EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000012886 (Gene tree)
Gene ID: -
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 13994 bases
Position: chrJH602067.1:24856939-24870932
Accession: 101726746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000017988	tRNA-synt_1g	PF09334.11	7.1e-15	1	1
ENSHGLP00000017988	Anticodon_1	PF08264.13	4.6e-28	1	1
ENSHGLP00000017988	tRNA-synt_1	PF00133.22	1.9e-181	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000018165	VARS2-201	3315	XM_013072879	ENSHGLP00000017988	1104 (aa)	XP_012928333	UPI000A350F6D

Gene Model

Click here to download ENSHGLG00000012886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000012886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000012886	VARS2	94	50.000	ENSHGLG00000011646	VARS	83	49.716

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000012886	VARS2	90	51.172	ENSAPOG00000007396	vars2	96	50.094	Acanthochromis_polyacanthus
ENSHGLG00000012886	VARS2	96	81.955	ENSAMEG00000012997	VARS2	97	81.955	Ailuropoda_melanoleuca
ENSHGLG00000012886	VARS2	94	49.906	ENSACIG00000004344	vars2	99	49.812	Amphilophus_citrinellus
ENSHGLG00000012886	VARS2	90	50.829	ENSAOCG00000000476	vars2	97	50.047	Amphiprion_ocellaris
ENSHGLG00000012886	VARS2	90	50.829	ENSAPEG00000008646	vars2	95	49.813	Amphiprion_percula
ENSHGLG00000012886	VARS2	88	52.669	ENSATEG00000012291	vars2	96	51.205	Anabas_testudineus
ENSHGLG00000012886	VARS2	92	57.946	ENSACAG00000022093	VARS2	95	57.752	Anolis_carolinensis
ENSHGLG00000012886	VARS2	96	83.129	ENSANAG00000038018	VARS2	99	83.129	Aotus_nancymaae
ENSHGLG00000012886	VARS2	94	51.258	ENSACLG00000018673	vars2	99	51.165	Astatotilapia_calliptera
ENSHGLG00000012886	VARS2	92	52.567	ENSAMXG00000017773	vars2	98	54.105	Astyanax_mexicanus
ENSHGLG00000012886	VARS2	96	83.144	ENSBTAG00000010698	VARS2	99	83.129	Bos_taurus
ENSHGLG00000012886	VARS2	98	82.255	ENSCJAG00000019826	VARS2	99	83.223	Callithrix_jacchus
ENSHGLG00000012886	VARS2	97	80.297	ENSCAFG00000000454	VARS2	99	80.979	Canis_familiaris
ENSHGLG00000012886	VARS2	85	80.963	ENSCAFG00020019387	VARS2	95	81.023	Canis_lupus_dingo
ENSHGLG00000012886	VARS2	96	83.033	ENSCHIG00000007847	VARS2	99	82.941	Capra_hircus
ENSHGLG00000012886	VARS2	98	82.096	ENSTSYG00000009904	VARS2	99	82.752	Carlito_syrichta
ENSHGLG00000012886	VARS2	85	86.831	ENSCAPG00000017770	VARS2	100	86.831	Cavia_aperea
ENSHGLG00000012886	VARS2	97	85.343	ENSCPOG00000021834	VARS2	100	85.915	Cavia_porcellus
ENSHGLG00000012886	VARS2	97	83.458	ENSCCAG00000037907	VARS2	99	83.695	Cebus_capucinus
ENSHGLG00000012886	VARS2	98	83.981	ENSCATG00000032554	VARS2	99	84.543	Cercocebus_atys
ENSHGLG00000012886	VARS2	96	87.112	ENSCLAG00000002889	VARS2	100	87.112	Chinchilla_lanigera
ENSHGLG00000012886	VARS2	96	84.072	ENSCSAG00000008327	VARS2	99	84.072	Chlorocebus_sabaeus
ENSHGLG00000012886	VARS2	87	61.048	ENSCPBG00000021502	VARS2	96	60.946	Chrysemys_picta_bellii
ENSHGLG00000012886	VARS2	97	83.925	ENSCANG00000014991	VARS2	99	83.925	Colobus_angolensis_palliatus
ENSHGLG00000012886	VARS2	95	80.766	ENSCGRG00001021535	Vars2	99	80.642	Cricetulus_griseus_chok1gshd
ENSHGLG00000012886	VARS2	95	80.766	ENSCGRG00000014112	Vars2	99	80.642	Cricetulus_griseus_crigri
ENSHGLG00000012886	VARS2	84	56.125	ENSCSEG00000015432	vars2	90	66.667	Cynoglossus_semilaevis
ENSHGLG00000012886	VARS2	62	51.773	ENSCVAG00000017765	vars2	97	51.631	Cyprinodon_variegatus
ENSHGLG00000012886	VARS2	91	52.212	ENSDARG00000056717	vars2	95	52.212	Danio_rerio
ENSHGLG00000012886	VARS2	76	84.405	ENSDORG00000008516	Vars2	93	84.405	Dipodomys_ordii
ENSHGLG00000012886	VARS2	96	72.762	ENSETEG00000014844	VARS2	99	72.762	Echinops_telfairi
ENSHGLG00000012886	VARS2	97	83.693	ENSEASG00005019997	VARS2	99	81.792	Equus_asinus_asinus
ENSHGLG00000012886	VARS2	96	84.840	ENSECAG00000018202	VARS2	99	84.840	Equus_caballus
ENSHGLG00000012886	VARS2	60	75.728	ENSEEUG00000012591	-	63	75.728	Erinaceus_europaeus
ENSHGLG00000012886	VARS2	90	52.132	ENSELUG00000017824	vars2	96	51.552	Esox_lucius
ENSHGLG00000012886	VARS2	96	81.921	ENSFCAG00000010531	VARS2	99	81.921	Felis_catus
ENSHGLG00000012886	VARS2	96	89.087	ENSFDAG00000017216	VARS2	100	89.087	Fukomys_damarensis
ENSHGLG00000012886	VARS2	83	52.108	ENSFHEG00000013932	vars2	96	50.000	Fundulus_heteroclitus
ENSHGLG00000012886	VARS2	85	55.053	ENSGMOG00000018960	vars2	98	54.995	Gadus_morhua
ENSHGLG00000012886	VARS2	83	48.406	ENSGAFG00000004737	vars2	92	48.288	Gambusia_affinis
ENSHGLG00000012886	VARS2	88	53.955	ENSGACG00000001464	vars2	99	53.854	Gasterosteus_aculeatus
ENSHGLG00000012886	VARS2	88	60.585	ENSGAGG00000011652	VARS2	99	60.484	Gopherus_agassizii
ENSHGLG00000012886	VARS2	96	83.695	ENSGGOG00000014587	VARS2	99	83.695	Gorilla_gorilla
ENSHGLG00000012886	VARS2	86	52.289	ENSHBUG00000002448	vars2	94	52.187	Haplochromis_burtoni
ENSHGLG00000012886	VARS2	96	99.812	ENSHGLG00100016535	VARS2	100	99.812	Heterocephalus_glaber_male
ENSHGLG00000012886	VARS2	66	48.327	ENSHCOG00000017907	vars2	94	49.929	Hippocampus_comes
ENSHGLG00000012886	VARS2	90	53.399	ENSIPUG00000015573	Vars2	97	52.174	Ictalurus_punctatus
ENSHGLG00000012886	VARS2	96	84.151	ENSSTOG00000009924	VARS2	99	84.151	Ictidomys_tridecemlineatus
ENSHGLG00000012886	VARS2	96	81.853	ENSJJAG00000011144	Vars2	99	81.853	Jaculus_jaculus
ENSHGLG00000012886	VARS2	90	52.233	ENSKMAG00000001393	vars2	99	50.551	Kryptolebias_marmoratus
ENSHGLG00000012886	VARS2	86	53.689	ENSLBEG00000011949	vars2	96	51.194	Labrus_bergylta
ENSHGLG00000012886	VARS2	50	63.784	ENSLBEG00000005480	-	81	63.243	Labrus_bergylta
ENSHGLG00000012886	VARS2	91	52.039	ENSLACG00000001576	-	99	52.233	Latimeria_chalumnae
ENSHGLG00000012886	VARS2	96	82.687	ENSLAFG00000015183	VARS2	99	82.687	Loxodonta_africana
ENSHGLG00000012886	VARS2	96	83.695	ENSMFAG00000042367	VARS2	99	83.695	Macaca_fascicularis
ENSHGLG00000012886	VARS2	96	83.695	ENSMMUG00000018609	VARS2	99	83.695	Macaca_mulatta
ENSHGLG00000012886	VARS2	96	83.789	ENSMNEG00000043163	VARS2	99	83.789	Macaca_nemestrina
ENSHGLG00000012886	VARS2	98	83.796	ENSMLEG00000041728	VARS2	99	83.796	Mandrillus_leucophaeus
ENSHGLG00000012886	VARS2	92	50.000	ENSMAMG00000020339	vars2	97	49.811	Mastacembelus_armatus
ENSHGLG00000012886	VARS2	94	51.165	ENSMZEG00005017669	vars2	99	51.072	Maylandia_zebra
ENSHGLG00000012886	VARS2	96	81.698	ENSMAUG00000018946	Vars2	99	81.698	Mesocricetus_auratus
ENSHGLG00000012886	VARS2	81	84.546	ENSMICG00000005365	VARS2	100	84.546	Microcebus_murinus
ENSHGLG00000012886	VARS2	91	82.374	ENSMOCG00000014607	Vars2	99	82.374	Microtus_ochrogaster
ENSHGLG00000012886	VARS2	88	52.328	ENSMMOG00000012122	vars2	97	50.526	Mola_mola
ENSHGLG00000012886	VARS2	96	72.693	ENSMODG00000015848	VARS2	99	72.693	Monodelphis_domestica
ENSHGLG00000012886	VARS2	89	52.200	ENSMALG00000009217	vars2	98	52.100	Monopterus_albus
ENSHGLG00000012886	VARS2	96	81.262	MGP_CAROLIEiJ_G0021529	Vars2	99	81.262	Mus_caroli
ENSHGLG00000012886	VARS2	96	81.450	ENSMUSG00000038838	Vars2	99	81.450	Mus_musculus
ENSHGLG00000012886	VARS2	96	81.733	MGP_PahariEiJ_G0020523	Vars2	99	81.733	Mus_pahari
ENSHGLG00000012886	VARS2	96	81.450	MGP_SPRETEiJ_G0022436	Vars2	99	81.450	Mus_spretus
ENSHGLG00000012886	VARS2	96	82.015	ENSMPUG00000011643	VARS2	99	82.015	Mustela_putorius_furo
ENSHGLG00000012886	VARS2	97	79.944	ENSMLUG00000002356	VARS2	97	79.944	Myotis_lucifugus
ENSHGLG00000012886	VARS2	95	75.813	ENSNGAG00000020607	Vars2	99	75.637	Nannospalax_galili
ENSHGLG00000012886	VARS2	59	49.587	ENSNBRG00000001624	vars2	59	51.515	Neolamprologus_brichardi
ENSHGLG00000012886	VARS2	97	79.518	ENSNLEG00000005625	VARS2	98	79.518	Nomascus_leucogenys
ENSHGLG00000012886	VARS2	75	72.879	ENSMEUG00000014475	VARS2	90	72.879	Notamacropus_eugenii
ENSHGLG00000012886	VARS2	86	78.855	ENSOPRG00000000682	VARS2	90	78.855	Ochotona_princeps
ENSHGLG00000012886	VARS2	96	83.804	ENSODEG00000017965	VARS2	99	83.804	Octodon_degus
ENSHGLG00000012886	VARS2	63	58.924	ENSONIG00000004734	vars2	72	58.924	Oreochromis_niloticus
ENSHGLG00000012886	VARS2	79	61.239	ENSOANG00000000398	-	99	61.124	Ornithorhynchus_anatinus
ENSHGLG00000012886	VARS2	96	77.932	ENSOCUG00000021496	VARS2	64	78.189	Oryctolagus_cuniculus
ENSHGLG00000012886	VARS2	90	52.148	ENSORLG00000010632	vars2	96	51.619	Oryzias_latipes
ENSHGLG00000012886	VARS2	90	52.187	ENSORLG00020018584	vars2	96	51.770	Oryzias_latipes_hni
ENSHGLG00000012886	VARS2	90	52.089	ENSORLG00015010408	vars2	96	51.478	Oryzias_latipes_hsok
ENSHGLG00000012886	VARS2	88	52.778	ENSOMEG00000008360	vars2	95	52.124	Oryzias_melastigma
ENSHGLG00000012886	VARS2	97	81.903	ENSOGAG00000006087	VARS2	98	81.903	Otolemur_garnettii
ENSHGLG00000012886	VARS2	96	82.075	ENSOARG00000010844	VARS2	99	81.989	Ovis_aries
ENSHGLG00000012886	VARS2	98	82.061	ENSPPAG00000041141	VARS2	99	83.600	Pan_paniscus
ENSHGLG00000012886	VARS2	98	80.684	ENSPPRG00000006751	VARS2	99	80.684	Panthera_pardus
ENSHGLG00000012886	VARS2	98	80.591	ENSPTIG00000017799	VARS2	98	82.814	Panthera_tigris_altaica
ENSHGLG00000012886	VARS2	98	82.061	ENSPTRG00000034497	VARS2	99	83.600	Pan_troglodytes
ENSHGLG00000012886	VARS2	98	83.704	ENSPANG00000018481	VARS2	100	84.236	Papio_anubis
ENSHGLG00000012886	VARS2	91	54.892	ENSPKIG00000011372	vars2	96	54.493	Paramormyrops_kingsleyae
ENSHGLG00000012886	VARS2	57	67.244	ENSPSIG00000006206	VARS2	92	66.821	Pelodiscus_sinensis
ENSHGLG00000012886	VARS2	93	52.247	ENSPMGG00000000465	vars2	98	52.064	Periophthalmus_magnuspinnatus
ENSHGLG00000012886	VARS2	96	81.114	ENSPEMG00000014691	Vars2	99	81.114	Peromyscus_maniculatus_bairdii
ENSHGLG00000012886	VARS2	96	74.315	ENSPCIG00000015040	VARS2	99	74.857	Phascolarctos_cinereus
ENSHGLG00000012886	VARS2	90	51.473	ENSPFOG00000017616	vars2	96	50.282	Poecilia_formosa
ENSHGLG00000012886	VARS2	90	51.028	ENSPLAG00000019778	vars2	98	49.439	Poecilia_latipinna
ENSHGLG00000012886	VARS2	90	51.126	ENSPMEG00000011123	vars2	98	49.533	Poecilia_mexicana
ENSHGLG00000012886	VARS2	85	47.004	ENSPREG00000014998	vars2	95	45.642	Poecilia_reticulata
ENSHGLG00000012886	VARS2	96	83.883	ENSPPYG00000016424	VARS2	99	83.883	Pongo_abelii
ENSHGLG00000012886	VARS2	81	78.443	ENSPCAG00000006946	VARS2	84	78.443	Procavia_capensis
ENSHGLG00000012886	VARS2	98	81.827	ENSPCOG00000014839	VARS2	99	81.827	Propithecus_coquereli
ENSHGLG00000012886	VARS2	96	81.262	ENSPVAG00000004197	VARS2	99	81.262	Pteropus_vampyrus
ENSHGLG00000012886	VARS2	79	60.598	ENSPNYG00000010314	vars2	97	60.598	Pundamilia_nyererei
ENSHGLG00000012886	VARS2	91	53.675	ENSPNAG00000026793	vars2	96	53.086	Pygocentrus_nattereri
ENSHGLG00000012886	VARS2	96	81.356	ENSRNOG00000000833	Vars2	99	81.356	Rattus_norvegicus
ENSHGLG00000012886	VARS2	96	84.072	ENSRBIG00000032725	VARS2	99	84.072	Rhinopithecus_bieti
ENSHGLG00000012886	VARS2	96	83.977	ENSRROG00000043847	VARS2	99	83.977	Rhinopithecus_roxellana
ENSHGLG00000012886	VARS2	97	81.495	ENSSBOG00000033240	VARS2	99	81.495	Saimiri_boliviensis_boliviensis
ENSHGLG00000012886	VARS2	96	73.277	ENSSHAG00000009307	VARS2	100	73.277	Sarcophilus_harrisii
ENSHGLG00000012886	VARS2	92	53.558	ENSSFOG00015016187	vars2	98	52.243	Scleropages_formosus
ENSHGLG00000012886	VARS2	90	53.017	ENSSMAG00000020842	vars2	97	52.053	Scophthalmus_maximus
ENSHGLG00000012886	VARS2	90	51.758	ENSSDUG00000011598	vars2	97	50.760	Seriola_dumerili
ENSHGLG00000012886	VARS2	87	52.459	ENSSLDG00000015492	vars2	97	50.096	Seriola_lalandi_dorsalis
ENSHGLG00000012886	VARS2	55	83.212	ENSSARG00000003786	-	69	83.212	Sorex_araneus
ENSHGLG00000012886	VARS2	85	58.661	ENSSPUG00000014700	VARS2	94	58.555	Sphenodon_punctatus
ENSHGLG00000012886	VARS2	89	50.200	ENSSPAG00000004654	vars2	98	48.674	Stegastes_partitus
ENSHGLG00000012886	VARS2	96	83.051	ENSSSCG00000001384	VARS2	99	83.051	Sus_scrofa
ENSHGLG00000012886	VARS2	91	52.075	ENSTRUG00000005264	vars2	99	50.936	Takifugu_rubripes
ENSHGLG00000012886	VARS2	92	51.787	ENSTNIG00000005916	vars2	99	51.165	Tetraodon_nigroviridis
ENSHGLG00000012886	VARS2	50	86.567	ENSTBEG00000007976	-	53	86.567	Tupaia_belangeri
ENSHGLG00000012886	VARS2	90	80.804	ENSTTRG00000012243	VARS2	93	80.804	Tursiops_truncatus
ENSHGLG00000012886	VARS2	96	81.468	ENSUAMG00000026124	VARS2	99	84.039	Ursus_americanus
ENSHGLG00000012886	VARS2	96	82.298	ENSUMAG00000019894	VARS2	99	82.298	Ursus_maritimus
ENSHGLG00000012886	VARS2	97	81.384	ENSVVUG00000010754	VARS2	95	81.384	Vulpes_vulpes
ENSHGLG00000012886	VARS2	86	54.366	ENSXETG00000003036	vars2	99	54.262	Xenopus_tropicalis
ENSHGLG00000012886	VARS2	87	52.863	ENSXCOG00000003455	vars2	98	51.014	Xiphophorus_couchianus
ENSHGLG00000012886	VARS2	90	50.831	ENSXMAG00000013523	vars2	98	49.534	Xiphophorus_maculatus