EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000013231 (Gene tree)
Gene ID: -
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 101509 bases
Position: chrJH602081.1:17421291-17522799
Accession: 101719260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000018473	HRDC	PF00570.23	2.3e-12	1	1
ENSHGLP00000018471	HRDC	PF00570.23	2.4e-12	1	1
ENSHGLP00000018472	HRDC	PF00570.23	2.4e-12	1	1
ENSHGLP00000018473	BDHCT	PF08072.11	2.6e-20	1	1
ENSHGLP00000018471	BDHCT	PF08072.11	2.7e-20	1	1
ENSHGLP00000018472	BDHCT	PF08072.11	2.7e-20	1	1
ENSHGLP00000018473	DEAD	PF00270.29	5.4e-19	1	1
ENSHGLP00000018472	DEAD	PF00270.29	5.7e-19	1	1
ENSHGLP00000018471	DEAD	PF00270.29	5.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000018657	BLM-203	5823	-	ENSHGLP00000018473	1413 (aa)	-	-
ENSHGLT00000018656	BLM-202	5952	-	ENSHGLP00000018472	1456 (aa)	-	-
ENSHGLT00000018655	BLM-201	5569	XM_004852815	ENSHGLP00000018471	1446 (aa)	XP_004852872	UPI00034F40F5

Gene Model

Click here to download ENSHGLG00000013231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000013231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000013231	BLM	99	81.338	ENSG00000197299	BLM	100	81.479	Homo_sapiens
ENSHGLG00000013231	BLM	69	64.610	ENSAPOG00000017966	blm	89	64.610	Acanthochromis_polyacanthus
ENSHGLG00000013231	BLM	99	78.566	ENSAMEG00000013843	BLM	100	78.496	Ailuropoda_melanoleuca
ENSHGLG00000013231	BLM	68	61.337	ENSACIG00000023762	blm	73	52.749	Amphilophus_citrinellus
ENSHGLG00000013231	BLM	66	64.528	ENSAOCG00000003318	blm	64	64.277	Amphiprion_ocellaris
ENSHGLG00000013231	BLM	54	64.447	ENSAPEG00000018105	blm	56	64.447	Amphiprion_percula
ENSHGLG00000013231	BLM	82	66.117	ENSATEG00000006421	blm	85	66.372	Anabas_testudineus
ENSHGLG00000013231	BLM	82	57.455	ENSAPLG00000006878	BLM	98	58.278	Anas_platyrhynchos
ENSHGLG00000013231	BLM	73	58.294	ENSACAG00000014275	BLM	99	49.590	Anolis_carolinensis
ENSHGLG00000013231	BLM	99	81.184	ENSANAG00000038415	BLM	100	81.184	Aotus_nancymaae
ENSHGLG00000013231	BLM	87	62.275	ENSACLG00000020354	blm	85	65.019	Astatotilapia_calliptera
ENSHGLG00000013231	BLM	66	64.917	ENSAMXG00000016970	blm	69	61.467	Astyanax_mexicanus
ENSHGLG00000013231	BLM	96	75.463	ENSBTAG00000020301	BLM	100	80.731	Bos_taurus
ENSHGLG00000013231	BLM	99	81.113	ENSCJAG00000009803	BLM	100	81.113	Callithrix_jacchus
ENSHGLG00000013231	BLM	99	78.436	ENSCAFG00000012385	BLM	100	78.436	Canis_familiaris
ENSHGLG00000013231	BLM	99	78.295	ENSCAFG00020016111	BLM	95	89.712	Canis_lupus_dingo
ENSHGLG00000013231	BLM	99	77.676	ENSCHIG00000010329	BLM	100	77.746	Capra_hircus
ENSHGLG00000013231	BLM	99	80.268	ENSTSYG00000012368	BLM	100	80.338	Carlito_syrichta
ENSHGLG00000013231	BLM	88	89.956	ENSCAPG00000017976	BLM	100	90.102	Cavia_aperea
ENSHGLG00000013231	BLM	99	87.154	ENSCPOG00000001761	BLM	100	87.225	Cavia_porcellus
ENSHGLG00000013231	BLM	99	80.000	ENSCCAG00000023069	BLM	100	80.070	Cebus_capucinus
ENSHGLG00000013231	BLM	99	81.338	ENSCATG00000040609	BLM	92	90.296	Cercocebus_atys
ENSHGLG00000013231	BLM	99	88.085	ENSCLAG00000012111	BLM	100	88.156	Chinchilla_lanigera
ENSHGLG00000013231	BLM	99	80.659	ENSCSAG00000017040	BLM	100	80.939	Chlorocebus_sabaeus
ENSHGLG00000013231	BLM	91	76.211	ENSCHOG00000006255	BLM	93	76.211	Choloepus_hoffmanni
ENSHGLG00000013231	BLM	88	54.636	ENSCPBG00000025000	BLM	95	73.446	Chrysemys_picta_bellii
ENSHGLG00000013231	BLM	84	91.111	ENSCANG00000034808	BLM	100	91.111	Colobus_angolensis_palliatus
ENSHGLG00000013231	BLM	99	78.255	ENSCGRG00001024897	Blm	100	78.270	Cricetulus_griseus_chok1gshd
ENSHGLG00000013231	BLM	67	73.800	ENSCGRG00000016261	Blm	97	73.827	Cricetulus_griseus_crigri
ENSHGLG00000013231	BLM	79	51.868	ENSCSEG00000013483	blm	85	51.560	Cynoglossus_semilaevis
ENSHGLG00000013231	BLM	83	64.610	ENSDARG00000077089	blm	60	64.232	Danio_rerio
ENSHGLG00000013231	BLM	99	77.397	ENSDNOG00000010159	BLM	99	77.327	Dasypus_novemcinctus
ENSHGLG00000013231	BLM	73	80.843	ENSDORG00000011033	Blm	100	80.939	Dipodomys_ordii
ENSHGLG00000013231	BLM	56	39.927	FBgn0002906	Blm	55	39.319	Drosophila_melanogaster
ENSHGLG00000013231	BLM	87	64.115	ENSETEG00000015019	BLM	86	64.115	Echinops_telfairi
ENSHGLG00000013231	BLM	99	77.080	ENSEASG00005006727	BLM	100	77.465	Equus_asinus_asinus
ENSHGLG00000013231	BLM	99	79.065	ENSECAG00000011405	BLM	100	79.484	Equus_caballus
ENSHGLG00000013231	BLM	97	72.734	ENSEEUG00000001434	BLM	98	72.374	Erinaceus_europaeus
ENSHGLG00000013231	BLM	84	66.080	ENSELUG00000019098	blm	59	66.080	Esox_lucius
ENSHGLG00000013231	BLM	99	77.887	ENSFCAG00000006087	BLM	100	77.746	Felis_catus
ENSHGLG00000013231	BLM	65	65.541	ENSFALG00000010981	BLM	89	54.953	Ficedula_albicollis
ENSHGLG00000013231	BLM	95	93.271	ENSFDAG00000012658	BLM	99	93.271	Fukomys_damarensis
ENSHGLG00000013231	BLM	82	64.259	ENSFHEG00000002553	blm	76	53.430	Fundulus_heteroclitus
ENSHGLG00000013231	BLM	90	62.038	ENSGMOG00000016431	blm	90	60.480	Gadus_morhua
ENSHGLG00000013231	BLM	99	50.578	ENSGALG00000008256	BLM	99	50.747	Gallus_gallus
ENSHGLG00000013231	BLM	62	63.822	ENSGAFG00000001117	blm	81	52.694	Gambusia_affinis
ENSHGLG00000013231	BLM	68	64.751	ENSGACG00000010863	blm	100	73.913	Gasterosteus_aculeatus
ENSHGLG00000013231	BLM	89	50.550	ENSGAGG00000005383	BLM	91	76.404	Gopherus_agassizii
ENSHGLG00000013231	BLM	99	81.241	ENSGGOG00000007710	BLM	92	90.080	Gorilla_gorilla
ENSHGLG00000013231	BLM	87	62.515	ENSHBUG00000015943	blm	88	62.768	Haplochromis_burtoni
ENSHGLG00000013231	BLM	60	61.449	ENSHCOG00000011455	blm	83	62.331	Hippocampus_comes
ENSHGLG00000013231	BLM	73	55.225	ENSIPUG00000000529	blm	71	62.620	Ictalurus_punctatus
ENSHGLG00000013231	BLM	99	80.183	ENSSTOG00000005000	BLM	100	80.745	Ictidomys_tridecemlineatus
ENSHGLG00000013231	BLM	65	84.968	ENSJJAG00000016322	Blm	94	84.968	Jaculus_jaculus
ENSHGLG00000013231	BLM	68	62.649	ENSKMAG00000016608	blm	63	62.604	Kryptolebias_marmoratus
ENSHGLG00000013231	BLM	99	50.677	ENSLACG00000006490	BLM	99	51.287	Latimeria_chalumnae
ENSHGLG00000013231	BLM	81	65.311	ENSLOCG00000014302	blm	82	53.190	Lepisosteus_oculatus
ENSHGLG00000013231	BLM	99	81.408	ENSMFAG00000042982	BLM	92	90.296	Macaca_fascicularis
ENSHGLG00000013231	BLM	99	81.479	ENSMMUG00000019526	BLM	92	90.296	Macaca_mulatta
ENSHGLG00000013231	BLM	97	79.221	ENSMNEG00000031251	BLM	92	90.027	Macaca_nemestrina
ENSHGLG00000013231	BLM	99	78.662	ENSMLEG00000032934	BLM	100	78.592	Mandrillus_leucophaeus
ENSHGLG00000013231	BLM	65	65.743	ENSMAMG00000008726	blm	68	66.289	Mastacembelus_armatus
ENSHGLG00000013231	BLM	87	62.395	ENSMZEG00005022323	blm	70	64.943	Maylandia_zebra
ENSHGLG00000013231	BLM	99	78.020	ENSMAUG00000008953	Blm	99	77.949	Mesocricetus_auratus
ENSHGLG00000013231	BLM	99	80.718	ENSMICG00000034442	BLM	100	80.647	Microcebus_murinus
ENSHGLG00000013231	BLM	99	78.030	ENSMOCG00000016367	Blm	99	78.101	Microtus_ochrogaster
ENSHGLG00000013231	BLM	88	61.955	ENSMMOG00000006959	blm	65	61.955	Mola_mola
ENSHGLG00000013231	BLM	99	63.636	ENSMODG00000019449	BLM	99	63.500	Monodelphis_domestica
ENSHGLG00000013231	BLM	62	65.414	ENSMALG00000007323	blm	75	54.121	Monopterus_albus
ENSHGLG00000013231	BLM	99	75.492	MGP_CAROLIEiJ_G0029907	Blm	100	75.229	Mus_caroli
ENSHGLG00000013231	BLM	99	75.681	ENSMUSG00000030528	Blm	100	75.350	Mus_musculus
ENSHGLG00000013231	BLM	99	76.247	MGP_PahariEiJ_G0013129	Blm	100	75.651	Mus_pahari
ENSHGLG00000013231	BLM	99	76.194	MGP_SPRETEiJ_G0031009	Blm	100	75.772	Mus_spretus
ENSHGLG00000013231	BLM	84	76.700	ENSMPUG00000015657	BLM	99	76.617	Mustela_putorius_furo
ENSHGLG00000013231	BLM	99	75.843	ENSMLUG00000014697	BLM	100	75.983	Myotis_lucifugus
ENSHGLG00000013231	BLM	99	79.070	ENSNGAG00000001275	Blm	100	78.672	Nannospalax_galili
ENSHGLG00000013231	BLM	87	62.515	ENSNBRG00000019702	blm	69	62.665	Neolamprologus_brichardi
ENSHGLG00000013231	BLM	99	79.577	ENSNLEG00000012087	BLM	100	81.531	Nomascus_leucogenys
ENSHGLG00000013231	BLM	94	78.486	ENSMEUG00000007253	BLM	99	78.353	Notamacropus_eugenii
ENSHGLG00000013231	BLM	94	86.565	ENSOPRG00000011667	BLM	94	86.565	Ochotona_princeps
ENSHGLG00000013231	BLM	73	84.043	ENSODEG00000015373	BLM	100	84.139	Octodon_degus
ENSHGLG00000013231	BLM	99	45.602	ENSONIG00000015193	blm	99	46.338	Oreochromis_niloticus
ENSHGLG00000013231	BLM	54	80.724	ENSOANG00000009316	-	99	80.724	Ornithorhynchus_anatinus
ENSHGLG00000013231	BLM	99	74.085	ENSOCUG00000013969	BLM	99	74.225	Oryctolagus_cuniculus
ENSHGLG00000013231	BLM	67	63.560	ENSORLG00000008110	blm	63	63.842	Oryzias_latipes
ENSHGLG00000013231	BLM	87	63.723	ENSORLG00020004812	blm	76	54.630	Oryzias_latipes_hni
ENSHGLG00000013231	BLM	67	63.560	ENSORLG00015018640	blm	78	65.399	Oryzias_latipes_hsok
ENSHGLG00000013231	BLM	67	63.273	ENSOMEG00000023545	blm	66	63.471	Oryzias_melastigma
ENSHGLG00000013231	BLM	99	75.721	ENSOGAG00000005708	BLM	100	75.721	Otolemur_garnettii
ENSHGLG00000013231	BLM	99	76.832	ENSOARG00000012875	BLM	100	76.902	Ovis_aries
ENSHGLG00000013231	BLM	99	80.691	ENSPPAG00000032173	BLM	100	81.268	Pan_paniscus
ENSHGLG00000013231	BLM	99	77.746	ENSPPRG00000002471	BLM	100	77.606	Panthera_pardus
ENSHGLG00000013231	BLM	99	77.496	ENSPTIG00000016168	BLM	100	77.356	Panthera_tigris_altaica
ENSHGLG00000013231	BLM	99	80.338	ENSPTRG00000007460	BLM	100	80.915	Pan_troglodytes
ENSHGLG00000013231	BLM	99	81.479	ENSPANG00000018572	BLM	92	90.566	Papio_anubis
ENSHGLG00000013231	BLM	87	63.183	ENSPKIG00000008954	blm	62	63.170	Paramormyrops_kingsleyae
ENSHGLG00000013231	BLM	51	66.946	ENSPMGG00000006629	blm	82	65.282	Periophthalmus_magnuspinnatus
ENSHGLG00000013231	BLM	99	76.744	ENSPEMG00000017348	Blm	100	77.308	Peromyscus_maniculatus_bairdii
ENSHGLG00000013231	BLM	50	58.824	ENSPMAG00000000445	blm	96	58.824	Petromyzon_marinus
ENSHGLG00000013231	BLM	99	62.748	ENSPCIG00000006609	BLM	99	62.705	Phascolarctos_cinereus
ENSHGLG00000013231	BLM	83	63.717	ENSPFOG00000005059	blm	88	63.717	Poecilia_formosa
ENSHGLG00000013231	BLM	54	63.949	ENSPLAG00000017344	blm	77	52.973	Poecilia_latipinna
ENSHGLG00000013231	BLM	62	63.822	ENSPMEG00000000321	blm	77	52.790	Poecilia_mexicana
ENSHGLG00000013231	BLM	62	63.567	ENSPREG00000007715	blm	85	63.567	Poecilia_reticulata
ENSHGLG00000013231	BLM	99	79.225	ENSPPYG00000006784	BLM	100	79.366	Pongo_abelii
ENSHGLG00000013231	BLM	73	90.323	ENSPCAG00000008960	BLM	74	90.323	Procavia_capensis
ENSHGLG00000013231	BLM	99	75.229	ENSPCOG00000000439	BLM	100	76.647	Propithecus_coquereli
ENSHGLG00000013231	BLM	80	95.161	ENSPVAG00000011642	BLM	83	95.161	Pteropus_vampyrus
ENSHGLG00000013231	BLM	82	52.859	ENSPNYG00000010956	blm	72	43.808	Pundamilia_nyererei
ENSHGLG00000013231	BLM	58	63.177	ENSPNAG00000011714	blm	59	62.559	Pygocentrus_nattereri
ENSHGLG00000013231	BLM	99	75.194	ENSRNOG00000011213	Blm	100	74.630	Rattus_norvegicus
ENSHGLG00000013231	BLM	99	79.337	ENSRBIG00000029656	BLM	100	84.084	Rhinopithecus_bieti
ENSHGLG00000013231	BLM	99	80.634	ENSRROG00000037871	BLM	100	80.775	Rhinopithecus_roxellana
ENSHGLG00000013231	BLM	90	80.124	ENSSBOG00000030957	BLM	100	80.124	Saimiri_boliviensis_boliviensis
ENSHGLG00000013231	BLM	99	62.604	ENSSHAG00000007988	BLM	99	63.092	Sarcophilus_harrisii
ENSHGLG00000013231	BLM	58	60.693	ENSSFOG00015015462	blm	67	60.166	Scleropages_formosus
ENSHGLG00000013231	BLM	63	65.031	ENSSMAG00000001120	blm	76	52.887	Scophthalmus_maximus
ENSHGLG00000013231	BLM	54	64.861	ENSSDUG00000010955	blm	56	64.861	Seriola_dumerili
ENSHGLG00000013231	BLM	62	65.031	ENSSLDG00000000634	blm	76	53.846	Seriola_lalandi_dorsalis
ENSHGLG00000013231	BLM	94	67.564	ENSSARG00000006398	BLM	96	74.749	Sorex_araneus
ENSHGLG00000013231	BLM	82	55.932	ENSSPUG00000000013	BLM	99	55.640	Sphenodon_punctatus
ENSHGLG00000013231	BLM	82	64.773	ENSSPAG00000013999	blm	74	53.495	Stegastes_partitus
ENSHGLG00000013231	BLM	93	89.409	ENSSSCG00000001816	BLM	99	89.409	Sus_scrofa
ENSHGLG00000013231	BLM	79	51.505	ENSTGUG00000009959	-	96	52.565	Taeniopygia_guttata
ENSHGLG00000013231	BLM	81	49.793	ENSTRUG00000019860	blm	76	52.598	Takifugu_rubripes
ENSHGLG00000013231	BLM	87	61.899	ENSTNIG00000019246	blm	64	61.779	Tetraodon_nigroviridis
ENSHGLG00000013231	BLM	78	82.609	ENSTBEG00000006706	BLM	80	82.609	Tupaia_belangeri
ENSHGLG00000013231	BLM	99	79.085	ENSTTRG00000016386	BLM	100	79.155	Tursiops_truncatus
ENSHGLG00000013231	BLM	99	78.677	ENSUMAG00000009105	BLM	97	90.041	Ursus_maritimus
ENSHGLG00000013231	BLM	99	77.292	ENSVPAG00000000085	BLM	99	77.221	Vicugna_pacos
ENSHGLG00000013231	BLM	93	87.637	ENSVVUG00000006402	BLM	100	87.912	Vulpes_vulpes
ENSHGLG00000013231	BLM	99	50.471	ENSXETG00000007847	blm	86	73.102	Xenopus_tropicalis
ENSHGLG00000013231	BLM	62	59.720	ENSXCOG00000020227	blm	74	50.462	Xiphophorus_couchianus
ENSHGLG00000013231	BLM	62	63.567	ENSXMAG00000002951	blm	76	52.865	Xiphophorus_maculatus