782MSI110083.978ENSLBEG00000008789MSI110083.978Labrus_bergylta
ENSHGLG00000012782MSI19887.135ENSLACG00000018287MSI110087.135Latimeria_chalumnae
ENSHGLG00000012782MSI15070.000ENSLOCG00000008618zgc:1107967170.000Lepisosteus_oculatus
ENSHGLG00000012782MSI19189.124ENSLAFG00000009412MSI110089.124Loxodonta_africana
ENSHGLG00000012782MSI19899.708ENSMFAG00000001798MSI110099.708Macaca_fascicularis
ENSHGLG00000012782MSI19798.006ENSMMUG00000031527MSI19798.006Macaca_mulatta
ENSHGLG00000012782MSI110099.724ENSMNEG00000040034MSI110099.724Macaca_nemestrina
ENSHGLG00000012782MSI19899.695ENSMLEG00000003921MSI110099.695Mandrillus_leucophaeus
ENSHGLG00000012782MSI19685.673ENSMAMG00000018426-10083.516Mastacembelus_armatus
ENSHGLG00000012782MSI110083.149ENSMAMG00000002279MSI110083.149Mastacembelus_armatus
ENSHGLG00000012782MSI110083.702ENSMZEG00005000340-10083.702Maylandia_zebra
ENSHGLG00000012782MSI110082.967ENSMZEG00005026892MSI110082.967Maylandia_zebra
ENSHGLG00000012782MSI16498.225ENSMGAG00000016518-10098.225Meleagris_gallopavo
ENSHGLG00000012782MSI17199.588ENSMAUG00000016820Msi110099.588Mesocricetus_auratus
ENSHGLG00000012782MSI110099.724ENSMICG00000033181MSI110099.724Microcebus_murinus
ENSHGLG00000012782MSI110099.448ENSMOCG00000002286Msi110099.448Microtus_ochrogaster
ENSHGLG00000012782MSI19876.023ENSMMOG00000010492MSI19476.023Mola_mola
ENSHGLG00000012782MSI19881.269ENSMMOG00000012265-9980.119Mola_mola
ENSHGLG00000012782MSI19167.771ENSMODG00000003189-10067.771Monodelphis_domestica
ENSHGLG00000012782MSI110083.702ENSMALG00000017889MSI110083.702Monopterus_albus
ENSHGLG00000012782MSI19884.751ENSMALG00000001426-10084.751Monopterus_albus
ENSHGLG00000012782MSI110099.171MGP_CAROLIEiJ_G0027626Msi110099.171Mus_caroli
ENSHGLG00000012782MSI110099.171ENSMUSG00000054256Msi110099.171Mus_musculus
ENSHGLG00000012782MSI110098.895MGP_PahariEiJ_G0024206Msi110098.895Mus_pahari
ENSHGLG00000012782MSI110099.171MGP_SPRETEiJ_G0028624Msi110099.171Mus_spretus
ENSHGLG00000012782MSI19499.678ENSMPUG00000003168MSI110099.678Mustela_putorius_furo
ENSHGLG00000012782MSI19489.881ENSMLUG00000010313MSI110089.881Myotis_lucifugus
ENSHGLG00000012782MSI19893.575ENSNGAG00000014508Msi19793.575Nannospalax_galili
ENSHGLG00000012782MSI18877.043ENSNBRG00000018012MSI19977.043Neolamprologus_brichardi
ENSHGLG00000012782MSI110083.702ENSNBRG00000000841-10083.702Neolamprologus_brichardi
ENSHGLG00000012782MSI19189.329ENSNLEG00000015636MSI110089.329Nomascus_leucogenys
ENSHGLG00000012782MSI19477.744ENSMEUG00000015759MSI110077.744Notamacropus_eugenii
ENSHGLG00000012782MSI19491.746ENSOPRG00000016879MSI110091.746Ochotona_princeps
ENSHGLG00000012782MSI19899.695ENSODEG00000006328MSI110099.695Octodon_degus
ENSHGLG00000012782MSI110083.242ENSONIG00000019452-10083.242Oreochromis_niloticus
ENSHGLG00000012782MSI110083.702ENSONIG00000011182MSI110083.702Oreochromis_niloticus
ENSHGLG00000012782MSI19499.357ENSOCUG00000027716MSI110099.357Oryctolagus_cuniculus
ENSHGLG00000012782MSI110084.254ENSORLG00000019978-10084.254Oryzias_latipes
ENSHGLG00000012782MSI110083.516ENSORLG00000029593MSI110083.516Oryzias_latipes
ENSHGLG00000012782MSI110083.516ENSORLG00020008266MSI19982.749Oryzias_latipes_hni
ENSHGLG00000012782MSI110084.254ENSORLG00020001208-7184.254Oryzias_latipes_hni
ENSHGLG00000012782MSI110083.516ENSORLG00015003916MSI110083.516Oryzias_latipes_hsok
ENSHGLG00000012782MSI110084.254ENSORLG00015013672-7680.939Oryzias_latipes_hsok
ENSHGLG00000012782MSI110084.530ENSOMEG00000017536MSI110084.530Oryzias_melastigma
ENSHGLG00000012782MSI19886.550ENSOMEG00000002272-10084.341Oryzias_melastigma
ENSHGLG00000012782MSI19995.330ENSOGAG00000003847MSI19995.330Otolemur_garnettii
ENSHGLG00000012782MSI19495.758ENSOARG00000012097MSI110095.758Ovis_aries
ENSHGLG00000012782MSI19899.695ENSPPAG00000043073MSI110099.695Pan_paniscus
ENSHGLG00000012782MSI110099.724ENSPPRG00000000370MSI110099.724Panthera_pardus
ENSHGLG00000012782MSI19499.678ENSPTIG00000008913MSI110099.678Panthera_tigris_altaica
ENSHGLG00000012782MSI110099.724ENSPTRG00000005531MSI110099.724Pan_troglodytes
ENSHGLG00000012782MSI110099.448ENSPANG00000006335MSI110099.448Papio_anubis
ENSHGLG00000012782MSI19686.167ENSPKIG00000023575-10084.254Paramormyrops_kingsleyae
ENSHGLG00000012782MSI110084.807ENSPKIG00000016497MSI110084.807Paramormyrops_kingsleyae
ENSHGLG00000012782MSI19891.813ENSPSIG00000011608-9391.813Pelodiscus_sinensis
ENSHGLG00000012782MSI18092.140ENSPSIG00000009621-10092.140Pelodiscus_sinensis
ENSHGLG00000012782MSI19481.459ENSPMGG00000000514MSI19781.459Periophthalmus_magnuspinnatus
ENSHGLG00000012782MSI19470.930ENSPMGG00000007743-8971.304Periophthalmus_magnuspinnatus
ENSHGLG00000012782MSI19994.678ENSPEMG00000010491Msi19994.678Peromyscus_maniculatus_bairdii
ENSHGLG00000012782MSI110083.978ENSPFOG00000013113MSI110083.978Poecilia_formosa
ENSHGLG00000012782MSI110083.516ENSPFOG00000008319-8683.516Poecilia_formosa
ENSHGLG00000012782MSI110083.516ENSPLAG00000012431-9783.516Poecilia_latipinna
ENSHGLG00000012782MSI110083.978ENSPLAG00000014025-10083.978Poecilia_latipinna
ENSHGLG00000012782MSI110083.978ENSPMEG00000012796MSI110083.978Poecilia_mexicana
ENSHGLG00000012782MSI110082.967ENSPMEG00000007025-9377.778Poecilia_mexicana
ENSHGLG00000012782MSI19877.966ENSPREG00000021416-9579.480Poecilia_reticulata
ENSHGLG00000012782MSI16278.125ENSPREG00000014574-10078.125Poecilia_reticulata
ENSHGLG00000012782MSI110098.895ENSPPYG00000005027MSI110098.895Pongo_abelii
ENSHGLG00000012782MSI19876.557ENSPCAG00000002300MSI110076.557Procavia_capensis
ENSHGLG00000012782MSI110099.724ENSPCOG00000017341MSI110099.724Propithecus_coquereli
ENSHGLG00000012782MSI19882.927ENSPVAG00000002225MSI110082.927Pteropus_vampyrus
ENSHGLG00000012782MSI110083.702ENSPNYG00000002529-10083.702Pundamilia_nyererei
ENSHGLG00000012782MSI110082.967ENSPNYG00000004379MSI110082.967Pundamilia_nyererei
ENSHGLG00000012782MSI110082.320ENSPNAG00000019337msi110082.320Pygocentrus_nattereri
ENSHGLG00000012782MSI19499.357ENSRNOG00000001156Msi110099.357Rattus_norvegicus
ENSHGLG00000012782MSI19499.678ENSRBIG00000036889MSI110099.678Rhinopithecus_bieti
ENSHGLG00000012782MSI19499.394ENSRROG00000041076MSI19399.394Rhinopithecus_roxellana
ENSHGLG00000012782MSI19899.708ENSSBOG00000030259MSI19899.708Saimiri_boliviensis_boliviensis
ENSHGLG00000012782MSI19487.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSHGLG00000012782MSI19488.304ENSSFOG00015005350MSI19688.304Scleropages_formosus
ENSHGLG00000012782MSI19886.550ENSSFOG00015014964-9586.550Scleropages_formosus
ENSHGLG00000012782MSI19485.455ENSSMAG00000009156-7185.455Scophthalmus_maximus
ENSHGLG00000012782MSI19881.459ENSSMAG00000018824MSI19781.459Scophthalmus_maximus
ENSHGLG00000012782MSI110083.978ENSSDUG00000001027MSI110083.978Seriola_dumerili
ENSHGLG00000012782MSI110083.242ENSSDUG00000022697-10083.242Seriola_dumerili
ENSHGLG00000012782MSI19880.665ENSSLDG00000018706-9781.928Seriola_lalandi_dorsalis
ENSHGLG00000012782MSI110083.978ENSSLDG00000016832MSI110083.978Seriola_lalandi_dorsalis
ENSHGLG00000012782MSI110094.751ENSSPUG00000015741MSI110094.751Sphenodon_punctatus
ENSHGLG00000012782MSI19885.924ENSSPAG00000013098-10085.924Stegastes_partitus
ENSHGLG00000012782MSI15274.375ENSSPAG00000015573zgc:1107968274.375Stegastes_partitus
ENSHGLG00000012782MSI16268.304ENSSPAG00000014085-10068.304Stegastes_partitus
ENSHGLG00000012782MSI110099.448ENSSSCG00000029365MSI110099.448Sus_scrofa
ENSHGLG00000012782MSI19896.491ENSTGUG00000009534MSI110096.491Taeniopygia_guttata
ENSHGLG00000012782MSI18180.519ENSTRUG00000016249MSI110073.408Takifugu_rubripes
ENSHGLG00000012782MSI19475.684ENSTRUG00000015636-7975.684Takifugu_rubripes
ENSHGLG00000012782MSI110078.904ENSTNIG00000011469MSI110078.904Tetraodon_nigroviridis
ENSHGLG00000012782MSI19862.432ENSTNIG00000019814-9962.432Tetraodon_nigroviridis
ENSHGLG00000012782MSI19489.011ENSTBEG00000007182MSI110089.011Tupaia_belangeri
ENSHGLG00000012782MSI19880.994ENSTTRG00000005663MSI110080.994Tursiops_truncatus
ENSHGLG00000012782MSI16892.237ENSUAMG00000015514MSI19492.237Ursus_americanus
ENSHGLG00000012782MSI19492.089ENSUMAG00000006176MSI19092.089Ursus_maritimus
ENSHGLG00000012782MSI19898.799ENSVVUG00000020993MSI110098.799Vulpes_vulpes
ENSHGLG00000012782MSI110090.934ENSXETG00000012216msi110090.984Xenopus_tropicalis
ENSHGLG00000012782MSI19471.637ENSXCOG00000017605MSI18971.637Xiphophorus_couchianus
ENSHGLG00000012782MSI110083.242ENSXMAG00000018237-10083.242Xiphophorus_maculatus
ENSHGLG00000012782MSI110083.978ENSXMAG00000027103MSI110073.713Xiphophorus_maculatus

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