EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000013598 (Gene tree)
Gene ID: -
Gene Symbol: POLR2J
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 4347 bases
Position: chrJH602053.1:15169459-15173805
Accession: 101721550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000018971	RNA_pol_L_2	PF13656.6	2.6e-29	1	1
ENSHGLP00000018969	RNA_pol_L_2	PF13656.6	3e-29	1	1
ENSHGLP00000018970	RNA_pol_L_2	PF13656.6	2.3e-18	1	1
ENSHGLP00000018971	RNA_pol_L	PF01193.24	2.9e-10	1	1
ENSHGLP00000018969	RNA_pol_L	PF01193.24	3.3e-10	1	1
ENSHGLP00000018970	RNA_pol_L	PF01193.24	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000019160	-	330	-	ENSHGLP00000018971	110 (aa)	-	-
ENSHGLT00000019159	-	264	-	ENSHGLP00000018970	87 (aa)	-	UPI0000F4F017
ENSHGLT00000019158	-	354	XM_004840113	ENSHGLP00000018969	117 (aa)	XP_004840170	G5AXA4

Gene Model

Click here to download ENSHGLG00000013598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000013598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000013598	POLR2J	88	33.019	ENSHGLG00000003202	POLR1D	80	33.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000013598	POLR2J	98	98.148	ENSG00000228049	POLR2J2	94	95.413	Homo_sapiens
ENSHGLG00000013598	POLR2J	100	100.000	ENSG00000005075	POLR2J	100	100.000	Homo_sapiens
ENSHGLG00000013598	POLR2J	100	94.872	ENSAPOG00000019538	polr2j	100	94.872	Acanthochromis_polyacanthus
ENSHGLG00000013598	POLR2J	97	100.000	ENSAMEG00000015480	-	100	92.126	Ailuropoda_melanoleuca
ENSHGLG00000013598	POLR2J	96	71.963	ENSACIG00000014549	POLR2J2	91	71.818	Amphilophus_citrinellus
ENSHGLG00000013598	POLR2J	100	94.017	ENSAOCG00000006937	polr2j	100	94.017	Amphiprion_ocellaris
ENSHGLG00000013598	POLR2J	100	94.872	ENSAPEG00000021761	polr2j	100	94.872	Amphiprion_percula
ENSHGLG00000013598	POLR2J	100	94.872	ENSATEG00000009731	polr2j	100	94.872	Anabas_testudineus
ENSHGLG00000013598	POLR2J	100	94.872	ENSATEG00000013312	-	100	94.872	Anabas_testudineus
ENSHGLG00000013598	POLR2J	86	98.020	ENSAPLG00000003744	-	100	98.020	Anas_platyrhynchos
ENSHGLG00000013598	POLR2J	100	90.598	ENSACAG00000000251	POLR2J	100	90.598	Anolis_carolinensis
ENSHGLG00000013598	POLR2J	100	94.872	ENSACLG00000014564	polr2j	100	94.872	Astatotilapia_calliptera
ENSHGLG00000013598	POLR2J	100	96.581	ENSAMXG00000007517	polr2j	100	96.581	Astyanax_mexicanus
ENSHGLG00000013598	POLR2J	66	68.493	ENSBTAG00000048046	-	61	68.493	Bos_taurus
ENSHGLG00000013598	POLR2J	100	66.964	WBGene00012187	rpb-11	89	70.000	Caenorhabditis_elegans
ENSHGLG00000013598	POLR2J	100	100.000	ENSCJAG00000016203	-	100	100.000	Callithrix_jacchus
ENSHGLG00000013598	POLR2J	100	100.000	ENSCAFG00000013683	-	100	100.000	Canis_familiaris
ENSHGLG00000013598	POLR2J	85	100.000	ENSTSYG00000029243	-	85	100.000	Carlito_syrichta
ENSHGLG00000013598	POLR2J	100	100.000	ENSCPOG00000001401	-	100	100.000	Cavia_porcellus
ENSHGLG00000013598	POLR2J	100	100.000	ENSCATG00000016595	-	100	100.000	Cercocebus_atys
ENSHGLG00000013598	POLR2J	100	100.000	ENSCLAG00000005238	-	100	100.000	Chinchilla_lanigera
ENSHGLG00000013598	POLR2J	100	100.000	ENSCSAG00000018092	-	100	100.000	Chlorocebus_sabaeus
ENSHGLG00000013598	POLR2J	100	81.197	ENSCING00000020531	-	100	81.197	Ciona_intestinalis
ENSHGLG00000013598	POLR2J	100	81.197	ENSCSAVG00000006948	-	100	81.197	Ciona_savignyi
ENSHGLG00000013598	POLR2J	100	100.000	ENSCGRG00001012814	Polr2j	100	100.000	Cricetulus_griseus_chok1gshd
ENSHGLG00000013598	POLR2J	100	84.615	ENSCGRG00000008433	Polr2j	100	84.615	Cricetulus_griseus_crigri
ENSHGLG00000013598	POLR2J	100	94.017	ENSCSEG00000020352	polr2j	100	94.017	Cynoglossus_semilaevis
ENSHGLG00000013598	POLR2J	100	94.017	ENSCVAG00000014267	polr2j	100	94.017	Cyprinodon_variegatus
ENSHGLG00000013598	POLR2J	100	95.726	ENSDARG00000035146	polr2j	100	95.726	Danio_rerio
ENSHGLG00000013598	POLR2J	100	100.000	ENSDORG00000005934	Polr2j	100	100.000	Dipodomys_ordii
ENSHGLG00000013598	POLR2J	98	78.261	FBgn0032634	Rpb11	98	78.261	Drosophila_melanogaster
ENSHGLG00000013598	POLR2J	100	86.207	ENSEBUG00000016100	polr2j	100	86.207	Eptatretus_burgeri
ENSHGLG00000013598	POLR2J	100	100.000	ENSEASG00005016864	-	100	100.000	Equus_asinus_asinus
ENSHGLG00000013598	POLR2J	100	95.726	ENSELUG00000012822	polr2j	100	95.726	Esox_lucius
ENSHGLG00000013598	POLR2J	100	100.000	ENSFCAG00000000377	-	100	100.000	Felis_catus
ENSHGLG00000013598	POLR2J	100	100.000	ENSFALG00000009523	POLR2J	100	100.000	Ficedula_albicollis
ENSHGLG00000013598	POLR2J	100	100.000	ENSFDAG00000010507	-	100	100.000	Fukomys_damarensis
ENSHGLG00000013598	POLR2J	100	94.872	ENSFHEG00000006625	polr2j	100	94.872	Fundulus_heteroclitus
ENSHGLG00000013598	POLR2J	100	94.872	ENSGMOG00000018207	polr2j	100	94.872	Gadus_morhua
ENSHGLG00000013598	POLR2J	100	100.000	ENSGALG00000030808	-	100	100.000	Gallus_gallus
ENSHGLG00000013598	POLR2J	100	94.872	ENSGAFG00000019555	polr2j	100	94.872	Gambusia_affinis
ENSHGLG00000013598	POLR2J	100	94.872	ENSGACG00000003310	polr2j	100	94.872	Gasterosteus_aculeatus
ENSHGLG00000013598	POLR2J	97	90.265	ENSGAGG00000018304	-	96	90.265	Gopherus_agassizii
ENSHGLG00000013598	POLR2J	85	95.000	ENSGGOG00000004519	-	80	95.000	Gorilla_gorilla
ENSHGLG00000013598	POLR2J	100	94.872	ENSHBUG00000008467	polr2j	100	94.872	Haplochromis_burtoni
ENSHGLG00000013598	POLR2J	100	100.000	ENSHGLG00100011242	POLR2J	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000013598	POLR2J	100	94.872	ENSHCOG00000014827	polr2j	68	94.872	Hippocampus_comes
ENSHGLG00000013598	POLR2J	100	96.581	ENSIPUG00000023960	polr2j	100	96.581	Ictalurus_punctatus
ENSHGLG00000013598	POLR2J	100	100.000	ENSSTOG00000006377	POLR2J	100	100.000	Ictidomys_tridecemlineatus
ENSHGLG00000013598	POLR2J	100	100.000	ENSJJAG00000013854	-	100	100.000	Jaculus_jaculus
ENSHGLG00000013598	POLR2J	100	94.872	ENSJJAG00000018834	-	100	94.872	Jaculus_jaculus
ENSHGLG00000013598	POLR2J	100	94.872	ENSKMAG00000014581	polr2j	79	94.872	Kryptolebias_marmoratus
ENSHGLG00000013598	POLR2J	100	94.872	ENSLBEG00000005885	polr2j	100	94.872	Labrus_bergylta
ENSHGLG00000013598	POLR2J	100	96.581	ENSLOCG00000001885	polr2j	89	96.581	Lepisosteus_oculatus
ENSHGLG00000013598	POLR2J	100	100.000	ENSLAFG00000021507	-	100	100.000	Loxodonta_africana
ENSHGLG00000013598	POLR2J	100	100.000	ENSMMUG00000012019	POLR2J	100	100.000	Macaca_mulatta
ENSHGLG00000013598	POLR2J	100	94.872	ENSMAMG00000009374	polr2j	100	94.872	Mastacembelus_armatus
ENSHGLG00000013598	POLR2J	100	94.872	ENSMZEG00005011932	polr2j	100	94.872	Maylandia_zebra
ENSHGLG00000013598	POLR2J	100	100.000	ENSMGAG00000003534	POLR2J	100	100.000	Meleagris_gallopavo
ENSHGLG00000013598	POLR2J	100	100.000	ENSMAUG00000013049	Polr2j	100	100.000	Mesocricetus_auratus
ENSHGLG00000013598	POLR2J	82	96.667	ENSMICG00000026811	-	94	95.745	Microcebus_murinus
ENSHGLG00000013598	POLR2J	100	100.000	ENSMOCG00000001294	Polr2j	100	100.000	Microtus_ochrogaster
ENSHGLG00000013598	POLR2J	100	94.017	ENSMMOG00000013265	polr2j	100	94.017	Mola_mola
ENSHGLG00000013598	POLR2J	98	100.000	ENSMODG00000013617	-	100	91.406	Monodelphis_domestica
ENSHGLG00000013598	POLR2J	100	94.872	ENSMALG00000020749	polr2j	100	94.872	Monopterus_albus
ENSHGLG00000013598	POLR2J	100	100.000	MGP_CAROLIEiJ_G0027851	Polr2j	100	100.000	Mus_caroli
ENSHGLG00000013598	POLR2J	100	100.000	ENSMUSG00000039771	Polr2j	100	100.000	Mus_musculus
ENSHGLG00000013598	POLR2J	100	100.000	MGP_PahariEiJ_G0024434	Polr2j	100	100.000	Mus_pahari
ENSHGLG00000013598	POLR2J	100	100.000	MGP_SPRETEiJ_G0028853	Polr2j	100	100.000	Mus_spretus
ENSHGLG00000013598	POLR2J	100	100.000	ENSMLUG00000010467	POLR2J	100	100.000	Myotis_lucifugus
ENSHGLG00000013598	POLR2J	100	100.000	ENSNGAG00000023412	Polr2j	100	100.000	Nannospalax_galili
ENSHGLG00000013598	POLR2J	70	90.909	ENSNBRG00000006580	polr2j	59	90.909	Neolamprologus_brichardi
ENSHGLG00000013598	POLR2J	100	100.000	ENSODEG00000015648	-	100	100.000	Octodon_degus
ENSHGLG00000013598	POLR2J	100	76.923	ENSODEG00000008559	-	100	76.923	Octodon_degus
ENSHGLG00000013598	POLR2J	100	94.872	ENSONIG00000000259	polr2j	100	94.872	Oreochromis_niloticus
ENSHGLG00000013598	POLR2J	100	97.436	ENSOANG00000020912	POLR2J	100	97.436	Ornithorhynchus_anatinus
ENSHGLG00000013598	POLR2J	99	99.083	ENSOCUG00000023609	POLR2J	100	92.126	Oryctolagus_cuniculus
ENSHGLG00000013598	POLR2J	100	94.872	ENSORLG00000029046	polr2j	83	94.872	Oryzias_latipes
ENSHGLG00000013598	POLR2J	100	94.872	ENSORLG00020007625	polr2j	83	94.872	Oryzias_latipes_hni
ENSHGLG00000013598	POLR2J	100	94.872	ENSORLG00015003457	polr2j	83	94.872	Oryzias_latipes_hsok
ENSHGLG00000013598	POLR2J	100	94.017	ENSOMEG00000002097	polr2j	100	94.017	Oryzias_melastigma
ENSHGLG00000013598	POLR2J	99	74.545	ENSOGAG00000008250	-	100	71.875	Otolemur_garnettii
ENSHGLG00000013598	POLR2J	100	100.000	ENSOARG00000014204	-	98	100.000	Ovis_aries
ENSHGLG00000013598	POLR2J	100	100.000	ENSPPRG00000012439	-	100	100.000	Panthera_pardus
ENSHGLG00000013598	POLR2J	97	91.228	ENSPTIG00000018714	-	100	97.087	Panthera_tigris_altaica
ENSHGLG00000013598	POLR2J	85	99.000	ENSPSIG00000010173	-	100	99.000	Pelodiscus_sinensis
ENSHGLG00000013598	POLR2J	100	94.872	ENSPMGG00000021256	polr2j	100	94.872	Periophthalmus_magnuspinnatus
ENSHGLG00000013598	POLR2J	100	100.000	ENSPEMG00000015733	Polr2j	100	100.000	Peromyscus_maniculatus_bairdii
ENSHGLG00000013598	POLR2J	100	100.000	ENSPCIG00000009026	-	100	100.000	Phascolarctos_cinereus
ENSHGLG00000013598	POLR2J	100	94.872	ENSPFOG00000012001	polr2j	99	94.872	Poecilia_formosa
ENSHGLG00000013598	POLR2J	100	94.872	ENSPLAG00000014075	polr2j	100	94.872	Poecilia_latipinna
ENSHGLG00000013598	POLR2J	100	94.872	ENSPMEG00000020585	polr2j	100	94.872	Poecilia_mexicana
ENSHGLG00000013598	POLR2J	100	94.872	ENSPREG00000015255	polr2j	100	94.872	Poecilia_reticulata
ENSHGLG00000013598	POLR2J	100	100.000	ENSPCOG00000024573	-	100	100.000	Propithecus_coquereli
ENSHGLG00000013598	POLR2J	98	100.000	ENSPVAG00000017770	-	62	100.000	Pteropus_vampyrus
ENSHGLG00000013598	POLR2J	100	94.872	ENSPNYG00000014832	polr2j	100	94.872	Pundamilia_nyererei
ENSHGLG00000013598	POLR2J	100	94.017	ENSPNAG00000016595	polr2j	100	94.017	Pygocentrus_nattereri
ENSHGLG00000013598	POLR2J	100	100.000	ENSRNOG00000001430	Polr2j	100	100.000	Rattus_norvegicus
ENSHGLG00000013598	POLR2J	100	100.000	ENSSBOG00000025579	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSHGLG00000013598	POLR2J	80	98.571	ENSSHAG00000010443	-	81	100.000	Sarcophilus_harrisii
ENSHGLG00000013598	POLR2J	97	96.262	ENSSFOG00015003371	polr2j	83	94.495	Scleropages_formosus
ENSHGLG00000013598	POLR2J	100	94.872	ENSSMAG00000006729	polr2j	100	94.872	Scophthalmus_maximus
ENSHGLG00000013598	POLR2J	100	94.872	ENSSDUG00000018490	polr2j	100	94.872	Seriola_dumerili
ENSHGLG00000013598	POLR2J	100	94.872	ENSSLDG00000022354	polr2j	100	94.872	Seriola_lalandi_dorsalis
ENSHGLG00000013598	POLR2J	100	100.000	ENSSPUG00000010802	-	100	100.000	Sphenodon_punctatus
ENSHGLG00000013598	POLR2J	100	94.872	ENSSPAG00000021953	polr2j	100	94.872	Stegastes_partitus
ENSHGLG00000013598	POLR2J	100	100.000	ENSSSCG00000007688	-	100	100.000	Sus_scrofa
ENSHGLG00000013598	POLR2J	100	82.906	ENSSSCG00000003703	-	83	82.906	Sus_scrofa
ENSHGLG00000013598	POLR2J	79	100.000	ENSTGUG00000004510	-	100	100.000	Taeniopygia_guttata
ENSHGLG00000013598	POLR2J	85	99.000	ENSTGUG00000004501	-	100	99.000	Taeniopygia_guttata
ENSHGLG00000013598	POLR2J	100	95.726	ENSTRUG00000020842	polr2j	100	95.726	Takifugu_rubripes
ENSHGLG00000013598	POLR2J	100	94.872	ENSTNIG00000002994	polr2j	100	94.872	Tetraodon_nigroviridis
ENSHGLG00000013598	POLR2J	97	82.243	ENSTBEG00000005797	-	70	82.243	Tupaia_belangeri
ENSHGLG00000013598	POLR2J	100	100.000	ENSUAMG00000011310	-	100	100.000	Ursus_americanus
ENSHGLG00000013598	POLR2J	100	100.000	ENSUMAG00000012594	-	100	100.000	Ursus_maritimus
ENSHGLG00000013598	POLR2J	100	98.291	ENSXETG00000001108	polr2j	100	98.291	Xenopus_tropicalis
ENSHGLG00000013598	POLR2J	100	94.872	ENSXMAG00000012422	polr2j	100	94.872	Xiphophorus_maculatus