EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000014165 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 45207 bases
Position: chrJH602060.1:23219309-23264515
Accession: 101724987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000019786	ResIII	PF04851.15	8.7e-08	1	1
ENSHGLP00000019785	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000019984	-	3771	-	ENSHGLP00000019786	1256 (aa)	-	-
ENSHGLT00000019983	-	5527	XM_004843943	ENSHGLP00000019785	1392 (aa)	XP_004844000	UPI000350178A

Gene Model

Click here to download ENSHGLG00000014165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000014165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000014165	-	82	55.524	ENSHGLG00000008739	SBNO2	70	68.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000014165	-	99	99.277	ENSG00000139697	SBNO1	100	97.128	Homo_sapiens
ENSHGLG00000014165	-	82	80.997	ENSAPOG00000003196	sbno1	98	80.911	Acanthochromis_polyacanthus
ENSHGLG00000014165	-	99	99.277	ENSAMEG00000015151	SBNO1	100	97.421	Ailuropoda_melanoleuca
ENSHGLG00000014165	-	99	74.489	ENSACIG00000008088	sbno1	94	82.888	Amphilophus_citrinellus
ENSHGLG00000014165	-	99	83.273	ENSAOCG00000014859	sbno1	94	83.666	Amphiprion_ocellaris
ENSHGLG00000014165	-	99	83.273	ENSAPEG00000006069	sbno1	94	83.666	Amphiprion_percula
ENSHGLG00000014165	-	99	84.991	ENSATEG00000006667	sbno1	95	84.964	Anabas_testudineus
ENSHGLG00000014165	-	99	94.756	ENSAPLG00000015674	SBNO1	100	91.750	Anas_platyrhynchos
ENSHGLG00000014165	-	100	87.358	ENSACAG00000015441	SBNO1	84	94.203	Anolis_carolinensis
ENSHGLG00000014165	-	99	98.734	ENSANAG00000029958	-	99	98.734	Aotus_nancymaae
ENSHGLG00000014165	-	99	73.869	ENSACLG00000024913	sbno1	99	74.552	Astatotilapia_calliptera
ENSHGLG00000014165	-	99	87.207	ENSAMXG00000019473	sbno1	94	87.296	Astyanax_mexicanus
ENSHGLG00000014165	-	99	98.913	ENSBTAG00000020505	SBNO1	99	97.701	Bos_taurus
ENSHGLG00000014165	-	100	96.985	ENSCJAG00000016599	SBNO1	100	96.985	Callithrix_jacchus
ENSHGLG00000014165	-	99	98.919	ENSCAFG00000007503	SBNO1	100	97.348	Canis_familiaris
ENSHGLG00000014165	-	100	96.626	ENSCAFG00020015363	SBNO1	100	96.626	Canis_lupus_dingo
ENSHGLG00000014165	-	99	98.913	ENSCHIG00000008382	SBNO1	99	98.919	Capra_hircus
ENSHGLG00000014165	-	99	99.458	ENSTSYG00000012749	SBNO1	100	97.559	Carlito_syrichta
ENSHGLG00000014165	-	96	99.638	ENSCAPG00000000384	SBNO1	99	99.640	Cavia_aperea
ENSHGLG00000014165	-	99	99.638	ENSCPOG00000008109	SBNO1	100	99.640	Cavia_porcellus
ENSHGLG00000014165	-	100	92.611	ENSCCAG00000035316	SBNO1	100	92.611	Cebus_capucinus
ENSHGLG00000014165	-	99	95.461	ENSCATG00000008239	SBNO1	98	99.101	Cercocebus_atys
ENSHGLG00000014165	-	99	99.638	ENSCLAG00000008995	SBNO1	100	98.420	Chinchilla_lanigera
ENSHGLG00000014165	-	83	98.359	ENSCSAG00000002064	SBNO1	100	98.359	Chlorocebus_sabaeus
ENSHGLG00000014165	-	95	98.086	ENSCHOG00000008814	SBNO1	91	100.000	Choloepus_hoffmanni
ENSHGLG00000014165	-	99	93.993	ENSCPBG00000025968	SBNO1	99	91.750	Chrysemys_picta_bellii
ENSHGLG00000014165	-	100	91.971	ENSCANG00000042688	-	100	91.900	Colobus_angolensis_palliatus
ENSHGLG00000014165	-	99	98.011	ENSCGRG00001017470	Sbno1	99	98.011	Cricetulus_griseus_chok1gshd
ENSHGLG00000014165	-	99	98.011	ENSCGRG00000004756	Sbno1	99	98.011	Cricetulus_griseus_crigri
ENSHGLG00000014165	-	99	83.094	ENSCSEG00000011919	sbno1	95	83.666	Cynoglossus_semilaevis
ENSHGLG00000014165	-	99	83.633	ENSCVAG00000007038	sbno1	95	84.029	Cyprinodon_variegatus
ENSHGLG00000014165	-	99	86.933	ENSDARG00000099080	sbno1	94	87.044	Danio_rerio
ENSHGLG00000014165	-	100	95.511	ENSDNOG00000017147	SBNO1	98	96.917	Dasypus_novemcinctus
ENSHGLG00000014165	-	100	83.381	ENSDORG00000015261	Sbno1	100	83.381	Dipodomys_ordii
ENSHGLG00000014165	-	91	99.275	ENSETEG00000005620	SBNO1	93	90.909	Echinops_telfairi
ENSHGLG00000014165	-	72	81.776	ENSEBUG00000013823	sbno1	85	86.802	Eptatretus_burgeri
ENSHGLG00000014165	-	53	91.667	ENSEASG00005012595	-	92	93.371	Equus_asinus_asinus
ENSHGLG00000014165	-	99	99.458	ENSECAG00000006127	SBNO1	100	97.918	Equus_caballus
ENSHGLG00000014165	-	83	98.901	ENSEEUG00000003793	SBNO1	83	98.901	Erinaceus_europaeus
ENSHGLG00000014165	-	99	77.598	ENSELUG00000002886	sbno1	94	87.114	Esox_lucius
ENSHGLG00000014165	-	99	99.275	ENSFCAG00000015331	SBNO1	99	97.917	Felis_catus
ENSHGLG00000014165	-	99	94.937	ENSFALG00000009273	SBNO1	100	91.894	Ficedula_albicollis
ENSHGLG00000014165	-	99	97.196	ENSFDAG00000014232	SBNO1	99	97.196	Fukomys_damarensis
ENSHGLG00000014165	-	99	83.813	ENSFHEG00000007360	sbno1	95	84.211	Fundulus_heteroclitus
ENSHGLG00000014165	-	96	82.092	ENSGMOG00000018229	sbno1	94	84.404	Gadus_morhua
ENSHGLG00000014165	-	87	95.025	ENSGALG00000003392	SBNO1	99	91.883	Gallus_gallus
ENSHGLG00000014165	-	99	75.847	ENSGAFG00000003960	sbno1	95	84.392	Gambusia_affinis
ENSHGLG00000014165	-	96	84.268	ENSGACG00000015633	sbno1	94	84.799	Gasterosteus_aculeatus
ENSHGLG00000014165	-	99	93.972	ENSGAGG00000001065	SBNO1	100	94.937	Gopherus_agassizii
ENSHGLG00000014165	-	99	99.277	ENSGGOG00000015000	SBNO1	99	99.277	Gorilla_gorilla
ENSHGLG00000014165	-	99	68.192	ENSHBUG00000011910	sbno1	99	68.879	Haplochromis_burtoni
ENSHGLG00000014165	-	91	85.178	ENSHCOG00000003246	sbno1	95	85.178	Hippocampus_comes
ENSHGLG00000014165	-	99	86.462	ENSIPUG00000015830	Sbno1	92	89.702	Ictalurus_punctatus
ENSHGLG00000014165	-	99	99.458	ENSSTOG00000023221	SBNO1	100	99.281	Ictidomys_tridecemlineatus
ENSHGLG00000014165	-	99	98.221	ENSJJAG00000001741	Sbno1	100	96.985	Jaculus_jaculus
ENSHGLG00000014165	-	99	75.424	ENSKMAG00000009696	sbno1	95	84.672	Kryptolebias_marmoratus
ENSHGLG00000014165	-	99	85.125	ENSLBEG00000007623	sbno1	95	85.662	Labrus_bergylta
ENSHGLG00000014165	-	99	81.714	ENSLACG00000017227	SBNO1	93	91.821	Latimeria_chalumnae
ENSHGLG00000014165	-	99	88.689	ENSLOCG00000005725	sbno1	92	89.292	Lepisosteus_oculatus
ENSHGLG00000014165	-	99	98.553	ENSLAFG00000002135	SBNO1	100	96.770	Loxodonta_africana
ENSHGLG00000014165	-	100	97.057	ENSMFAG00000031429	SBNO1	100	97.057	Macaca_fascicularis
ENSHGLG00000014165	-	100	97.057	ENSMMUG00000011496	SBNO1	100	97.057	Macaca_mulatta
ENSHGLG00000014165	-	100	95.334	ENSMLEG00000033260	SBNO1	99	99.277	Mandrillus_leucophaeus
ENSHGLG00000014165	-	99	81.900	ENSMAMG00000005473	sbno1	95	85.299	Mastacembelus_armatus
ENSHGLG00000014165	-	99	95.118	ENSMGAG00000003274	SBNO1	100	91.750	Meleagris_gallopavo
ENSHGLG00000014165	-	51	92.576	ENSMAUG00000004834	-	99	93.030	Mesocricetus_auratus
ENSHGLG00000014165	-	100	96.411	ENSMICG00000006573	-	100	96.411	Microcebus_murinus
ENSHGLG00000014165	-	100	94.523	ENSMOCG00000009390	Sbno1	99	98.373	Microtus_ochrogaster
ENSHGLG00000014165	-	99	84.936	ENSMMOG00000008691	sbno1	93	84.936	Mola_mola
ENSHGLG00000014165	-	99	94.109	ENSMODG00000012470	SBNO1	98	93.894	Monodelphis_domestica
ENSHGLG00000014165	-	99	82.796	ENSMALG00000001056	sbno1	95	83.485	Monopterus_albus
ENSHGLG00000014165	-	99	99.094	MGP_CAROLIEiJ_G0027749	Sbno1	99	96.336	Mus_caroli
ENSHGLG00000014165	-	99	99.094	ENSMUSG00000038095	Sbno1	99	96.839	Mus_musculus
ENSHGLG00000014165	-	99	96.839	MGP_PahariEiJ_G0024329	Sbno1	99	96.839	Mus_pahari
ENSHGLG00000014165	-	99	99.094	MGP_SPRETEiJ_G0028747	Sbno1	99	96.624	Mus_spretus
ENSHGLG00000014165	-	99	99.277	ENSMPUG00000001658	SBNO1	100	97.703	Mustela_putorius_furo
ENSHGLG00000014165	-	99	98.553	ENSMLUG00000017159	SBNO1	100	97.200	Myotis_lucifugus
ENSHGLG00000014165	-	99	99.096	ENSNGAG00000012620	Sbno1	100	97.416	Nannospalax_galili
ENSHGLG00000014165	-	99	73.816	ENSNBRG00000019189	sbno1	99	74.284	Neolamprologus_brichardi
ENSHGLG00000014165	-	100	93.180	ENSNLEG00000001502	SBNO1	100	93.180	Nomascus_leucogenys
ENSHGLG00000014165	-	59	95.699	ENSMEUG00000008768	-	86	95.699	Notamacropus_eugenii
ENSHGLG00000014165	-	99	97.473	ENSOPRG00000011054	SBNO1	100	93.907	Ochotona_princeps
ENSHGLG00000014165	-	99	99.638	ENSODEG00000009997	SBNO1	100	99.640	Octodon_degus
ENSHGLG00000014165	-	99	75.229	ENSONIG00000015348	sbno1	95	84.124	Oreochromis_niloticus
ENSHGLG00000014165	-	98	95.624	ENSOCUG00000002441	SBNO1	95	95.624	Oryctolagus_cuniculus
ENSHGLG00000014165	-	99	82.616	ENSORLG00000001593	sbno1	95	83.122	Oryzias_latipes
ENSHGLG00000014165	-	99	82.616	ENSORLG00020015216	sbno1	95	83.122	Oryzias_latipes_hni
ENSHGLG00000014165	-	99	82.796	ENSORLG00015002726	sbno1	95	83.303	Oryzias_latipes_hsok
ENSHGLG00000014165	-	99	82.914	ENSOMEG00000019313	sbno1	94	83.424	Oryzias_melastigma
ENSHGLG00000014165	-	51	89.864	ENSOGAG00000010781	-	99	89.864	Otolemur_garnettii
ENSHGLG00000014165	-	99	98.913	ENSOARG00000004404	SBNO1	99	97.274	Ovis_aries
ENSHGLG00000014165	-	99	99.096	ENSPPAG00000024635	SBNO1	99	99.096	Pan_paniscus
ENSHGLG00000014165	-	99	99.275	ENSPPRG00000022092	SBNO1	99	97.917	Panthera_pardus
ENSHGLG00000014165	-	99	99.277	ENSPTIG00000017803	SBNO1	100	97.703	Panthera_tigris_altaica
ENSHGLG00000014165	-	99	99.277	ENSPTRG00000005597	SBNO1	99	99.277	Pan_troglodytes
ENSHGLG00000014165	-	100	97.057	ENSPANG00000011640	SBNO1	99	99.277	Papio_anubis
ENSHGLG00000014165	-	99	85.841	ENSPKIG00000001441	sbno1	94	87.091	Paramormyrops_kingsleyae
ENSHGLG00000014165	-	91	90.222	ENSPSIG00000009256	-	100	87.801	Pelodiscus_sinensis
ENSHGLG00000014165	-	100	92.933	ENSPSIG00000009572	-	100	91.422	Pelodiscus_sinensis
ENSHGLG00000014165	-	99	98.011	ENSPEMG00000016087	Sbno1	99	98.011	Peromyscus_maniculatus_bairdii
ENSHGLG00000014165	-	99	93.539	ENSPCIG00000010985	SBNO1	99	93.611	Phascolarctos_cinereus
ENSHGLG00000014165	-	99	83.993	ENSPFOG00000005069	sbno1	95	84.392	Poecilia_formosa
ENSHGLG00000014165	-	99	83.993	ENSPLAG00000015015	sbno1	95	84.392	Poecilia_latipinna
ENSHGLG00000014165	-	99	83.993	ENSPMEG00000021212	sbno1	95	84.392	Poecilia_mexicana
ENSHGLG00000014165	-	99	83.633	ENSPREG00000017746	sbno1	95	84.029	Poecilia_reticulata
ENSHGLG00000014165	-	100	96.841	ENSPPYG00000005084	SBNO1	100	96.841	Pongo_abelii
ENSHGLG00000014165	-	89	91.233	ENSPCAG00000008634	SBNO1	88	91.310	Procavia_capensis
ENSHGLG00000014165	-	99	98.915	ENSPCOG00000024277	SBNO1	99	98.909	Propithecus_coquereli
ENSHGLG00000014165	-	92	99.206	ENSPVAG00000015304	SBNO1	87	99.206	Pteropus_vampyrus
ENSHGLG00000014165	-	99	75.336	ENSPNYG00000004291	sbno1	95	84.124	Pundamilia_nyererei
ENSHGLG00000014165	-	99	88.087	ENSPNAG00000015622	sbno1	95	88.203	Pygocentrus_nattereri
ENSHGLG00000014165	-	99	99.094	ENSRNOG00000001064	Sbno1	99	99.094	Rattus_norvegicus
ENSHGLG00000014165	-	100	97.200	ENSRROG00000034230	SBNO1	99	99.277	Rhinopithecus_roxellana
ENSHGLG00000014165	-	97	92.262	ENSSBOG00000015422	SBNO1	100	92.262	Saimiri_boliviensis_boliviensis
ENSHGLG00000014165	-	99	86.511	ENSSFOG00015019025	sbno1	94	86.909	Scleropages_formosus
ENSHGLG00000014165	-	99	83.453	ENSSMAG00000013640	sbno1	95	84.029	Scophthalmus_maximus
ENSHGLG00000014165	-	99	84.810	ENSSDUG00000023480	sbno1	95	85.118	Seriola_dumerili
ENSHGLG00000014165	-	99	84.810	ENSSLDG00000007928	sbno1	95	85.118	Seriola_lalandi_dorsalis
ENSHGLG00000014165	-	90	98.399	ENSSARG00000002594	SBNO1	89	98.058	Sorex_araneus
ENSHGLG00000014165	-	100	88.881	ENSSPUG00000012640	SBNO1	100	88.801	Sphenodon_punctatus
ENSHGLG00000014165	-	99	83.453	ENSSPAG00000016244	sbno1	95	83.848	Stegastes_partitus
ENSHGLG00000014165	-	99	99.458	ENSSSCG00000009776	SBNO1	100	97.631	Sus_scrofa
ENSHGLG00000014165	-	99	95.118	ENSTGUG00000005380	SBNO1	100	91.822	Taeniopygia_guttata
ENSHGLG00000014165	-	99	84.144	ENSTRUG00000018490	sbno1	95	84.854	Takifugu_rubripes
ENSHGLG00000014165	-	56	70.247	ENSTNIG00000013506	sbno1	99	70.807	Tetraodon_nigroviridis
ENSHGLG00000014165	-	99	99.277	ENSUAMG00000019671	SBNO1	100	97.775	Ursus_americanus
ENSHGLG00000014165	-	99	99.277	ENSUMAG00000004002	SBNO1	100	97.775	Ursus_maritimus
ENSHGLG00000014165	-	95	95.652	ENSVPAG00000007024	SBNO1	95	95.652	Vicugna_pacos
ENSHGLG00000014165	-	99	99.277	ENSVVUG00000027807	SBNO1	100	97.559	Vulpes_vulpes
ENSHGLG00000014165	-	99	91.771	ENSXETG00000031930	SBNO1	94	92.909	Xenopus_tropicalis
ENSHGLG00000014165	-	89	74.521	ENSXCOG00000011607	sbno1	90	86.053	Xiphophorus_couchianus
ENSHGLG00000014165	-	99	83.633	ENSXMAG00000002140	sbno1	95	84.029	Xiphophorus_maculatus