EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000013390 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 10738 bases
Position: chrJH602050.1:35940257-35950994
Accession: 101726695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000018695	SMN	PF06003.12	4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000018882	-	1771	XM_004838954	ENSHGLP00000018695	238 (aa)	XP_004839011	G5BKB9

Gene Model

Click here to download ENSHGLG00000013390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000013390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000013390	-	100	68.033	ENSHGLG00000001157	-	100	64.490

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000013390	-	100	99.160	ENSG00000119953	SMNDC1	100	99.160	Homo_sapiens
ENSHGLG00000013390	-	100	76.569	ENSAPOG00000021772	smndc1	100	76.569	Acanthochromis_polyacanthus
ENSHGLG00000013390	-	100	98.739	ENSAMEG00000005251	SMNDC1	100	98.739	Ailuropoda_melanoleuca
ENSHGLG00000013390	-	100	76.987	ENSACIG00000004819	smndc1	100	76.987	Amphilophus_citrinellus
ENSHGLG00000013390	-	100	76.569	ENSAOCG00000017869	smndc1	100	76.569	Amphiprion_ocellaris
ENSHGLG00000013390	-	100	76.569	ENSAPEG00000007752	smndc1	100	76.569	Amphiprion_percula
ENSHGLG00000013390	-	100	76.471	ENSATEG00000006830	smndc1	100	76.471	Anabas_testudineus
ENSHGLG00000013390	-	83	94.949	ENSAPLG00000004322	SMNDC1	100	94.949	Anas_platyrhynchos
ENSHGLG00000013390	-	100	94.958	ENSACAG00000005983	SMNDC1	100	94.958	Anolis_carolinensis
ENSHGLG00000013390	-	100	98.739	ENSANAG00000032875	SMNDC1	100	98.739	Aotus_nancymaae
ENSHGLG00000013390	-	100	76.050	ENSACLG00000016360	smndc1	100	76.050	Astatotilapia_calliptera
ENSHGLG00000013390	-	100	76.471	ENSAMXG00000020310	smndc1	100	76.471	Astyanax_mexicanus
ENSHGLG00000013390	-	100	98.319	ENSBTAG00000000551	SMNDC1	100	98.319	Bos_taurus
ENSHGLG00000013390	-	100	98.739	ENSCJAG00000018624	SMNDC1	100	98.739	Callithrix_jacchus
ENSHGLG00000013390	-	100	98.739	ENSCAFG00000010720	SMNDC1	100	98.739	Canis_familiaris
ENSHGLG00000013390	-	100	98.739	ENSCAFG00020011913	SMNDC1	100	98.739	Canis_lupus_dingo
ENSHGLG00000013390	-	100	98.319	ENSCHIG00000010604	SMNDC1	100	98.319	Capra_hircus
ENSHGLG00000013390	-	100	98.319	ENSTSYG00000026454	SMNDC1	100	98.319	Carlito_syrichta
ENSHGLG00000013390	-	100	84.583	ENSCAPG00000009132	SMNDC1	100	99.502	Cavia_aperea
ENSHGLG00000013390	-	100	99.580	ENSCPOG00000031666	SMNDC1	100	99.580	Cavia_porcellus
ENSHGLG00000013390	-	100	98.739	ENSCCAG00000021793	SMNDC1	100	98.739	Cebus_capucinus
ENSHGLG00000013390	-	100	98.319	ENSCATG00000035910	SMNDC1	100	98.319	Cercocebus_atys
ENSHGLG00000013390	-	100	99.160	ENSCLAG00000002838	SMNDC1	100	99.160	Chinchilla_lanigera
ENSHGLG00000013390	-	100	98.739	ENSCSAG00000005169	SMNDC1	100	98.739	Chlorocebus_sabaeus
ENSHGLG00000013390	-	81	97.927	ENSCHOG00000002936	SMNDC1	100	97.927	Choloepus_hoffmanni
ENSHGLG00000013390	-	100	96.639	ENSCPBG00000012837	SMNDC1	100	96.639	Chrysemys_picta_bellii
ENSHGLG00000013390	-	100	77.731	ENSCANG00000036994	-	100	77.731	Colobus_angolensis_palliatus
ENSHGLG00000013390	-	100	91.176	ENSCANG00000034620	-	100	91.176	Colobus_angolensis_palliatus
ENSHGLG00000013390	-	100	98.739	ENSCANG00000031720	-	100	98.739	Colobus_angolensis_palliatus
ENSHGLG00000013390	-	100	97.899	ENSCGRG00001012973	Smndc1	100	97.899	Cricetulus_griseus_chok1gshd
ENSHGLG00000013390	-	100	97.899	ENSCGRG00000012396	Smndc1	100	97.899	Cricetulus_griseus_crigri
ENSHGLG00000013390	-	100	76.050	ENSCSEG00000015621	smndc1	100	76.050	Cynoglossus_semilaevis
ENSHGLG00000013390	-	100	76.891	ENSCVAG00000020432	smndc1	100	76.891	Cyprinodon_variegatus
ENSHGLG00000013390	-	100	79.412	ENSDARG00000056235	smndc1	100	79.412	Danio_rerio
ENSHGLG00000013390	-	100	98.739	ENSDNOG00000016387	SMNDC1	83	98.739	Dasypus_novemcinctus
ENSHGLG00000013390	-	100	98.739	ENSDORG00000023715	Smndc1	100	98.739	Dipodomys_ordii
ENSHGLG00000013390	-	95	41.767	FBgn0039977	CG17454	98	42.972	Drosophila_melanogaster
ENSHGLG00000013390	-	100	71.369	ENSEBUG00000010929	smndc1	100	71.369	Eptatretus_burgeri
ENSHGLG00000013390	-	100	98.739	ENSEASG00005014930	SMNDC1	100	98.739	Equus_asinus_asinus
ENSHGLG00000013390	-	100	98.739	ENSECAG00000029973	SMNDC1	100	98.739	Equus_caballus
ENSHGLG00000013390	-	83	69.192	ENSEEUG00000013407	-	100	69.192	Erinaceus_europaeus
ENSHGLG00000013390	-	100	77.731	ENSELUG00000000227	smndc1	100	77.731	Esox_lucius
ENSHGLG00000013390	-	100	98.739	ENSFCAG00000027353	SMNDC1	100	98.739	Felis_catus
ENSHGLG00000013390	-	100	94.958	ENSFALG00000002306	SMNDC1	100	94.958	Ficedula_albicollis
ENSHGLG00000013390	-	100	100.000	ENSFDAG00000006468	SMNDC1	100	100.000	Fukomys_damarensis
ENSHGLG00000013390	-	100	76.471	ENSFHEG00000020150	smndc1	100	76.471	Fundulus_heteroclitus
ENSHGLG00000013390	-	100	76.891	ENSGMOG00000016585	smndc1	100	76.891	Gadus_morhua
ENSHGLG00000013390	-	100	94.958	ENSGALG00000008561	SMNDC1	100	94.958	Gallus_gallus
ENSHGLG00000013390	-	100	75.210	ENSGAFG00000011582	smndc1	100	75.210	Gambusia_affinis
ENSHGLG00000013390	-	100	76.050	ENSGACG00000009468	smndc1	100	76.050	Gasterosteus_aculeatus
ENSHGLG00000013390	-	100	96.639	ENSGAGG00000024547	SMNDC1	100	96.639	Gopherus_agassizii
ENSHGLG00000013390	-	100	98.739	ENSGGOG00000010071	SMNDC1	100	98.739	Gorilla_gorilla
ENSHGLG00000013390	-	100	76.050	ENSHBUG00000017596	smndc1	100	76.050	Haplochromis_burtoni
ENSHGLG00000013390	-	100	77.049	ENSHGLG00100004278	-	100	76.639	Heterocephalus_glaber_male
ENSHGLG00000013390	-	100	100.000	ENSHGLG00100004814	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000013390	-	100	75.732	ENSHCOG00000000783	smndc1	100	75.732	Hippocampus_comes
ENSHGLG00000013390	-	100	77.731	ENSIPUG00000004217	smndc1	100	77.731	Ictalurus_punctatus
ENSHGLG00000013390	-	100	98.319	ENSSTOG00000006088	SMNDC1	100	98.319	Ictidomys_tridecemlineatus
ENSHGLG00000013390	-	100	98.739	ENSJJAG00000019974	Smndc1	100	98.739	Jaculus_jaculus
ENSHGLG00000013390	-	100	75.210	ENSKMAG00000020134	smndc1	100	75.210	Kryptolebias_marmoratus
ENSHGLG00000013390	-	100	74.790	ENSLBEG00000004598	smndc1	100	74.790	Labrus_bergylta
ENSHGLG00000013390	-	100	84.034	ENSLACG00000007784	SMNDC1	100	84.034	Latimeria_chalumnae
ENSHGLG00000013390	-	100	84.874	ENSLOCG00000012355	smndc1	100	84.874	Lepisosteus_oculatus
ENSHGLG00000013390	-	100	98.319	ENSLAFG00000014353	SMNDC1	100	98.319	Loxodonta_africana
ENSHGLG00000013390	-	100	81.092	ENSMFAG00000038381	-	100	81.092	Macaca_fascicularis
ENSHGLG00000013390	-	100	98.739	ENSMFAG00000002433	-	100	98.739	Macaca_fascicularis
ENSHGLG00000013390	-	100	81.092	ENSMMUG00000045875	-	100	81.092	Macaca_mulatta
ENSHGLG00000013390	-	100	98.739	ENSMMUG00000007775	SMNDC1	100	98.739	Macaca_mulatta
ENSHGLG00000013390	-	100	98.739	ENSMNEG00000042963	-	100	98.739	Macaca_nemestrina
ENSHGLG00000013390	-	100	87.395	ENSMNEG00000033853	-	100	87.395	Macaca_nemestrina
ENSHGLG00000013390	-	100	92.469	ENSMLEG00000040236	SMNDC1	100	92.050	Mandrillus_leucophaeus
ENSHGLG00000013390	-	89	73.709	ENSMAMG00000018233	smndc1	87	73.709	Mastacembelus_armatus
ENSHGLG00000013390	-	100	76.050	ENSMZEG00005027510	smndc1	100	76.050	Maylandia_zebra
ENSHGLG00000013390	-	84	94.500	ENSMGAG00000010777	SMNDC1	84	94.500	Meleagris_gallopavo
ENSHGLG00000013390	-	100	98.739	ENSMAUG00000012243	-	100	98.739	Mesocricetus_auratus
ENSHGLG00000013390	-	99	80.169	ENSMAUG00000005459	-	93	80.169	Mesocricetus_auratus
ENSHGLG00000013390	-	100	85.714	ENSMICG00000031640	-	100	85.714	Microcebus_murinus
ENSHGLG00000013390	-	100	98.739	ENSMICG00000027336	-	100	98.739	Microcebus_murinus
ENSHGLG00000013390	-	100	98.319	ENSMOCG00000002458	Smndc1	100	98.319	Microtus_ochrogaster
ENSHGLG00000013390	-	100	76.471	ENSMMOG00000008856	smndc1	100	76.471	Mola_mola
ENSHGLG00000013390	-	100	98.739	ENSMODG00000010542	SMNDC1	100	98.739	Monodelphis_domestica
ENSHGLG00000013390	-	100	76.471	ENSMALG00000017598	smndc1	100	76.471	Monopterus_albus
ENSHGLG00000013390	-	100	99.160	MGP_CAROLIEiJ_G0023072	Smndc1	100	99.160	Mus_caroli
ENSHGLG00000013390	-	100	98.739	ENSMUSG00000025024	Smndc1	100	98.739	Mus_musculus
ENSHGLG00000013390	-	100	98.319	MGP_PahariEiJ_G0014560	Smndc1	100	98.319	Mus_pahari
ENSHGLG00000013390	-	100	98.739	MGP_SPRETEiJ_G0023993	Smndc1	100	98.739	Mus_spretus
ENSHGLG00000013390	-	100	98.739	ENSMPUG00000002089	SMNDC1	100	98.739	Mustela_putorius_furo
ENSHGLG00000013390	-	100	98.319	ENSMLUG00000016007	SMNDC1	100	98.319	Myotis_lucifugus
ENSHGLG00000013390	-	100	97.899	ENSNGAG00000006833	Smndc1	100	97.899	Nannospalax_galili
ENSHGLG00000013390	-	100	75.630	ENSNBRG00000017089	smndc1	100	75.630	Neolamprologus_brichardi
ENSHGLG00000013390	-	100	98.739	ENSNLEG00000015471	SMNDC1	100	98.739	Nomascus_leucogenys
ENSHGLG00000013390	-	82	58.500	ENSMEUG00000010120	-	99	59.000	Notamacropus_eugenii
ENSHGLG00000013390	-	100	99.580	ENSOPRG00000015348	SMNDC1	100	99.580	Ochotona_princeps
ENSHGLG00000013390	-	100	69.328	ENSODEG00000007594	-	100	66.387	Octodon_degus
ENSHGLG00000013390	-	100	75.630	ENSONIG00000000434	smndc1	100	75.630	Oreochromis_niloticus
ENSHGLG00000013390	-	100	98.319	ENSOANG00000001598	SMNDC1	100	98.319	Ornithorhynchus_anatinus
ENSHGLG00000013390	-	100	98.739	ENSOCUG00000008145	-	100	98.739	Oryctolagus_cuniculus
ENSHGLG00000013390	-	100	74.790	ENSOCUG00000012274	-	100	76.471	Oryctolagus_cuniculus
ENSHGLG00000013390	-	100	76.050	ENSORLG00000005934	smndc1	95	76.050	Oryzias_latipes
ENSHGLG00000013390	-	100	76.050	ENSORLG00020008796	smndc1	95	76.050	Oryzias_latipes_hni
ENSHGLG00000013390	-	100	76.050	ENSORLG00015013666	smndc1	100	76.050	Oryzias_latipes_hsok
ENSHGLG00000013390	-	100	77.731	ENSOMEG00000007590	smndc1	100	77.731	Oryzias_melastigma
ENSHGLG00000013390	-	100	98.319	ENSOGAG00000000571	SMNDC1	100	98.319	Otolemur_garnettii
ENSHGLG00000013390	-	100	98.319	ENSOARG00000009500	SMNDC1	100	98.319	Ovis_aries
ENSHGLG00000013390	-	100	98.739	ENSPPAG00000027815	SMNDC1	100	98.739	Pan_paniscus
ENSHGLG00000013390	-	100	98.739	ENSPPRG00000013749	SMNDC1	100	98.739	Panthera_pardus
ENSHGLG00000013390	-	100	98.739	ENSPTIG00000011451	SMNDC1	100	98.739	Panthera_tigris_altaica
ENSHGLG00000013390	-	100	98.739	ENSPTRG00000002937	SMNDC1	100	98.739	Pan_troglodytes
ENSHGLG00000013390	-	100	98.739	ENSPANG00000020805	-	100	98.739	Papio_anubis
ENSHGLG00000013390	-	100	92.857	ENSPANG00000031346	-	100	92.857	Papio_anubis
ENSHGLG00000013390	-	100	81.513	ENSPKIG00000017164	smndc1	100	81.513	Paramormyrops_kingsleyae
ENSHGLG00000013390	-	100	97.059	ENSPSIG00000012257	SMNDC1	100	97.059	Pelodiscus_sinensis
ENSHGLG00000013390	-	100	73.950	ENSPMGG00000015651	smndc1	100	73.950	Periophthalmus_magnuspinnatus
ENSHGLG00000013390	-	100	98.739	ENSPEMG00000022058	Smndc1	100	98.739	Peromyscus_maniculatus_bairdii
ENSHGLG00000013390	-	100	67.623	ENSPMAG00000007705	smndc1	100	67.623	Petromyzon_marinus
ENSHGLG00000013390	-	100	98.739	ENSPCIG00000018419	SMNDC1	100	98.739	Phascolarctos_cinereus
ENSHGLG00000013390	-	97	63.043	ENSPCIG00000009693	-	100	63.043	Phascolarctos_cinereus
ENSHGLG00000013390	-	100	75.630	ENSPFOG00000017113	smndc1	100	75.630	Poecilia_formosa
ENSHGLG00000013390	-	100	76.050	ENSPLAG00000010372	smndc1	100	76.050	Poecilia_latipinna
ENSHGLG00000013390	-	100	76.050	ENSPMEG00000012288	smndc1	100	76.050	Poecilia_mexicana
ENSHGLG00000013390	-	100	75.210	ENSPREG00000012279	smndc1	100	75.210	Poecilia_reticulata
ENSHGLG00000013390	-	100	98.739	ENSPPYG00000002643	SMNDC1	100	98.739	Pongo_abelii
ENSHGLG00000013390	-	81	97.927	ENSPCAG00000016183	SMNDC1	100	97.927	Procavia_capensis
ENSHGLG00000013390	-	100	98.319	ENSPCOG00000024343	SMNDC1	100	98.319	Propithecus_coquereli
ENSHGLG00000013390	-	100	76.891	ENSPVAG00000004368	SMNDC1	100	76.891	Pteropus_vampyrus
ENSHGLG00000013390	-	92	69.778	ENSPNYG00000024093	smndc1	86	75.758	Pundamilia_nyererei
ENSHGLG00000013390	-	100	76.471	ENSPNAG00000025285	smndc1	100	76.471	Pygocentrus_nattereri
ENSHGLG00000013390	-	100	99.160	ENSRNOG00000014833	Smndc1	100	99.160	Rattus_norvegicus
ENSHGLG00000013390	-	100	82.353	ENSRBIG00000032452	-	100	82.353	Rhinopithecus_bieti
ENSHGLG00000013390	-	100	98.319	ENSRBIG00000000224	-	100	98.319	Rhinopithecus_bieti
ENSHGLG00000013390	-	100	82.773	ENSRROG00000039125	-	100	82.773	Rhinopithecus_roxellana
ENSHGLG00000013390	-	100	98.739	ENSRROG00000044992	-	100	98.739	Rhinopithecus_roxellana
ENSHGLG00000013390	-	100	98.739	ENSSBOG00000026789	SMNDC1	100	98.739	Saimiri_boliviensis_boliviensis
ENSHGLG00000013390	-	100	98.739	ENSSHAG00000015189	SMNDC1	100	98.739	Sarcophilus_harrisii
ENSHGLG00000013390	-	100	80.672	ENSSFOG00015008311	smndc1	100	80.672	Scleropages_formosus
ENSHGLG00000013390	-	100	76.050	ENSSMAG00000020118	smndc1	100	76.050	Scophthalmus_maximus
ENSHGLG00000013390	-	100	76.891	ENSSDUG00000015330	smndc1	100	76.891	Seriola_dumerili
ENSHGLG00000013390	-	100	76.891	ENSSLDG00000017325	smndc1	100	76.891	Seriola_lalandi_dorsalis
ENSHGLG00000013390	-	100	99.160	ENSSARG00000006063	SMNDC1	100	99.160	Sorex_araneus
ENSHGLG00000013390	-	100	95.378	ENSSPUG00000004574	SMNDC1	100	95.378	Sphenodon_punctatus
ENSHGLG00000013390	-	100	76.151	ENSSPAG00000000338	smndc1	100	76.151	Stegastes_partitus
ENSHGLG00000013390	-	100	99.160	ENSSSCG00000030507	SMNDC1	100	99.160	Sus_scrofa
ENSHGLG00000013390	-	100	94.958	ENSTGUG00000010599	SMNDC1	100	94.958	Taeniopygia_guttata
ENSHGLG00000013390	-	100	74.370	ENSTRUG00000023281	smndc1	100	74.370	Takifugu_rubripes
ENSHGLG00000013390	-	100	75.630	ENSTNIG00000013331	smndc1	100	75.630	Tetraodon_nigroviridis
ENSHGLG00000013390	-	100	99.160	ENSTBEG00000014337	SMNDC1	100	99.160	Tupaia_belangeri
ENSHGLG00000013390	-	100	98.739	ENSUAMG00000008142	SMNDC1	100	98.739	Ursus_americanus
ENSHGLG00000013390	-	100	98.739	ENSUMAG00000023722	SMNDC1	100	98.739	Ursus_maritimus
ENSHGLG00000013390	-	83	97.980	ENSVPAG00000003402	SMNDC1	100	97.980	Vicugna_pacos
ENSHGLG00000013390	-	100	98.739	ENSVVUG00000007820	SMNDC1	100	98.739	Vulpes_vulpes
ENSHGLG00000013390	-	60	81.690	ENSXETG00000015415	SMNDC1	100	81.690	Xenopus_tropicalis
ENSHGLG00000013390	-	100	75.210	ENSXCOG00000009159	smndc1	100	75.210	Xiphophorus_couchianus
ENSHGLG00000013390	-	100	74.790	ENSXMAG00000012755	smndc1	100	74.790	Xiphophorus_maculatus