EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000012806 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 10021 bases
Position: chrJH602099.1:4988823-4998843
Accession: 101700596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000017877	AARP2CN	PF08142.12	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000018054	-	2763	XM_004857154	ENSHGLP00000017877	804 (aa)	XP_004857211	G5BCU1

Gene Model

Click here to download ENSHGLG00000012806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000012806's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000012806	-	97	85.347	ENSHGLG00000015688	-	99	85.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000012806	-	100	87.717	ENSG00000167721	TSR1	100	88.337	Homo_sapiens
ENSHGLG00000012806	-	99	54.686	ENSAPOG00000020891	tsr1	99	55.276	Acanthochromis_polyacanthus
ENSHGLG00000012806	-	100	86.609	ENSAMEG00000007599	TSR1	99	86.118	Ailuropoda_melanoleuca
ENSHGLG00000012806	-	99	56.950	ENSACIG00000007090	tsr1	99	57.178	Amphilophus_citrinellus
ENSHGLG00000012806	-	99	54.708	ENSAOCG00000023284	tsr1	99	55.475	Amphiprion_ocellaris
ENSHGLG00000012806	-	94	55.373	ENSAPEG00000008452	tsr1	100	56.194	Amphiprion_percula
ENSHGLG00000012806	-	99	54.502	ENSATEG00000021961	tsr1	99	55.102	Anabas_testudineus
ENSHGLG00000012806	-	92	68.548	ENSAPLG00000013422	TSR1	100	68.817	Anas_platyrhynchos
ENSHGLG00000012806	-	70	56.897	ENSACAG00000000859	TSR1	92	57.069	Anolis_carolinensis
ENSHGLG00000012806	-	100	88.308	ENSANAG00000031071	TSR1	100	88.806	Aotus_nancymaae
ENSHGLG00000012806	-	99	56.386	ENSACLG00000007595	tsr1	99	56.506	Astatotilapia_calliptera
ENSHGLG00000012806	-	50	49.639	ENSAMXG00000008470	tsr1	90	48.956	Astyanax_mexicanus
ENSHGLG00000012806	-	100	90.299	ENSBTAG00000004225	TSR1	100	90.299	Bos_taurus
ENSHGLG00000012806	-	97	38.896	WBGene00006497	tag-151	96	39.196	Caenorhabditis_elegans
ENSHGLG00000012806	-	100	88.060	ENSCJAG00000012456	TSR1	100	88.557	Callithrix_jacchus
ENSHGLG00000012806	-	90	87.190	ENSCAFG00000019273	-	100	88.128	Canis_familiaris
ENSHGLG00000012806	-	100	87.702	ENSCAFG00000002106	-	100	87.702	Canis_familiaris
ENSHGLG00000012806	-	100	87.329	ENSCAFG00020009728	TSR1	100	87.329	Canis_lupus_dingo
ENSHGLG00000012806	-	100	90.796	ENSCHIG00000023935	TSR1	100	90.796	Capra_hircus
ENSHGLG00000012806	-	100	88.184	ENSTSYG00000005468	TSR1	100	88.308	Carlito_syrichta
ENSHGLG00000012806	-	93	92.091	ENSCPOG00000014833	TSR1	99	92.091	Cavia_porcellus
ENSHGLG00000012806	-	93	88.740	ENSCCAG00000028962	TSR1	98	89.276	Cebus_capucinus
ENSHGLG00000012806	-	100	87.717	ENSCATG00000044262	TSR1	100	88.213	Cercocebus_atys
ENSHGLG00000012806	-	100	92.040	ENSCLAG00000005567	TSR1	100	92.164	Chinchilla_lanigera
ENSHGLG00000012806	-	100	87.717	ENSCSAG00000013788	TSR1	100	88.213	Chlorocebus_sabaeus
ENSHGLG00000012806	-	99	68.290	ENSCPBG00000020363	TSR1	97	69.059	Chrysemys_picta_bellii
ENSHGLG00000012806	-	97	46.222	ENSCING00000020658	-	99	46.096	Ciona_intestinalis
ENSHGLG00000012806	-	97	45.477	ENSCSAVG00000001875	-	100	44.875	Ciona_savignyi
ENSHGLG00000012806	-	100	77.627	ENSCANG00000033056	TSR1	100	77.543	Colobus_angolensis_palliatus
ENSHGLG00000012806	-	100	85.217	ENSCGRG00001023942	Tsr1	100	86.460	Cricetulus_griseus_chok1gshd
ENSHGLG00000012806	-	100	79.229	ENSCGRG00000013015	Tsr1	100	81.095	Cricetulus_griseus_crigri
ENSHGLG00000012806	-	99	54.633	ENSCSEG00000013009	tsr1	99	56.000	Cynoglossus_semilaevis
ENSHGLG00000012806	-	99	55.327	ENSCVAG00000000506	tsr1	99	55.448	Cyprinodon_variegatus
ENSHGLG00000012806	-	99	54.152	ENSDARG00000007744	tsr1	99	54.712	Danio_rerio
ENSHGLG00000012806	-	100	88.806	ENSDNOG00000004715	TSR1	100	89.296	Dasypus_novemcinctus
ENSHGLG00000012806	-	100	86.443	ENSDORG00000016371	-	100	86.443	Dipodomys_ordii
ENSHGLG00000012806	-	97	74.679	ENSDORG00000023234	-	100	74.679	Dipodomys_ordii
ENSHGLG00000012806	-	97	44.678	FBgn0037073	Tsr1	96	45.285	Drosophila_melanogaster
ENSHGLG00000012806	-	92	90.492	ENSETEG00000017534	TSR1	91	90.492	Echinops_telfairi
ENSHGLG00000012806	-	96	53.101	ENSEBUG00000013731	TSR1	98	52.972	Eptatretus_burgeri
ENSHGLG00000012806	-	100	90.423	ENSEASG00005009302	TSR1	97	90.423	Equus_asinus_asinus
ENSHGLG00000012806	-	100	90.299	ENSECAG00000009114	TSR1	100	90.299	Equus_caballus
ENSHGLG00000012806	-	99	54.556	ENSELUG00000020984	tsr1	95	55.127	Esox_lucius
ENSHGLG00000012806	-	100	89.055	ENSFCAG00000006313	TSR1	100	89.055	Felis_catus
ENSHGLG00000012806	-	99	68.765	ENSFALG00000006532	TSR1	99	69.259	Ficedula_albicollis
ENSHGLG00000012806	-	100	93.905	ENSFDAG00000006038	TSR1	100	94.403	Fukomys_damarensis
ENSHGLG00000012806	-	99	54.589	ENSFHEG00000003626	tsr1	99	55.808	Fundulus_heteroclitus
ENSHGLG00000012806	-	99	52.580	ENSGMOG00000010336	tsr1	99	53.309	Gadus_morhua
ENSHGLG00000012806	-	99	54.317	ENSGAFG00000012993	tsr1	99	54.819	Gambusia_affinis
ENSHGLG00000012806	-	99	54.701	ENSGACG00000010843	tsr1	99	55.311	Gasterosteus_aculeatus
ENSHGLG00000012806	-	99	68.922	ENSGAGG00000025619	-	99	69.068	Gopherus_agassizii
ENSHGLG00000012806	-	100	87.965	ENSGGOG00000001704	TSR1	100	88.462	Gorilla_gorilla
ENSHGLG00000012806	-	99	56.303	ENSHBUG00000017904	tsr1	100	56.688	Haplochromis_burtoni
ENSHGLG00000012806	-	100	100.000	ENSHGLG00100015392	TSR1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000012806	-	99	56.683	ENSHCOG00000001432	tsr1	99	56.559	Hippocampus_comes
ENSHGLG00000012806	-	99	54.458	ENSIPUG00000004618	tsr1	99	55.355	Ictalurus_punctatus
ENSHGLG00000012806	-	100	87.841	ENSSTOG00000011819	TSR1	100	88.337	Ictidomys_tridecemlineatus
ENSHGLG00000012806	-	92	79.810	ENSJJAG00000019505	Tsr1	95	79.240	Jaculus_jaculus
ENSHGLG00000012806	-	99	54.874	ENSKMAG00000005763	tsr1	99	55.609	Kryptolebias_marmoratus
ENSHGLG00000012806	-	99	54.448	ENSLBEG00000021823	tsr1	99	55.396	Labrus_bergylta
ENSHGLG00000012806	-	99	64.015	ENSLACG00000002197	TSR1	99	63.892	Latimeria_chalumnae
ENSHGLG00000012806	-	82	58.420	ENSLOCG00000006491	TSR1	88	58.569	Lepisosteus_oculatus
ENSHGLG00000012806	-	100	87.965	ENSMFAG00000021330	TSR1	100	88.462	Macaca_fascicularis
ENSHGLG00000012806	-	100	87.717	ENSMMUG00000017519	TSR1	100	88.213	Macaca_mulatta
ENSHGLG00000012806	-	100	87.593	ENSMNEG00000031382	TSR1	100	88.089	Macaca_nemestrina
ENSHGLG00000012806	-	100	87.593	ENSMLEG00000036733	TSR1	100	88.089	Mandrillus_leucophaeus
ENSHGLG00000012806	-	99	54.773	ENSMAMG00000017918	tsr1	99	54.773	Mastacembelus_armatus
ENSHGLG00000012806	-	99	56.522	ENSMZEG00005007477	tsr1	99	56.643	Maylandia_zebra
ENSHGLG00000012806	-	99	67.407	ENSMGAG00000005576	TSR1	99	67.901	Meleagris_gallopavo
ENSHGLG00000012806	-	100	90.050	ENSMICG00000012943	TSR1	100	90.050	Microcebus_murinus
ENSHGLG00000012806	-	100	84.596	ENSMOCG00000022764	Tsr1	100	85.590	Microtus_ochrogaster
ENSHGLG00000012806	-	99	54.808	ENSMMOG00000014280	tsr1	99	56.136	Mola_mola
ENSHGLG00000012806	-	100	77.764	ENSMODG00000010658	TSR1	100	77.764	Monodelphis_domestica
ENSHGLG00000012806	-	99	55.222	ENSMALG00000011681	tsr1	99	55.582	Monopterus_albus
ENSHGLG00000012806	-	100	85.697	MGP_CAROLIEiJ_G0016727	Tsr1	100	85.821	Mus_caroli
ENSHGLG00000012806	-	100	86.318	ENSMUSG00000038335	Tsr1	100	86.443	Mus_musculus
ENSHGLG00000012806	-	100	86.318	MGP_PahariEiJ_G0017864	Tsr1	100	86.443	Mus_pahari
ENSHGLG00000012806	-	100	86.443	MGP_SPRETEiJ_G0017570	Tsr1	100	86.567	Mus_spretus
ENSHGLG00000012806	-	82	86.890	ENSMPUG00000013000	TSR1	100	86.890	Mustela_putorius_furo
ENSHGLG00000012806	-	100	90.547	ENSMLUG00000003505	TSR1	100	90.547	Myotis_lucifugus
ENSHGLG00000012806	-	99	56.115	ENSNBRG00000020728	tsr1	99	56.235	Neolamprologus_brichardi
ENSHGLG00000012806	-	100	79.104	ENSNLEG00000017184	TSR1	100	82.090	Nomascus_leucogenys
ENSHGLG00000012806	-	100	71.464	ENSMEUG00000015828	TSR1	100	71.658	Notamacropus_eugenii
ENSHGLG00000012806	-	99	56.780	ENSONIG00000013131	tsr1	99	55.772	Oreochromis_niloticus
ENSHGLG00000012806	-	94	72.011	ENSOANG00000008637	TSR1	100	71.337	Ornithorhynchus_anatinus
ENSHGLG00000012806	-	100	87.811	ENSOCUG00000014256	TSR1	100	87.811	Oryctolagus_cuniculus
ENSHGLG00000012806	-	99	54.633	ENSORLG00000004926	tsr1	99	55.716	Oryzias_latipes
ENSHGLG00000012806	-	99	54.699	ENSORLG00020008792	tsr1	99	56.024	Oryzias_latipes_hni
ENSHGLG00000012806	-	99	54.513	ENSORLG00015013838	tsr1	99	55.836	Oryzias_latipes_hsok
ENSHGLG00000012806	-	99	55.288	ENSOMEG00000004830	tsr1	99	55.995	Oryzias_melastigma
ENSHGLG00000012806	-	100	86.806	ENSOGAG00000004492	TSR1	100	87.300	Otolemur_garnettii
ENSHGLG00000012806	-	100	90.547	ENSOARG00000015437	TSR1	97	90.547	Ovis_aries
ENSHGLG00000012806	-	100	87.717	ENSPPAG00000036355	TSR1	100	88.337	Pan_paniscus
ENSHGLG00000012806	-	100	88.806	ENSPPRG00000015519	-	100	88.806	Panthera_pardus
ENSHGLG00000012806	-	100	89.055	ENSPTIG00000010608	TSR1	100	89.055	Panthera_tigris_altaica
ENSHGLG00000012806	-	100	87.717	ENSPTRG00000008547	TSR1	100	88.337	Pan_troglodytes
ENSHGLG00000012806	-	100	84.367	ENSPANG00000024463	TSR1	100	85.236	Papio_anubis
ENSHGLG00000012806	-	99	55.155	ENSPKIG00000013972	tsr1	99	55.080	Paramormyrops_kingsleyae
ENSHGLG00000012806	-	88	68.362	ENSPSIG00000018258	TSR1	100	68.503	Pelodiscus_sinensis
ENSHGLG00000012806	-	99	57.442	ENSPMGG00000011577	tsr1	99	57.934	Periophthalmus_magnuspinnatus
ENSHGLG00000012806	-	100	84.950	ENSPEMG00000018033	Tsr1	100	85.323	Peromyscus_maniculatus_bairdii
ENSHGLG00000012806	-	100	77.792	ENSPCIG00000009357	TSR1	98	78.492	Phascolarctos_cinereus
ENSHGLG00000012806	-	99	54.623	ENSPFOG00000004483	TSR1	99	55.718	Poecilia_formosa
ENSHGLG00000012806	-	99	54.736	ENSPLAG00000022320	tsr1	99	55.283	Poecilia_latipinna
ENSHGLG00000012806	-	99	54.491	ENSPMEG00000004577	tsr1	99	55.329	Poecilia_mexicana
ENSHGLG00000012806	-	97	54.084	ENSPREG00000010354	tsr1	95	55.542	Poecilia_reticulata
ENSHGLG00000012806	-	100	79.877	ENSPPYG00000007792	TSR1	100	80.370	Pongo_abelii
ENSHGLG00000012806	-	52	88.372	ENSPCAG00000012973	-	72	88.372	Procavia_capensis
ENSHGLG00000012806	-	100	90.174	ENSPCOG00000017928	TSR1	100	90.174	Propithecus_coquereli
ENSHGLG00000012806	-	100	89.428	ENSPVAG00000002162	TSR1	100	89.925	Pteropus_vampyrus
ENSHGLG00000012806	-	99	56.386	ENSPNYG00000016163	tsr1	99	56.506	Pundamilia_nyererei
ENSHGLG00000012806	-	99	53.286	ENSPNAG00000008659	tsr1	99	53.644	Pygocentrus_nattereri
ENSHGLG00000012806	-	100	85.093	ENSRNOG00000002980	Tsr1	100	85.217	Rattus_norvegicus
ENSHGLG00000012806	-	100	87.717	ENSRBIG00000040016	TSR1	100	88.089	Rhinopithecus_bieti
ENSHGLG00000012806	-	100	87.717	ENSRROG00000030361	TSR1	100	88.089	Rhinopithecus_roxellana
ENSHGLG00000012806	-	96	31.081	YDL060W	-	98	31.304	Saccharomyces_cerevisiae
ENSHGLG00000012806	-	100	88.060	ENSSBOG00000020785	TSR1	100	88.682	Saimiri_boliviensis_boliviensis
ENSHGLG00000012806	-	100	76.733	ENSSHAG00000011394	TSR1	100	76.828	Sarcophilus_harrisii
ENSHGLG00000012806	-	99	57.528	ENSSFOG00015005455	tsr1	99	57.160	Scleropages_formosus
ENSHGLG00000012806	-	99	54.286	ENSSMAG00000009504	tsr1	99	55.423	Scophthalmus_maximus
ENSHGLG00000012806	-	99	54.622	ENSSDUG00000012074	tsr1	99	55.102	Seriola_dumerili
ENSHGLG00000012806	-	99	55.755	ENSSLDG00000002031	tsr1	99	55.995	Seriola_lalandi_dorsalis
ENSHGLG00000012806	-	100	75.249	ENSSARG00000000759	TSR1	100	75.249	Sorex_araneus
ENSHGLG00000012806	-	99	67.774	ENSSPUG00000007042	TSR1	99	67.282	Sphenodon_punctatus
ENSHGLG00000012806	-	99	54.187	ENSSPAG00000021951	tsr1	99	55.263	Stegastes_partitus
ENSHGLG00000012806	-	100	90.423	ENSSSCG00000038534	TSR1	100	90.423	Sus_scrofa
ENSHGLG00000012806	-	90	71.096	ENSTGUG00000005883	TSR1	100	71.507	Taeniopygia_guttata
ENSHGLG00000012806	-	99	56.053	ENSTRUG00000004665	tsr1	99	56.901	Takifugu_rubripes
ENSHGLG00000012806	-	99	55.854	ENSTNIG00000016196	tsr1	99	56.029	Tetraodon_nigroviridis
ENSHGLG00000012806	-	67	90.769	ENSTBEG00000015275	-	67	90.769	Tupaia_belangeri
ENSHGLG00000012806	-	100	90.547	ENSTTRG00000001177	TSR1	100	90.547	Tursiops_truncatus
ENSHGLG00000012806	-	100	86.940	ENSUAMG00000025160	TSR1	99	87.537	Ursus_americanus
ENSHGLG00000012806	-	96	87.694	ENSUMAG00000009294	TSR1	98	87.694	Ursus_maritimus
ENSHGLG00000012806	-	84	86.181	ENSVPAG00000000228	TSR1	100	86.181	Vicugna_pacos
ENSHGLG00000012806	-	100	87.453	ENSVVUG00000021767	TSR1	100	87.453	Vulpes_vulpes
ENSHGLG00000012806	-	99	59.436	ENSXETG00000023797	tsr1	100	60.505	Xenopus_tropicalis
ENSHGLG00000012806	-	99	54.701	ENSXCOG00000009635	tsr1	99	55.678	Xiphophorus_couchianus
ENSHGLG00000012806	-	99	53.855	ENSXMAG00000001397	tsr1	96	55.060	Xiphophorus_maculatus