EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000014938 (Gene tree)
Gene ID: -
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 198794 bases
Position: chrJH602070.1:3373703-3572496
Accession: 101702180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000020902	ResIII	PF04851.15	1.1e-06	1	1
ENSHGLP00000020901	ResIII	PF04851.15	1.4e-06	1	1
ENSHGLP00000020901	BRK	PF07533.16	3.3e-31	1	2
ENSHGLP00000020901	BRK	PF07533.16	3.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000021106	CHD9-203	2762	-	ENSHGLP00000020903	642 (aa)	-	-
ENSHGLT00000021105	CHD9-202	3411	-	ENSHGLP00000020902	874 (aa)	-	-
ENSHGLT00000021104	CHD9-201	8649	XM_004847923	ENSHGLP00000020901	2882 (aa)	XP_004847980	-

Gene Model

Click here to download ENSHGLG00000014938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000014938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000014938	CHD9	55	35.448	ENSHGLG00000005070	SMARCAD1	50	35.634
ENSHGLG00000014938	CHD9	54	31.412	ENSHGLG00000000753	RAD54L	66	31.610
ENSHGLG00000014938	CHD9	58	30.576	ENSHGLG00000008263	RAD54B	58	30.576
ENSHGLG00000014938	CHD9	54	40.041	ENSHGLG00000006537	-	83	39.366
ENSHGLG00000014938	CHD9	56	38.788	ENSHGLG00000000317	-	56	35.987
ENSHGLG00000014938	CHD9	54	38.574	ENSHGLG00000011377	-	72	37.398
ENSHGLG00000014938	CHD9	90	68.625	ENSHGLG00000004548	CHD6	79	62.830
ENSHGLG00000014938	CHD9	56	42.771	ENSHGLG00000008933	CHD1L	56	41.495
ENSHGLG00000014938	CHD9	56	44.040	ENSHGLG00000000816	-	57	39.905
ENSHGLG00000014938	CHD9	57	43.426	ENSHGLG00000003080	SMARCA1	59	39.024
ENSHGLG00000014938	CHD9	96	72.462	ENSHGLG00000003559	CHD8	72	68.488
ENSHGLG00000014938	CHD9	82	76.290	ENSHGLG00000017268	CHD7	95	54.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000014938	CHD9	100	98.055	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSHGLG00000014938	CHD9	96	80.975	ENSAPOG00000023034	chd9	98	68.828	Acanthochromis_polyacanthus
ENSHGLG00000014938	CHD9	99	97.341	ENSAMEG00000016232	CHD9	100	94.800	Ailuropoda_melanoleuca
ENSHGLG00000014938	CHD9	96	74.197	ENSACIG00000004097	chd9	73	60.982	Amphilophus_citrinellus
ENSHGLG00000014938	CHD9	96	80.975	ENSAOCG00000005487	chd9	98	69.403	Amphiprion_ocellaris
ENSHGLG00000014938	CHD9	96	80.975	ENSAPEG00000009859	chd9	97	69.281	Amphiprion_percula
ENSHGLG00000014938	CHD9	95	81.971	ENSATEG00000002748	chd9	99	62.119	Anabas_testudineus
ENSHGLG00000014938	CHD9	99	91.830	ENSAPLG00000002826	CHD9	74	85.828	Anas_platyrhynchos
ENSHGLG00000014938	CHD9	99	90.679	ENSACAG00000016150	CHD9	98	80.783	Anolis_carolinensis
ENSHGLG00000014938	CHD9	99	98.266	ENSANAG00000015630	CHD9	100	97.802	Aotus_nancymaae
ENSHGLG00000014938	CHD9	96	78.673	ENSACLG00000016899	chd9	99	61.287	Astatotilapia_calliptera
ENSHGLG00000014938	CHD9	99	76.914	ENSAMXG00000005652	chd9	99	68.135	Astyanax_mexicanus
ENSHGLG00000014938	CHD9	99	97.572	ENSBTAG00000002287	CHD9	100	94.178	Bos_taurus
ENSHGLG00000014938	CHD9	99	98.035	ENSCJAG00000001573	CHD9	100	98.168	Callithrix_jacchus
ENSHGLG00000014938	CHD9	99	97.225	ENSCAFG00000009699	CHD9	100	94.833	Canis_familiaris
ENSHGLG00000014938	CHD9	99	97.225	ENSCAFG00020002879	CHD9	100	99.267	Canis_lupus_dingo
ENSHGLG00000014938	CHD9	99	95.954	ENSCHIG00000021000	CHD9	75	94.930	Capra_hircus
ENSHGLG00000014938	CHD9	99	97.688	ENSTSYG00000007693	CHD9	100	98.901	Carlito_syrichta
ENSHGLG00000014938	CHD9	91	100.000	ENSCAPG00000011604	CHD9	82	80.404	Cavia_aperea
ENSHGLG00000014938	CHD9	100	93.772	ENSCPOG00000036544	CHD9	100	93.772	Cavia_porcellus
ENSHGLG00000014938	CHD9	99	98.035	ENSCCAG00000036178	CHD9	100	97.436	Cebus_capucinus
ENSHGLG00000014938	CHD9	99	98.035	ENSCATG00000036753	CHD9	100	98.168	Cercocebus_atys
ENSHGLG00000014938	CHD9	100	98.169	ENSCLAG00000007137	CHD9	100	98.169	Chinchilla_lanigera
ENSHGLG00000014938	CHD9	99	98.035	ENSCSAG00000005311	CHD9	100	94.596	Chlorocebus_sabaeus
ENSHGLG00000014938	CHD9	76	97.396	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSHGLG00000014938	CHD9	99	92.405	ENSCPBG00000012459	CHD9	99	91.908	Chrysemys_picta_bellii
ENSHGLG00000014938	CHD9	99	98.035	ENSCANG00000030349	CHD9	100	98.168	Colobus_angolensis_palliatus
ENSHGLG00000014938	CHD9	99	96.069	ENSCGRG00001016150	Chd9	99	91.873	Cricetulus_griseus_chok1gshd
ENSHGLG00000014938	CHD9	100	96.224	ENSCGRG00000012850	Chd9	100	96.224	Cricetulus_griseus_crigri
ENSHGLG00000014938	CHD9	94	79.493	ENSCSEG00000009209	chd9	67	72.955	Cynoglossus_semilaevis
ENSHGLG00000014938	CHD9	96	80.143	ENSCVAG00000016195	chd9	99	61.025	Cyprinodon_variegatus
ENSHGLG00000014938	CHD9	99	75.111	ENSDARG00000074498	chd9	98	68.163	Danio_rerio
ENSHGLG00000014938	CHD9	92	96.375	ENSDNOG00000006045	CHD9	100	93.750	Dasypus_novemcinctus
ENSHGLG00000014938	CHD9	69	92.357	ENSDORG00000008523	-	100	92.804	Dipodomys_ordii
ENSHGLG00000014938	CHD9	94	97.368	ENSETEG00000009565	CHD9	94	97.368	Echinops_telfairi
ENSHGLG00000014938	CHD9	99	97.688	ENSEASG00005014832	CHD9	100	94.798	Equus_asinus_asinus
ENSHGLG00000014938	CHD9	99	97.572	ENSECAG00000011505	CHD9	100	94.663	Equus_caballus
ENSHGLG00000014938	CHD9	83	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSHGLG00000014938	CHD9	97	79.977	ENSELUG00000006031	chd9	90	73.960	Esox_lucius
ENSHGLG00000014938	CHD9	99	97.110	ENSFCAG00000022534	CHD9	100	98.901	Felis_catus
ENSHGLG00000014938	CHD9	100	91.790	ENSFALG00000013276	CHD9	99	86.708	Ficedula_albicollis
ENSHGLG00000014938	CHD9	99	98.613	ENSFDAG00000021037	CHD9	100	97.585	Fukomys_damarensis
ENSHGLG00000014938	CHD9	96	80.262	ENSFHEG00000006068	chd9	87	67.209	Fundulus_heteroclitus
ENSHGLG00000014938	CHD9	94	76.562	ENSGMOG00000006040	chd9	83	76.594	Gadus_morhua
ENSHGLG00000014938	CHD9	99	91.945	ENSGALG00000039178	CHD9	98	84.937	Gallus_gallus
ENSHGLG00000014938	CHD9	96	80.380	ENSGAFG00000010014	chd9	98	68.047	Gambusia_affinis
ENSHGLG00000014938	CHD9	94	80.579	ENSGACG00000016694	chd9	93	74.786	Gasterosteus_aculeatus
ENSHGLG00000014938	CHD9	99	98.035	ENSGGOG00000014816	CHD9	100	98.535	Gorilla_gorilla
ENSHGLG00000014938	CHD9	96	79.241	ENSHBUG00000023322	chd9	96	69.930	Haplochromis_burtoni
ENSHGLG00000014938	CHD9	100	100.000	ENSHGLG00100001011	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000014938	CHD9	94	80.825	ENSHCOG00000000937	chd9	97	67.915	Hippocampus_comes
ENSHGLG00000014938	CHD9	96	80.401	ENSIPUG00000016448	chd9	97	73.723	Ictalurus_punctatus
ENSHGLG00000014938	CHD9	100	97.597	ENSSTOG00000022273	CHD9	100	97.597	Ictidomys_tridecemlineatus
ENSHGLG00000014938	CHD9	69	92.101	ENSJJAG00000015741	-	100	92.548	Jaculus_jaculus
ENSHGLG00000014938	CHD9	96	80.975	ENSKMAG00000016784	chd9	94	70.279	Kryptolebias_marmoratus
ENSHGLG00000014938	CHD9	99	76.269	ENSLBEG00000012077	chd9	95	68.902	Labrus_bergylta
ENSHGLG00000014938	CHD9	99	77.791	ENSLACG00000005557	CHD9	99	71.860	Latimeria_chalumnae
ENSHGLG00000014938	CHD9	100	81.818	ENSLOCG00000007225	chd9	68	79.593	Lepisosteus_oculatus
ENSHGLG00000014938	CHD9	99	96.647	ENSLAFG00000015374	CHD9	100	93.871	Loxodonta_africana
ENSHGLG00000014938	CHD9	99	98.035	ENSMFAG00000041354	CHD9	100	98.168	Macaca_fascicularis
ENSHGLG00000014938	CHD9	99	98.035	ENSMMUG00000016310	CHD9	100	98.168	Macaca_mulatta
ENSHGLG00000014938	CHD9	99	98.035	ENSMNEG00000031494	CHD9	100	95.107	Macaca_nemestrina
ENSHGLG00000014938	CHD9	99	98.035	ENSMLEG00000043219	CHD9	100	98.168	Mandrillus_leucophaeus
ENSHGLG00000014938	CHD9	94	79.879	ENSMAMG00000003909	chd9	98	60.731	Mastacembelus_armatus
ENSHGLG00000014938	CHD9	96	80.737	ENSMZEG00005006581	chd9	97	69.299	Maylandia_zebra
ENSHGLG00000014938	CHD9	99	81.072	ENSMGAG00000004642	CHD9	72	80.744	Meleagris_gallopavo
ENSHGLG00000014938	CHD9	100	95.767	ENSMAUG00000011087	-	100	95.767	Mesocricetus_auratus
ENSHGLG00000014938	CHD9	99	98.035	ENSMICG00000016679	CHD9	100	98.168	Microcebus_murinus
ENSHGLG00000014938	CHD9	100	96.110	ENSMOCG00000018583	-	100	96.110	Microtus_ochrogaster
ENSHGLG00000014938	CHD9	94	80.723	ENSMMOG00000016406	chd9	74	63.032	Mola_mola
ENSHGLG00000014938	CHD9	67	96.246	ENSMODG00000013142	-	99	92.308	Monodelphis_domestica
ENSHGLG00000014938	CHD9	95	81.655	ENSMALG00000013306	chd9	97	61.581	Monopterus_albus
ENSHGLG00000014938	CHD9	99	95.029	MGP_CAROLIEiJ_G0031364	Chd9	99	90.770	Mus_caroli
ENSHGLG00000014938	CHD9	100	95.080	ENSMUSG00000056608	Chd9	100	95.080	Mus_musculus
ENSHGLG00000014938	CHD9	99	94.566	MGP_PahariEiJ_G0022964	Chd9	99	88.761	Mus_pahari
ENSHGLG00000014938	CHD9	99	94.913	MGP_SPRETEiJ_G0032483	Chd9	99	90.275	Mus_spretus
ENSHGLG00000014938	CHD9	99	97.457	ENSMPUG00000003285	CHD9	100	94.280	Mustela_putorius_furo
ENSHGLG00000014938	CHD9	99	96.416	ENSMLUG00000004456	CHD9	100	93.244	Myotis_lucifugus
ENSHGLG00000014938	CHD9	100	95.995	ENSNGAG00000019957	-	100	95.995	Nannospalax_galili
ENSHGLG00000014938	CHD9	96	80.737	ENSNBRG00000009423	chd9	97	68.922	Neolamprologus_brichardi
ENSHGLG00000014938	CHD9	99	97.919	ENSNLEG00000001026	CHD9	100	95.211	Nomascus_leucogenys
ENSHGLG00000014938	CHD9	83	95.082	ENSMEUG00000008222	-	84	96.732	Notamacropus_eugenii
ENSHGLG00000014938	CHD9	85	97.143	ENSOPRG00000011168	CHD9	85	97.143	Ochotona_princeps
ENSHGLG00000014938	CHD9	99	98.382	ENSODEG00000004466	CHD9	100	96.346	Octodon_degus
ENSHGLG00000014938	CHD9	96	80.737	ENSONIG00000002816	chd9	99	70.250	Oreochromis_niloticus
ENSHGLG00000014938	CHD9	99	92.849	ENSOANG00000013401	CHD9	100	86.034	Ornithorhynchus_anatinus
ENSHGLG00000014938	CHD9	100	97.826	ENSOCUG00000001016	CHD9	99	95.944	Oryctolagus_cuniculus
ENSHGLG00000014938	CHD9	96	80.476	ENSORLG00000013810	chd9	99	59.786	Oryzias_latipes
ENSHGLG00000014938	CHD9	95	78.998	ENSORLG00020020665	chd9	99	60.215	Oryzias_latipes_hni
ENSHGLG00000014938	CHD9	96	80.476	ENSORLG00015019126	chd9	95	68.988	Oryzias_latipes_hsok
ENSHGLG00000014938	CHD9	95	78.998	ENSOMEG00000015978	chd9	99	62.285	Oryzias_melastigma
ENSHGLG00000014938	CHD9	99	97.688	ENSOGAG00000002110	CHD9	100	93.868	Otolemur_garnettii
ENSHGLG00000014938	CHD9	99	97.572	ENSOARG00000017664	CHD9	100	93.978	Ovis_aries
ENSHGLG00000014938	CHD9	98	95.460	ENSPPAG00000039388	-	100	93.983	Pan_paniscus
ENSHGLG00000014938	CHD9	99	97.110	ENSPPRG00000004801	CHD9	100	98.535	Panthera_pardus
ENSHGLG00000014938	CHD9	99	96.994	ENSPTIG00000021854	CHD9	100	93.522	Panthera_tigris_altaica
ENSHGLG00000014938	CHD9	99	97.919	ENSPTRG00000008113	CHD9	100	98.535	Pan_troglodytes
ENSHGLG00000014938	CHD9	100	98.169	ENSPANG00000019307	CHD9	100	98.168	Papio_anubis
ENSHGLG00000014938	CHD9	99	81.272	ENSPKIG00000021876	chd9	68	76.615	Paramormyrops_kingsleyae
ENSHGLG00000014938	CHD9	96	77.672	ENSPKIG00000025401	-	71	63.143	Paramormyrops_kingsleyae
ENSHGLG00000014938	CHD9	99	88.825	ENSPSIG00000008099	CHD9	99	84.703	Pelodiscus_sinensis
ENSHGLG00000014938	CHD9	53	77.039	ENSPMAG00000006035	-	72	67.607	Petromyzon_marinus
ENSHGLG00000014938	CHD9	100	93.721	ENSPCIG00000017215	CHD9	97	89.681	Phascolarctos_cinereus
ENSHGLG00000014938	CHD9	96	80.262	ENSPFOG00000015839	chd9	91	66.265	Poecilia_formosa
ENSHGLG00000014938	CHD9	96	80.262	ENSPLAG00000011118	chd9	97	69.052	Poecilia_latipinna
ENSHGLG00000014938	CHD9	96	78.835	ENSPMEG00000015106	chd9	88	66.601	Poecilia_mexicana
ENSHGLG00000014938	CHD9	96	80.262	ENSPREG00000006473	chd9	94	69.314	Poecilia_reticulata
ENSHGLG00000014938	CHD9	99	98.035	ENSPPYG00000007348	CHD9	100	94.866	Pongo_abelii
ENSHGLG00000014938	CHD9	99	94.907	ENSPCAG00000007564	CHD9	86	95.772	Procavia_capensis
ENSHGLG00000014938	CHD9	99	97.919	ENSPCOG00000028433	CHD9	100	99.267	Propithecus_coquereli
ENSHGLG00000014938	CHD9	97	90.673	ENSPVAG00000015617	CHD9	98	90.452	Pteropus_vampyrus
ENSHGLG00000014938	CHD9	96	80.737	ENSPNYG00000010947	chd9	66	75.552	Pundamilia_nyererei
ENSHGLG00000014938	CHD9	99	77.753	ENSPNAG00000024141	chd9	99	68.119	Pygocentrus_nattereri
ENSHGLG00000014938	CHD9	99	93.642	ENSRNOG00000049302	Chd9	100	90.667	Rattus_norvegicus
ENSHGLG00000014938	CHD9	99	98.032	ENSRBIG00000035553	CHD9	100	98.168	Rhinopithecus_bieti
ENSHGLG00000014938	CHD9	96	97.979	ENSRROG00000033278	CHD9	100	98.168	Rhinopithecus_roxellana
ENSHGLG00000014938	CHD9	99	98.035	ENSSBOG00000030240	CHD9	100	97.436	Saimiri_boliviensis_boliviensis
ENSHGLG00000014938	CHD9	99	93.310	ENSSHAG00000002719	CHD9	100	86.967	Sarcophilus_harrisii
ENSHGLG00000014938	CHD9	99	77.753	ENSSFOG00015001327	chd9	67	76.083	Scleropages_formosus
ENSHGLG00000014938	CHD9	99	80.694	ENSSFOG00015020209	chd9	68	77.049	Scleropages_formosus
ENSHGLG00000014938	CHD9	96	79.667	ENSSMAG00000008953	chd9	97	67.689	Scophthalmus_maximus
ENSHGLG00000014938	CHD9	99	77.580	ENSSDUG00000006139	chd9	95	69.552	Seriola_dumerili
ENSHGLG00000014938	CHD9	99	77.567	ENSSLDG00000017818	chd9	95	69.868	Seriola_lalandi_dorsalis
ENSHGLG00000014938	CHD9	90	99.743	ENSSARG00000010632	CHD9	71	97.601	Sorex_araneus
ENSHGLG00000014938	CHD9	96	80.856	ENSSPAG00000021649	chd9	98	68.140	Stegastes_partitus
ENSHGLG00000014938	CHD9	99	97.110	ENSSSCG00000033591	CHD9	75	95.459	Sus_scrofa
ENSHGLG00000014938	CHD9	99	91.619	ENSTGUG00000007476	CHD9	100	84.933	Taeniopygia_guttata
ENSHGLG00000014938	CHD9	95	81.055	ENSTRUG00000009125	chd9	73	62.415	Takifugu_rubripes
ENSHGLG00000014938	CHD9	68	94.737	ENSTNIG00000003825	chd9	87	81.951	Tetraodon_nigroviridis
ENSHGLG00000014938	CHD9	92	83.562	ENSTBEG00000016052	-	81	94.595	Tupaia_belangeri
ENSHGLG00000014938	CHD9	99	97.572	ENSTTRG00000012674	CHD9	90	94.061	Tursiops_truncatus
ENSHGLG00000014938	CHD9	64	92.126	ENSUAMG00000022706	CHD9	100	99.267	Ursus_americanus
ENSHGLG00000014938	CHD9	99	97.225	ENSUMAG00000004043	CHD9	99	98.294	Ursus_maritimus
ENSHGLG00000014938	CHD9	97	93.634	ENSVPAG00000001374	CHD9	97	93.598	Vicugna_pacos
ENSHGLG00000014938	CHD9	99	97.341	ENSVVUG00000019435	CHD9	100	94.867	Vulpes_vulpes
ENSHGLG00000014938	CHD9	99	86.076	ENSXETG00000000349	chd9	96	76.301	Xenopus_tropicalis
ENSHGLG00000014938	CHD9	96	80.143	ENSXCOG00000012997	chd9	97	69.269	Xiphophorus_couchianus
ENSHGLG00000014938	CHD9	96	80.143	ENSXMAG00000016192	chd9	98	69.588	Xiphophorus_maculatus