EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000012936 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 62237 bases
Position: chrJH602088.1:10083476-10145712
Accession: 101713971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000018105	La	PF05383.17	2e-14	1	1
ENSHGLP00000018104	La	PF05383.17	2.1e-14	1	1
ENSHGLP00000018103	La	PF05383.17	2.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000018280	LARP4B-201	2223	XM_004854583	ENSHGLP00000018103	740 (aa)	XP_004854641	-
ENSHGLT00000018281	LARP4B-202	1992	-	ENSHGLP00000018104	663 (aa)	-	-
ENSHGLT00000018282	LARP4B-203	1971	-	ENSHGLP00000018105	656 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000012936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000012936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000012936	LARP4B	82	49.747	ENSHGLG00000005513	-	99	41.314
ENSHGLG00000012936	LARP4B	69	60.547	ENSHGLG00000013875	-	90	42.430
ENSHGLG00000012936	LARP4B	56	43.799	ENSHGLG00000010979	-	76	43.799

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000012936	LARP4B	100	90.685	ENSG00000107929	LARP4B	100	91.228	Homo_sapiens
ENSHGLG00000012936	LARP4B	85	83.740	ENSAPOG00000020531	LARP4B	100	56.430	Acanthochromis_polyacanthus
ENSHGLG00000012936	LARP4B	100	86.658	ENSAMEG00000001810	LARP4B	100	86.658	Ailuropoda_melanoleuca
ENSHGLG00000012936	LARP4B	85	64.865	ENSAOCG00000007887	-	79	84.768	Amphiprion_ocellaris
ENSHGLG00000012936	LARP4B	96	57.937	ENSAPEG00000002512	LARP4B	98	57.526	Amphiprion_percula
ENSHGLG00000012936	LARP4B	100	59.581	ENSATEG00000012614	LARP4B	100	55.348	Anabas_testudineus
ENSHGLG00000012936	LARP4B	100	79.447	ENSAPLG00000003813	LARP4B	98	76.760	Anas_platyrhynchos
ENSHGLG00000012936	LARP4B	100	75.374	ENSACAG00000002858	LARP4B	100	74.468	Anolis_carolinensis
ENSHGLG00000012936	LARP4B	100	88.394	ENSANAG00000007531	-	100	88.394	Aotus_nancymaae
ENSHGLG00000012936	LARP4B	100	64.346	ENSACLG00000026356	LARP4B	100	57.285	Astatotilapia_calliptera
ENSHGLG00000012936	LARP4B	99	51.297	ENSAMXG00000003335	larp4b	93	52.809	Astyanax_mexicanus
ENSHGLG00000012936	LARP4B	100	82.930	ENSBTAG00000013899	LARP4B	100	82.930	Bos_taurus
ENSHGLG00000012936	LARP4B	100	88.259	ENSCJAG00000018434	LARP4B	100	88.259	Callithrix_jacchus
ENSHGLG00000012936	LARP4B	100	86.792	ENSCAFG00020004209	LARP4B	100	86.792	Canis_lupus_dingo
ENSHGLG00000012936	LARP4B	100	82.527	ENSCHIG00000013543	LARP4B	100	82.527	Capra_hircus
ENSHGLG00000012936	LARP4B	80	92.101	ENSTSYG00000002568	LARP4B	100	92.101	Carlito_syrichta
ENSHGLG00000012936	LARP4B	96	85.309	ENSCAPG00000009725	LARP4B	97	82.821	Cavia_aperea
ENSHGLG00000012936	LARP4B	100	95.884	ENSCPOG00000009375	LARP4B	100	95.412	Cavia_porcellus
ENSHGLG00000012936	LARP4B	100	88.664	ENSCCAG00000024869	LARP4B	100	88.664	Cebus_capucinus
ENSHGLG00000012936	LARP4B	100	89.744	ENSCATG00000019750	LARP4B	100	89.744	Cercocebus_atys
ENSHGLG00000012936	LARP4B	100	96.618	ENSCLAG00000011570	LARP4B	100	95.833	Chinchilla_lanigera
ENSHGLG00000012936	LARP4B	66	90.323	ENSCHOG00000007831	-	66	90.323	Choloepus_hoffmanni
ENSHGLG00000012936	LARP4B	100	76.596	ENSCPBG00000017063	LARP4B	100	76.596	Chrysemys_picta_bellii
ENSHGLG00000012936	LARP4B	100	87.719	ENSCANG00000038021	LARP4B	100	88.542	Colobus_angolensis_palliatus
ENSHGLG00000012936	LARP4B	100	92.308	ENSCGRG00001022930	Larp4b	100	92.308	Cricetulus_griseus_chok1gshd
ENSHGLG00000012936	LARP4B	100	92.308	ENSCGRG00000006022	Larp4b	100	92.308	Cricetulus_griseus_crigri
ENSHGLG00000012936	LARP4B	100	53.623	ENSCSEG00000007342	LARP4B	100	53.755	Cynoglossus_semilaevis
ENSHGLG00000012936	LARP4B	100	61.301	ENSCVAG00000008910	LARP4B	100	55.820	Cyprinodon_variegatus
ENSHGLG00000012936	LARP4B	90	52.685	ENSDARG00000062146	larp4b	91	53.623	Danio_rerio
ENSHGLG00000012936	LARP4B	93	90.984	ENSDNOG00000045543	-	100	90.964	Dasypus_novemcinctus
ENSHGLG00000012936	LARP4B	100	91.566	ENSDORG00000009328	Larp4b	100	91.579	Dipodomys_ordii
ENSHGLG00000012936	LARP4B	84	89.076	ENSETEG00000011249	LARP4B	91	84.192	Echinops_telfairi
ENSHGLG00000012936	LARP4B	100	86.927	ENSEASG00005019068	-	100	86.927	Equus_asinus_asinus
ENSHGLG00000012936	LARP4B	100	87.062	ENSECAG00000024040	LARP4B	100	87.062	Equus_caballus
ENSHGLG00000012936	LARP4B	100	82.685	ENSEEUG00000008391	LARP4B	98	82.819	Erinaceus_europaeus
ENSHGLG00000012936	LARP4B	100	61.716	ENSELUG00000008626	LARP4B	100	55.624	Esox_lucius
ENSHGLG00000012936	LARP4B	86	48.756	ENSELUG00000001417	-	94	39.763	Esox_lucius
ENSHGLG00000012936	LARP4B	100	88.070	ENSFCAG00000000721	-	100	85.349	Felis_catus
ENSHGLG00000012936	LARP4B	100	78.066	ENSFALG00000006961	LARP4B	100	75.532	Ficedula_albicollis
ENSHGLG00000012936	LARP4B	100	98.243	ENSFDAG00000006158	LARP4B	97	97.436	Fukomys_damarensis
ENSHGLG00000012936	LARP4B	100	50.713	ENSFHEG00000013037	LARP4B	65	89.916	Fundulus_heteroclitus
ENSHGLG00000012936	LARP4B	80	65.241	ENSGMOG00000010818	-	89	64.677	Gadus_morhua
ENSHGLG00000012936	LARP4B	100	78.929	ENSGALG00000006672	LARP4B	100	75.894	Gallus_gallus
ENSHGLG00000012936	LARP4B	100	57.786	ENSGACG00000017535	LARP4B	98	58.559	Gasterosteus_aculeatus
ENSHGLG00000012936	LARP4B	91	77.988	ENSGAGG00000008598	LARP4B	100	77.988	Gopherus_agassizii
ENSHGLG00000012936	LARP4B	100	89.069	ENSGGOG00000003572	LARP4B	100	89.069	Gorilla_gorilla
ENSHGLG00000012936	LARP4B	100	63.884	ENSHBUG00000007535	LARP4B	100	56.787	Haplochromis_burtoni
ENSHGLG00000012936	LARP4B	100	100.000	ENSHGLG00100016220	-	100	99.595	Heterocephalus_glaber_male
ENSHGLG00000012936	LARP4B	86	83.293	ENSHGLG00100017261	-	100	80.923	Heterocephalus_glaber_male
ENSHGLG00000012936	LARP4B	99	62.019	ENSHCOG00000011581	LARP4B	89	54.545	Hippocampus_comes
ENSHGLG00000012936	LARP4B	92	51.433	ENSIPUG00000009705	larp4b	93	51.289	Ictalurus_punctatus
ENSHGLG00000012936	LARP4B	100	96.126	ENSSTOG00000000587	LARP4B	100	96.126	Ictidomys_tridecemlineatus
ENSHGLG00000012936	LARP4B	100	92.708	ENSJJAG00000020847	Larp4b	100	90.283	Jaculus_jaculus
ENSHGLG00000012936	LARP4B	100	63.452	ENSKMAG00000021674	LARP4B	100	56.875	Kryptolebias_marmoratus
ENSHGLG00000012936	LARP4B	90	60.320	ENSLBEG00000025293	-	83	60.703	Labrus_bergylta
ENSHGLG00000012936	LARP4B	90	70.930	ENSLACG00000009492	LARP4B	100	66.474	Latimeria_chalumnae
ENSHGLG00000012936	LARP4B	100	69.811	ENSLOCG00000012290	larp4b	100	65.805	Lepisosteus_oculatus
ENSHGLG00000012936	LARP4B	100	89.510	ENSLAFG00000015334	LARP4B	100	88.345	Loxodonta_africana
ENSHGLG00000012936	LARP4B	100	89.744	ENSMFAG00000001766	LARP4B	100	88.542	Macaca_fascicularis
ENSHGLG00000012936	LARP4B	100	89.744	ENSMMUG00000005279	LARP4B	100	89.744	Macaca_mulatta
ENSHGLG00000012936	LARP4B	100	89.609	ENSMNEG00000014019	LARP4B	100	88.542	Macaca_nemestrina
ENSHGLG00000012936	LARP4B	100	89.353	ENSMLEG00000035198	LARP4B	100	89.353	Mandrillus_leucophaeus
ENSHGLG00000012936	LARP4B	100	61.448	ENSMAMG00000013742	LARP4B	100	55.528	Mastacembelus_armatus
ENSHGLG00000012936	LARP4B	81	72.124	ENSMZEG00005014594	-	100	57.531	Maylandia_zebra
ENSHGLG00000012936	LARP4B	82	75.862	ENSMZEG00005006498	-	93	75.862	Maylandia_zebra
ENSHGLG00000012936	LARP4B	100	79.896	ENSMGAG00000005472	LARP4B	100	75.033	Meleagris_gallopavo
ENSHGLG00000012936	LARP4B	100	92.609	ENSMAUG00000021657	Larp4b	100	93.146	Mesocricetus_auratus
ENSHGLG00000012936	LARP4B	100	84.886	ENSMICG00000001301	LARP4B	100	83.131	Microcebus_murinus
ENSHGLG00000012936	LARP4B	100	92.609	ENSMOCG00000021452	Larp4b	100	93.750	Microtus_ochrogaster
ENSHGLG00000012936	LARP4B	84	75.862	ENSMMOG00000011253	-	93	75.862	Mola_mola
ENSHGLG00000012936	LARP4B	100	78.230	ENSMODG00000005957	LARP4B	100	74.572	Monodelphis_domestica
ENSHGLG00000012936	LARP4B	100	48.945	ENSMALG00000012432	LARP4B	100	50.132	Monopterus_albus
ENSHGLG00000012936	LARP4B	100	93.322	MGP_CAROLIEiJ_G0018216	Larp4b	100	92.018	Mus_caroli
ENSHGLG00000012936	LARP4B	100	93.497	ENSMUSG00000033499	Larp4b	100	93.497	Mus_musculus
ENSHGLG00000012936	LARP4B	100	92.319	MGP_PahariEiJ_G0019266	Larp4b	100	92.794	Mus_pahari
ENSHGLG00000012936	LARP4B	100	93.497	MGP_SPRETEiJ_G0019074	Larp4b	100	93.322	Mus_spretus
ENSHGLG00000012936	LARP4B	100	88.070	ENSMPUG00000016220	LARP4B	97	85.580	Mustela_putorius_furo
ENSHGLG00000012936	LARP4B	93	85.110	ENSMLUG00000005880	LARP4B	100	83.022	Myotis_lucifugus
ENSHGLG00000012936	LARP4B	100	92.619	ENSNGAG00000001750	Larp4b	100	89.879	Nannospalax_galili
ENSHGLG00000012936	LARP4B	84	75.862	ENSNBRG00000020018	LARP4B	93	75.862	Neolamprologus_brichardi
ENSHGLG00000012936	LARP4B	100	90.315	ENSNLEG00000013442	LARP4B	100	89.204	Nomascus_leucogenys
ENSHGLG00000012936	LARP4B	79	86.842	ENSMEUG00000013114	-	70	86.842	Notamacropus_eugenii
ENSHGLG00000012936	LARP4B	100	94.792	ENSOPRG00000003300	LARP4B	100	88.503	Ochotona_princeps
ENSHGLG00000012936	LARP4B	100	91.403	ENSODEG00000001109	LARP4B	100	94.792	Octodon_degus
ENSHGLG00000012936	LARP4B	100	67.832	ENSONIG00000017705	LARP4B	100	59.387	Oreochromis_niloticus
ENSHGLG00000012936	LARP4B	100	77.751	ENSOANG00000006100	LARP4B	100	75.626	Ornithorhynchus_anatinus
ENSHGLG00000012936	LARP4B	100	89.921	ENSOCUG00000004950	LARP4B	97	89.921	Oryctolagus_cuniculus
ENSHGLG00000012936	LARP4B	100	55.138	ENSORLG00000006080	LARP4B	100	55.263	Oryzias_latipes
ENSHGLG00000012936	LARP4B	100	55.089	ENSORLG00020020940	LARP4B	100	55.133	Oryzias_latipes_hni
ENSHGLG00000012936	LARP4B	100	61.565	ENSORLG00015020608	LARP4B	100	55.344	Oryzias_latipes_hsok
ENSHGLG00000012936	LARP4B	100	60.102	ENSOMEG00000019619	LARP4B	100	54.318	Oryzias_melastigma
ENSHGLG00000012936	LARP4B	93	86.782	ENSOGAG00000011540	LARP4B	100	85.591	Otolemur_garnettii
ENSHGLG00000012936	LARP4B	100	82.463	ENSOARG00000015320	LARP4B	98	82.463	Ovis_aries
ENSHGLG00000012936	LARP4B	100	89.204	ENSPPAG00000039232	LARP4B	100	89.204	Pan_paniscus
ENSHGLG00000012936	LARP4B	100	88.246	ENSPPRG00000009489	LARP4B	100	85.714	Panthera_pardus
ENSHGLG00000012936	LARP4B	100	88.246	ENSPTIG00000008543	LARP4B	100	85.714	Panthera_tigris_altaica
ENSHGLG00000012936	LARP4B	100	89.204	ENSPTRG00000002235	LARP4B	100	89.204	Pan_troglodytes
ENSHGLG00000012936	LARP4B	100	89.744	ENSPANG00000023546	LARP4B	100	88.542	Papio_anubis
ENSHGLG00000012936	LARP4B	99	56.364	ENSPKIG00000012368	LARP4B	99	56.234	Paramormyrops_kingsleyae
ENSHGLG00000012936	LARP4B	85	86.032	ENSPSIG00000005600	LARP4B	99	86.032	Pelodiscus_sinensis
ENSHGLG00000012936	LARP4B	92	61.005	ENSPMGG00000008261	LARP4B	87	55.891	Periophthalmus_magnuspinnatus
ENSHGLG00000012936	LARP4B	100	90.958	ENSPEMG00000014052	Larp4b	100	90.958	Peromyscus_maniculatus_bairdii
ENSHGLG00000012936	LARP4B	100	60.484	ENSPFOG00000000029	LARP4B	100	55.776	Poecilia_formosa
ENSHGLG00000012936	LARP4B	100	60.484	ENSPLAG00000002871	LARP4B	100	56.152	Poecilia_latipinna
ENSHGLG00000012936	LARP4B	100	60.386	ENSPMEG00000016361	LARP4B	100	55.817	Poecilia_mexicana
ENSHGLG00000012936	LARP4B	100	89.084	ENSPPYG00000002035	LARP4B	97	89.084	Pongo_abelii
ENSHGLG00000012936	LARP4B	100	89.104	ENSPCOG00000014688	LARP4B	100	87.719	Propithecus_coquereli
ENSHGLG00000012936	LARP4B	85	97.143	ENSPVAG00000009784	LARP4B	88	97.143	Pteropus_vampyrus
ENSHGLG00000012936	LARP4B	100	64.566	ENSPNYG00000024252	LARP4B	100	57.285	Pundamilia_nyererei
ENSHGLG00000012936	LARP4B	94	52.646	ENSPNAG00000028956	larp4b	95	52.507	Pygocentrus_nattereri
ENSHGLG00000012936	LARP4B	99	90.553	ENSRNOG00000015888	Larp4b	100	90.688	Rattus_norvegicus
ENSHGLG00000012936	LARP4B	100	89.609	ENSRBIG00000033294	LARP4B	100	89.609	Rhinopithecus_bieti
ENSHGLG00000012936	LARP4B	100	89.474	ENSRROG00000033879	LARP4B	100	89.474	Rhinopithecus_roxellana
ENSHGLG00000012936	LARP4B	100	86.458	ENSSBOG00000021109	LARP4B	100	86.458	Saimiri_boliviensis_boliviensis
ENSHGLG00000012936	LARP4B	100	78.998	ENSSHAG00000013392	LARP4B	100	77.097	Sarcophilus_harrisii
ENSHGLG00000012936	LARP4B	91	60.684	ENSSFOG00015003256	LARP4B	90	58.824	Scleropages_formosus
ENSHGLG00000012936	LARP4B	82	79.310	ENSSMAG00000005982	-	99	79.310	Scophthalmus_maximus
ENSHGLG00000012936	LARP4B	100	63.283	ENSSDUG00000006704	LARP4B	100	57.444	Seriola_dumerili
ENSHGLG00000012936	LARP4B	87	75.862	ENSSLDG00000020660	LARP4B	99	75.862	Seriola_lalandi_dorsalis
ENSHGLG00000012936	LARP4B	63	98.113	ENSSARG00000001243	-	79	98.113	Sorex_araneus
ENSHGLG00000012936	LARP4B	100	75.832	ENSSPUG00000002102	-	100	73.387	Sphenodon_punctatus
ENSHGLG00000012936	LARP4B	88	86.811	ENSSPUG00000013734	-	99	80.169	Sphenodon_punctatus
ENSHGLG00000012936	LARP4B	100	56.328	ENSSPAG00000014628	LARP4B	100	56.328	Stegastes_partitus
ENSHGLG00000012936	LARP4B	100	82.321	ENSSSCG00000011162	LARP4B	100	85.057	Sus_scrofa
ENSHGLG00000012936	LARP4B	100	78.472	ENSTGUG00000000811	-	100	75.834	Taeniopygia_guttata
ENSHGLG00000012936	LARP4B	100	57.309	ENSTNIG00000004571	-	98	57.345	Tetraodon_nigroviridis
ENSHGLG00000012936	LARP4B	98	66.988	ENSTNIG00000007991	LARP4B	99	55.669	Tetraodon_nigroviridis
ENSHGLG00000012936	LARP4B	90	89.000	ENSTTRG00000011151	LARP4B	90	89.000	Tursiops_truncatus
ENSHGLG00000012936	LARP4B	88	87.730	ENSUAMG00000016461	LARP4B	95	88.235	Ursus_americanus
ENSHGLG00000012936	LARP4B	100	86.927	ENSUMAG00000016127	LARP4B	100	86.927	Ursus_maritimus
ENSHGLG00000012936	LARP4B	57	95.506	ENSVPAG00000000128	-	73	95.506	Vicugna_pacos
ENSHGLG00000012936	LARP4B	100	86.523	ENSVVUG00000008641	LARP4B	100	86.523	Vulpes_vulpes
ENSHGLG00000012936	LARP4B	99	74.941	ENSXETG00000016882	larp4b	100	69.657	Xenopus_tropicalis
ENSHGLG00000012936	LARP4B	100	53.479	ENSXCOG00000019952	LARP4B	100	53.599	Xiphophorus_couchianus
ENSHGLG00000012936	LARP4B	100	60.161	ENSXMAG00000021533	LARP4B	100	55.805	Xiphophorus_maculatus