EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000013585 (Gene tree)
Gene ID: -
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 29343 bases
Position: chrJH602075.1:8420305-8449647
Accession: 101712610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000018953	MMR_HSR1	PF01926.23	1.5e-05	1	1
ENSHGLP00000018950	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000019139	-	2681	XM_004849961	ENSHGLP00000018950	205 (aa)	XP_004850018	A0A0P6IZP9
ENSHGLT00000019140	-	417	-	ENSHGLP00000018951	138 (aa)	-	UPI00004704BB
ENSHGLT00000019142	-	615	-	ENSHGLP00000018953	204 (aa)	-	-
ENSHGLT00000019141	-	381	-	ENSHGLP00000018952	126 (aa)	-	UPI0000208584

Gene Model

Click here to download ENSHGLG00000013585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000013585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000013585	RAB1A	100	45.581	ENSHGLG00000014984	RAB11B	99	45.581
ENSHGLG00000013585	RAB1A	57	34.746	ENSHGLG00000004366	ARL8A	61	34.746
ENSHGLG00000013585	RAB1A	80	48.214	ENSHGLG00000018536	RAB33A	71	48.214
ENSHGLG00000013585	RAB1A	81	50.602	ENSHGLG00000002759	RAB30	82	50.602
ENSHGLG00000013585	RAB1A	56	33.051	ENSHGLG00000020760	ARL14	59	33.051
ENSHGLG00000013585	RAB1A	95	43.878	ENSHGLG00000005995	RAB5B	90	43.878
ENSHGLG00000013585	RAB1A	83	39.306	ENSHGLG00000000127	RAB7A	86	39.306
ENSHGLG00000013585	RAB1A	79	40.994	ENSHGLG00000007261	RAB31	82	40.994
ENSHGLG00000013585	RAB1A	95	38.384	ENSHGLG00000008829	-	94	38.384
ENSHGLG00000013585	RAB1A	93	33.000	ENSHGLG00000005750	-	87	33.000
ENSHGLG00000013585	RAB1A	90	48.108	ENSHGLG00000019399	RAB2A	99	45.238
ENSHGLG00000013585	RAB1A	95	38.660	ENSHGLG00000009337	RAB22A	97	38.660
ENSHGLG00000013585	RAB1A	95	44.330	ENSHGLG00000004365	RAB18	93	44.330
ENSHGLG00000013585	RAB1A	85	52.299	ENSHGLG00000005396	RAB11A	81	52.299
ENSHGLG00000013585	RAB1A	57	33.058	ENSHGLG00000010538	ARL2	61	33.058
ENSHGLG00000013585	RAB1A	95	44.388	ENSHGLG00000012067	RAB5C	89	44.388
ENSHGLG00000013585	RAB1A	95	36.410	ENSHGLG00000016898	RAB6B	94	36.410
ENSHGLG00000013585	RAB1A	77	33.951	ENSHGLG00000008311	RAB24	79	35.185
ENSHGLG00000013585	RAB1A	80	35.119	ENSHGLG00000007292	-	72	35.119
ENSHGLG00000013585	RAB1A	76	38.994	ENSHGLG00000000448	RAB9B	79	38.994
ENSHGLG00000013585	RAB1A	80	38.415	ENSHGLG00000009388	-	86	38.415
ENSHGLG00000013585	RAB1A	75	47.742	ENSHGLG00000007301	-	77	47.742
ENSHGLG00000013585	RAB1A	99	44.554	ENSHGLG00000013486	RAB14	93	44.554
ENSHGLG00000013585	RAB1A	84	34.463	ENSHGLG00000004508	HRAS	93	34.463
ENSHGLG00000013585	RAB1A	86	43.820	ENSHGLG00000000990	RAB39B	84	43.820
ENSHGLG00000013585	RAB1A	81	46.988	ENSHGLG00000005517	RAB25	78	46.988
ENSHGLG00000013585	RAB1A	82	49.704	ENSHGLG00000006189	RAB12	67	49.419
ENSHGLG00000013585	RAB1A	77	40.373	ENSHGLG00000008023	RAB34	62	40.373
ENSHGLG00000013585	RAB1A	76	38.994	ENSHGLG00000001069	RAB9A	79	38.994
ENSHGLG00000013585	RAB1A	57	30.252	ENSHGLG00000006478	ARL4A	59	30.252
ENSHGLG00000013585	RAB1A	99	53.960	ENSHGLG00000012703	RAB35	100	53.960
ENSHGLG00000013585	RAB1A	87	43.820	ENSHGLG00000004384	RAB37	82	43.820
ENSHGLG00000013585	RAB1A	57	31.356	ENSHGLG00000001846	ARL8B	61	31.356
ENSHGLG00000013585	RAB1A	81	30.814	ENSHGLG00000013756	DNAJC27	63	30.814
ENSHGLG00000013585	RAB1A	89	54.545	ENSHGLG00000008749	RAB13	93	54.545
ENSHGLG00000013585	RAB1A	84	47.126	ENSHGLG00000006357	-	84	47.126
ENSHGLG00000013585	RAB1A	77	32.278	ENSHGLG00000009371	-	70	30.769
ENSHGLG00000013585	RAB1A	97	47.000	ENSHGLG00000004071	RAB2B	91	49.432
ENSHGLG00000013585	RAB1A	88	33.514	ENSHGLG00000018663	RERG	90	33.514
ENSHGLG00000013585	RAB1A	85	32.000	ENSHGLG00000006790	RHEB	95	32.000
ENSHGLG00000013585	RAB1A	83	36.207	ENSHGLG00000014208	MRAS	83	36.207
ENSHGLG00000013585	RAB1A	80	37.805	ENSHGLG00000008775	KRAS	95	35.912
ENSHGLG00000013585	RAB1A	94	42.000	ENSHGLG00000006346	-	97	42.000
ENSHGLG00000013585	RAB1A	57	31.092	ENSHGLG00000020294	ARL4C	61	31.092
ENSHGLG00000013585	RAB1A	83	43.429	ENSHGLG00000008370	RAB33B	76	43.429
ENSHGLG00000013585	RAB1A	80	50.909	ENSHGLG00000012256	RAB15	78	50.909
ENSHGLG00000013585	RAB1A	99	93.069	ENSHGLG00000009071	RAB1B	100	93.069
ENSHGLG00000013585	RAB1A	96	33.645	ENSHGLG00000009476	RAB36	79	33.645
ENSHGLG00000013585	RAB1A	95	40.722	ENSHGLG00000017749	-	87	40.722
ENSHGLG00000013585	RAB1A	81	34.940	ENSHGLG00000013030	-	73	33.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000013585	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSHGLG00000013585	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSHGLG00000013585	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSHGLG00000013585	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSHGLG00000013585	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSHGLG00000013585	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSHGLG00000013585	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSHGLG00000013585	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSHGLG00000013585	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSHGLG00000013585	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSHGLG00000013585	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSHGLG00000013585	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSHGLG00000013585	RAB1A	97	100.000	ENSCHIG00000014060	RAB1A	100	97.561	Capra_hircus
ENSHGLG00000013585	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSHGLG00000013585	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSHGLG00000013585	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSHGLG00000013585	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSHGLG00000013585	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSHGLG00000013585	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSHGLG00000013585	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSHGLG00000013585	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSHGLG00000013585	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSHGLG00000013585	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSHGLG00000013585	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSHGLG00000013585	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSHGLG00000013585	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSHGLG00000013585	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSHGLG00000013585	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSHGLG00000013585	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSHGLG00000013585	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSHGLG00000013585	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSHGLG00000013585	RAB1A	99	98.020	ENSFALG00000013624	RAB1A	99	98.020	Ficedula_albicollis
ENSHGLG00000013585	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSHGLG00000013585	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSHGLG00000013585	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSHGLG00000013585	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSHGLG00000013585	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSHGLG00000013585	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSHGLG00000013585	RAB1A	100	100.000	ENSHGLG00100007994	RAB1A	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000013585	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSHGLG00000013585	RAB1A	97	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSHGLG00000013585	RAB1A	97	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSHGLG00000013585	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSHGLG00000013585	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSHGLG00000013585	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSHGLG00000013585	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSHGLG00000013585	RAB1A	97	100.000	ENSMMUG00000021721	RAB1A	91	100.000	Macaca_mulatta
ENSHGLG00000013585	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSHGLG00000013585	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSHGLG00000013585	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSHGLG00000013585	RAB1A	97	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSHGLG00000013585	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSHGLG00000013585	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSHGLG00000013585	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSHGLG00000013585	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSHGLG00000013585	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSHGLG00000013585	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSHGLG00000013585	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSHGLG00000013585	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSHGLG00000013585	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSHGLG00000013585	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSHGLG00000013585	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSHGLG00000013585	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSHGLG00000013585	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSHGLG00000013585	RAB1A	97	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSHGLG00000013585	RAB1A	94	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSHGLG00000013585	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSHGLG00000013585	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSHGLG00000013585	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSHGLG00000013585	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSHGLG00000013585	RAB1A	97	100.000	ENSOARG00000019997	RAB1A	97	100.000	Ovis_aries
ENSHGLG00000013585	RAB1A	99	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSHGLG00000013585	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSHGLG00000013585	RAB1A	97	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSHGLG00000013585	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSHGLG00000013585	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSHGLG00000013585	RAB1A	97	99.492	ENSPSIG00000008028	RAB1A	99	96.552	Pelodiscus_sinensis
ENSHGLG00000013585	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSHGLG00000013585	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSHGLG00000013585	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSHGLG00000013585	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSHGLG00000013585	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSHGLG00000013585	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSHGLG00000013585	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSHGLG00000013585	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSHGLG00000013585	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSHGLG00000013585	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSHGLG00000013585	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSHGLG00000013585	RAB1A	97	99.492	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSHGLG00000013585	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSHGLG00000013585	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSHGLG00000013585	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSHGLG00000013585	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSHGLG00000013585	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSHGLG00000013585	RAB1A	100	97.073	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSHGLG00000013585	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSHGLG00000013585	RAB1A	100	97.549	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSHGLG00000013585	RAB1A	97	100.000	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSHGLG00000013585	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSHGLG00000013585	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus