EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000013939 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 13496 bases
Position: chrJH602073.1:5049666-5063161
Accession: 101725660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000019464	zf-C2H2	PF00096.26	9.5e-13	1	2
ENSHGLP00000019464	zf-C2H2	PF00096.26	9.5e-13	2	2
ENSHGLP00000019464	zf-met	PF12874.7	8.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000019657	PRDM12-201	1098	XM_004849106	ENSHGLP00000019464	365 (aa)	XP_004849163	-

Gene Model

Click here to download ENSHGLG00000013939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000013939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000013939	PRDM12	68	45.570	ENSHGLG00000003010	PRDM5	96	45.570
ENSHGLG00000013939	PRDM12	74	41.558	ENSHGLG00000008901	ZFP64	73	41.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000013939	PRDM12	100	95.913	ENSG00000130711	PRDM12	100	95.913	Homo_sapiens
ENSHGLG00000013939	PRDM12	99	61.741	ENSAPOG00000018234	-	93	65.988	Acanthochromis_polyacanthus
ENSHGLG00000013939	PRDM12	99	74.026	ENSAPOG00000016051	prdm12b	90	80.290	Acanthochromis_polyacanthus
ENSHGLG00000013939	PRDM12	88	93.498	ENSAMEG00000016234	PRDM12	99	93.498	Ailuropoda_melanoleuca
ENSHGLG00000013939	PRDM12	99	74.211	ENSACIG00000019578	prdm12b	90	80.882	Amphilophus_citrinellus
ENSHGLG00000013939	PRDM12	99	74.611	ENSACIG00000005193	-	93	78.754	Amphilophus_citrinellus
ENSHGLG00000013939	PRDM12	99	75.328	ENSAOCG00000015040	prdm12b	90	81.818	Amphiprion_ocellaris
ENSHGLG00000013939	PRDM12	99	75.926	ENSAPEG00000015092	prdm12b	90	82.544	Amphiprion_percula
ENSHGLG00000013939	PRDM12	100	71.354	ENSAPEG00000022849	-	88	77.941	Amphiprion_percula
ENSHGLG00000013939	PRDM12	99	73.506	ENSATEG00000014595	-	96	81.459	Anabas_testudineus
ENSHGLG00000013939	PRDM12	93	97.059	ENSANAG00000020616	PRDM12	100	97.059	Aotus_nancymaae
ENSHGLG00000013939	PRDM12	99	77.384	ENSACLG00000011876	prdm12b	92	81.845	Astatotilapia_calliptera
ENSHGLG00000013939	PRDM12	91	80.516	ENSACLG00000007631	-	89	80.229	Astatotilapia_calliptera
ENSHGLG00000013939	PRDM12	99	76.923	ENSAMXG00000008540	PRDM12	90	83.129	Astyanax_mexicanus
ENSHGLG00000013939	PRDM12	99	81.892	ENSAMXG00000033665	prdm12b	90	87.725	Astyanax_mexicanus
ENSHGLG00000013939	PRDM12	100	95.890	ENSBTAG00000023797	PRDM12	100	95.890	Bos_taurus
ENSHGLG00000013939	PRDM12	100	95.342	ENSCJAG00000020540	PRDM12	100	95.342	Callithrix_jacchus
ENSHGLG00000013939	PRDM12	80	96.220	ENSCAFG00000023076	PRDM12	90	96.552	Canis_familiaris
ENSHGLG00000013939	PRDM12	100	96.986	ENSCAFG00020024046	PRDM12	100	96.986	Canis_lupus_dingo
ENSHGLG00000013939	PRDM12	100	96.438	ENSCHIG00000025005	PRDM12	100	96.438	Capra_hircus
ENSHGLG00000013939	PRDM12	92	93.750	ENSCPOG00000005901	PRDM12	95	98.722	Cavia_porcellus
ENSHGLG00000013939	PRDM12	100	96.164	ENSCCAG00000037485	PRDM12	100	96.164	Cebus_capucinus
ENSHGLG00000013939	PRDM12	100	96.164	ENSCATG00000020327	PRDM12	100	96.164	Cercocebus_atys
ENSHGLG00000013939	PRDM12	100	91.781	ENSCLAG00000005499	PRDM12	100	91.781	Chinchilla_lanigera
ENSHGLG00000013939	PRDM12	100	96.438	ENSCSAG00000014756	PRDM12	100	96.438	Chlorocebus_sabaeus
ENSHGLG00000013939	PRDM12	100	87.671	ENSCPBG00000022628	PRDM12	94	91.916	Chrysemys_picta_bellii
ENSHGLG00000013939	PRDM12	100	97.268	ENSCGRG00001015005	Prdm12	100	97.268	Cricetulus_griseus_chok1gshd
ENSHGLG00000013939	PRDM12	99	76.203	ENSCVAG00000017166	prdm12b	90	82.635	Cyprinodon_variegatus
ENSHGLG00000013939	PRDM12	99	72.564	ENSCVAG00000000944	-	91	77.401	Cyprinodon_variegatus
ENSHGLG00000013939	PRDM12	99	80.161	ENSDARG00000007430	prdm12b	90	87.234	Danio_rerio
ENSHGLG00000013939	PRDM12	99	95.068	ENSDNOG00000042302	PRDM12	99	95.068	Dasypus_novemcinctus
ENSHGLG00000013939	PRDM12	88	62.678	ENSEBUG00000016780	prdm12b	78	64.672	Eptatretus_burgeri
ENSHGLG00000013939	PRDM12	100	96.438	ENSEASG00005008472	PRDM12	100	96.438	Equus_asinus_asinus
ENSHGLG00000013939	PRDM12	100	96.164	ENSECAG00000005933	PRDM12	100	96.164	Equus_caballus
ENSHGLG00000013939	PRDM12	99	76.923	ENSELUG00000013674	PRDM12	89	84.259	Esox_lucius
ENSHGLG00000013939	PRDM12	99	78.933	ENSELUG00000009905	prdm12b	91	85.119	Esox_lucius
ENSHGLG00000013939	PRDM12	100	96.712	ENSFCAG00000043086	PRDM12	100	96.712	Felis_catus
ENSHGLG00000013939	PRDM12	100	87.671	ENSFALG00000001445	PRDM12	84	91.916	Ficedula_albicollis
ENSHGLG00000013939	PRDM12	99	73.146	ENSFHEG00000007746	-	88	80.294	Fundulus_heteroclitus
ENSHGLG00000013939	PRDM12	99	75.862	ENSFHEG00000003944	prdm12b	90	82.493	Fundulus_heteroclitus
ENSHGLG00000013939	PRDM12	89	83.283	ENSGMOG00000011797	prdm12b	93	82.675	Gadus_morhua
ENSHGLG00000013939	PRDM12	100	87.671	ENSGALG00000003895	PRDM12	94	91.916	Gallus_gallus
ENSHGLG00000013939	PRDM12	100	78.133	ENSGAFG00000010827	prdm12b	90	82.738	Gambusia_affinis
ENSHGLG00000013939	PRDM12	100	76.903	ENSGACG00000016713	prdm12b	91	83.432	Gasterosteus_aculeatus
ENSHGLG00000013939	PRDM12	100	87.945	ENSGAGG00000014083	PRDM12	94	92.216	Gopherus_agassizii
ENSHGLG00000013939	PRDM12	100	95.902	ENSGGOG00000010568	PRDM12	100	95.902	Gorilla_gorilla
ENSHGLG00000013939	PRDM12	91	80.516	ENSHBUG00000022537	-	82	80.229	Haplochromis_burtoni
ENSHGLG00000013939	PRDM12	99	75.926	ENSHBUG00000022878	prdm12b	91	80.994	Haplochromis_burtoni
ENSHGLG00000013939	PRDM12	89	80.409	ENSHCOG00000003663	prdm12b	88	80.058	Hippocampus_comes
ENSHGLG00000013939	PRDM12	99	72.237	ENSHCOG00000021167	-	94	76.716	Hippocampus_comes
ENSHGLG00000013939	PRDM12	99	81.081	ENSIPUG00000017053	prdm12b	91	86.826	Ictalurus_punctatus
ENSHGLG00000013939	PRDM12	99	75.272	ENSIPUG00000019544	PRDM12	90	82.012	Ictalurus_punctatus
ENSHGLG00000013939	PRDM12	99	93.646	ENSSTOG00000005986	PRDM12	87	98.204	Ictidomys_tridecemlineatus
ENSHGLG00000013939	PRDM12	90	99.091	ENSJJAG00000005424	Prdm12	100	99.091	Jaculus_jaculus
ENSHGLG00000013939	PRDM12	90	78.212	ENSKMAG00000016921	prdm12b	90	77.686	Kryptolebias_marmoratus
ENSHGLG00000013939	PRDM12	99	75.477	ENSKMAG00000021205	-	92	81.651	Kryptolebias_marmoratus
ENSHGLG00000013939	PRDM12	99	76.455	ENSLBEG00000017769	prdm12b	88	83.533	Labrus_bergylta
ENSHGLG00000013939	PRDM12	99	74.211	ENSLBEG00000007776	-	89	80.712	Labrus_bergylta
ENSHGLG00000013939	PRDM12	99	85.165	ENSLACG00000017560	PRDM12	94	89.189	Latimeria_chalumnae
ENSHGLG00000013939	PRDM12	99	80.601	ENSLOCG00000005429	prdm12b	90	88.037	Lepisosteus_oculatus
ENSHGLG00000013939	PRDM12	92	95.882	ENSLAFG00000006979	PRDM12	91	95.882	Loxodonta_africana
ENSHGLG00000013939	PRDM12	100	92.098	ENSMFAG00000040322	PRDM12	91	97.006	Macaca_fascicularis
ENSHGLG00000013939	PRDM12	100	96.164	ENSMNEG00000037234	PRDM12	100	96.164	Macaca_nemestrina
ENSHGLG00000013939	PRDM12	89	80.952	ENSMAMG00000018988	-	86	80.952	Mastacembelus_armatus
ENSHGLG00000013939	PRDM12	99	75.260	ENSMAMG00000013212	prdm12b	90	83.086	Mastacembelus_armatus
ENSHGLG00000013939	PRDM12	91	80.516	ENSMZEG00005000415	PRDM12	88	80.229	Maylandia_zebra
ENSHGLG00000013939	PRDM12	93	91.789	ENSMGAG00000005438	PRDM12	94	91.916	Meleagris_gallopavo
ENSHGLG00000013939	PRDM12	100	96.164	ENSMAUG00000013040	Prdm12	92	97.605	Mesocricetus_auratus
ENSHGLG00000013939	PRDM12	100	95.342	ENSMICG00000015480	PRDM12	100	95.342	Microcebus_murinus
ENSHGLG00000013939	PRDM12	98	94.382	ENSMOCG00000021026	Prdm12	93	97.661	Microtus_ochrogaster
ENSHGLG00000013939	PRDM12	100	89.589	ENSMODG00000012108	PRDM12	94	94.012	Monodelphis_domestica
ENSHGLG00000013939	PRDM12	99	66.133	ENSMALG00000021901	prdm12b	88	71.171	Monopterus_albus
ENSHGLG00000013939	PRDM12	100	97.260	MGP_CAROLIEiJ_G0023414	Prdm12	100	97.260	Mus_caroli
ENSHGLG00000013939	PRDM12	100	97.260	ENSMUSG00000079466	Prdm12	100	97.260	Mus_musculus
ENSHGLG00000013939	PRDM12	100	97.260	MGP_PahariEiJ_G0024871	Prdm12	100	97.260	Mus_pahari
ENSHGLG00000013939	PRDM12	100	97.260	MGP_SPRETEiJ_G0024331	Prdm12	100	97.260	Mus_spretus
ENSHGLG00000013939	PRDM12	90	97.859	ENSNGAG00000018480	Prdm12	94	97.590	Nannospalax_galili
ENSHGLG00000013939	PRDM12	99	72.000	ENSNBRG00000024312	-	95	76.765	Neolamprologus_brichardi
ENSHGLG00000013939	PRDM12	99	74.803	ENSNBRG00000006727	prdm12b	91	80.290	Neolamprologus_brichardi
ENSHGLG00000013939	PRDM12	100	79.726	ENSMEUG00000003828	PRDM12	94	83.234	Notamacropus_eugenii
ENSHGLG00000013939	PRDM12	90	96.970	ENSOPRG00000008680	PRDM12	100	96.970	Ochotona_princeps
ENSHGLG00000013939	PRDM12	94	98.542	ENSODEG00000016282	PRDM12	64	98.542	Octodon_degus
ENSHGLG00000013939	PRDM12	62	88.158	ENSOANG00000001043	PRDM12	91	95.939	Ornithorhynchus_anatinus
ENSHGLG00000013939	PRDM12	86	92.013	ENSOCUG00000008241	PRDM12	99	91.961	Oryctolagus_cuniculus
ENSHGLG00000013939	PRDM12	99	72.051	ENSORLG00000017558	-	89	78.161	Oryzias_latipes
ENSHGLG00000013939	PRDM12	100	75.718	ENSORLG00000007114	prdm12b	92	80.692	Oryzias_latipes
ENSHGLG00000013939	PRDM12	99	71.867	ENSORLG00020013167	-	89	77.937	Oryzias_latipes_hni
ENSHGLG00000013939	PRDM12	99	75.397	ENSORLG00020019565	prdm12b	91	80.403	Oryzias_latipes_hni
ENSHGLG00000013939	PRDM12	90	80.115	ENSORLG00015007621	prdm12b	92	80.460	Oryzias_latipes_hsok
ENSHGLG00000013939	PRDM12	99	72.051	ENSORLG00015003435	-	89	78.161	Oryzias_latipes_hsok
ENSHGLG00000013939	PRDM12	100	75.065	ENSOMEG00000004134	prdm12b	91	80.286	Oryzias_melastigma
ENSHGLG00000013939	PRDM12	99	73.127	ENSOMEG00000007762	-	95	77.401	Oryzias_melastigma
ENSHGLG00000013939	PRDM12	91	98.187	ENSOGAG00000007557	PRDM12	99	98.187	Otolemur_garnettii
ENSHGLG00000013939	PRDM12	79	96.516	ENSPPAG00000031506	-	99	94.881	Pan_paniscus
ENSHGLG00000013939	PRDM12	100	85.246	ENSPPRG00000023024	PRDM12	86	89.254	Panthera_pardus
ENSHGLG00000013939	PRDM12	100	96.175	ENSPTRG00000021475	PRDM12	100	96.175	Pan_troglodytes
ENSHGLG00000013939	PRDM12	100	96.175	ENSPTRG00000043324	-	100	96.175	Pan_troglodytes
ENSHGLG00000013939	PRDM12	100	96.164	ENSPANG00000025967	PRDM12	100	96.164	Papio_anubis
ENSHGLG00000013939	PRDM12	99	80.267	ENSPKIG00000007228	prdm12b	91	85.546	Paramormyrops_kingsleyae
ENSHGLG00000013939	PRDM12	93	77.778	ENSPKIG00000004305	PRDM12	94	79.940	Paramormyrops_kingsleyae
ENSHGLG00000013939	PRDM12	100	87.671	ENSPSIG00000006739	PRDM12	94	91.916	Pelodiscus_sinensis
ENSHGLG00000013939	PRDM12	100	77.273	ENSPMGG00000008867	prdm12b	91	82.840	Periophthalmus_magnuspinnatus
ENSHGLG00000013939	PRDM12	99	72.987	ENSPMGG00000002356	-	87	80.952	Periophthalmus_magnuspinnatus
ENSHGLG00000013939	PRDM12	99	92.798	ENSPEMG00000009969	Prdm12	91	98.489	Peromyscus_maniculatus_bairdii
ENSHGLG00000013939	PRDM12	100	89.863	ENSPCIG00000024119	PRDM12	94	94.311	Phascolarctos_cinereus
ENSHGLG00000013939	PRDM12	99	77.660	ENSPFOG00000019841	prdm12b	92	82.353	Poecilia_formosa
ENSHGLG00000013939	PRDM12	90	83.036	ENSPLAG00000016626	prdm12b	89	83.036	Poecilia_latipinna
ENSHGLG00000013939	PRDM12	97	76.087	ENSPMEG00000016698	prdm12b	89	82.515	Poecilia_mexicana
ENSHGLG00000013939	PRDM12	100	76.440	ENSPREG00000015073	prdm12b	89	82.891	Poecilia_reticulata
ENSHGLG00000013939	PRDM12	96	72.727	ENSPREG00000003211	-	91	76.970	Poecilia_reticulata
ENSHGLG00000013939	PRDM12	96	94.872	ENSPPYG00000019694	PRDM12	95	96.707	Pongo_abelii
ENSHGLG00000013939	PRDM12	100	96.721	ENSPCOG00000022255	PRDM12	100	96.721	Propithecus_coquereli
ENSHGLG00000013939	PRDM12	100	96.175	ENSPVAG00000001511	PRDM12	100	96.175	Pteropus_vampyrus
ENSHGLG00000013939	PRDM12	99	75.263	ENSPNYG00000009607	prdm12b	91	80.233	Pundamilia_nyererei
ENSHGLG00000013939	PRDM12	91	80.516	ENSPNYG00000013589	-	88	80.229	Pundamilia_nyererei
ENSHGLG00000013939	PRDM12	99	74.194	ENSPNAG00000013396	PRDM12	88	80.243	Pygocentrus_nattereri
ENSHGLG00000013939	PRDM12	99	82.162	ENSPNAG00000024532	prdm12b	91	88.024	Pygocentrus_nattereri
ENSHGLG00000013939	PRDM12	100	97.260	ENSRNOG00000009218	Prdm12	100	97.260	Rattus_norvegicus
ENSHGLG00000013939	PRDM12	87	97.476	ENSRBIG00000042712	PRDM12	91	95.137	Rhinopithecus_bieti
ENSHGLG00000013939	PRDM12	88	97.508	ENSRROG00000043554	PRDM12	100	97.508	Rhinopithecus_roxellana
ENSHGLG00000013939	PRDM12	100	89.071	ENSSHAG00000015972	PRDM12	94	93.433	Sarcophilus_harrisii
ENSHGLG00000013939	PRDM12	90	79.487	ENSSMAG00000003754	prdm12b	90	79.772	Scophthalmus_maximus
ENSHGLG00000013939	PRDM12	93	81.395	ENSSDUG00000019071	-	90	83.792	Seriola_dumerili
ENSHGLG00000013939	PRDM12	99	74.809	ENSSDUG00000023498	prdm12b	90	80.925	Seriola_dumerili
ENSHGLG00000013939	PRDM12	99	77.596	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSHGLG00000013939	PRDM12	99	75.128	ENSSLDG00000009557	prdm12b	90	81.341	Seriola_lalandi_dorsalis
ENSHGLG00000013939	PRDM12	100	87.397	ENSSPUG00000013424	PRDM12	94	91.617	Sphenodon_punctatus
ENSHGLG00000013939	PRDM12	89	71.681	ENSSPAG00000022420	-	87	74.154	Stegastes_partitus
ENSHGLG00000013939	PRDM12	99	75.131	ENSSPAG00000018824	prdm12b	90	81.871	Stegastes_partitus
ENSHGLG00000013939	PRDM12	100	96.986	ENSSSCG00000005703	PRDM12	100	96.986	Sus_scrofa
ENSHGLG00000013939	PRDM12	99	76.253	ENSTRUG00000018659	prdm12b	90	83.735	Takifugu_rubripes
ENSHGLG00000013939	PRDM12	99	74.731	ENSTRUG00000013239	-	93	81.024	Takifugu_rubripes
ENSHGLG00000013939	PRDM12	99	76.579	ENSTNIG00000009020	prdm12b	92	82.799	Tetraodon_nigroviridis
ENSHGLG00000013939	PRDM12	99	74.595	ENSTNIG00000005859	-	92	80.303	Tetraodon_nigroviridis
ENSHGLG00000013939	PRDM12	96	96.562	ENSUAMG00000009653	PRDM12	97	96.562	Ursus_americanus
ENSHGLG00000013939	PRDM12	91	98.187	ENSVVUG00000027662	PRDM12	79	98.187	Vulpes_vulpes
ENSHGLG00000013939	PRDM12	90	82.738	ENSXCOG00000002836	prdm12b	90	82.738	Xiphophorus_couchianus
ENSHGLG00000013939	PRDM12	99	73.438	ENSXMAG00000028012	-	88	79.706	Xiphophorus_maculatus
ENSHGLG00000013939	PRDM12	89	82.934	ENSXMAG00000005537	prdm12b	89	82.934	Xiphophorus_maculatus