EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000015077 (Gene tree)
Gene ID: -
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 14323 bases
Position: chrJH602054.1:23854023-23868345
Accession: 101708030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000021103	RRM_1	PF00076.22	4.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000021307	-	90	-	ENSHGLP00000021104	29 (aa)	-	UPI00021CF755
ENSHGLT00000021306	-	2004	XM_004840928	ENSHGLP00000021103	238 (aa)	XP_004840985	A0A0P6JD06

Gene Model

Click here to download ENSHGLG00000015077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000015077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000015077	RBM38	53	30.159	ENSHGLG00000006125	-	77	30.159
ENSHGLG00000015077	RBM38	62	78.947	ENSHGLG00000008335	RBM24	100	67.227
ENSHGLG00000015077	RBM38	53	32.540	ENSHGLG00000012444	MSI2	88	32.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000015077	RBM38	100	92.050	ENSG00000132819	RBM38	100	97.521	Homo_sapiens
ENSHGLG00000015077	RBM38	90	59.072	ENSAPOG00000003301	rbm38	93	59.072	Acanthochromis_polyacanthus
ENSHGLG00000015077	RBM38	91	67.568	ENSAPOG00000009939	-	94	65.611	Acanthochromis_polyacanthus
ENSHGLG00000015077	RBM38	89	69.406	ENSACIG00000012502	-	100	88.034	Amphilophus_citrinellus
ENSHGLG00000015077	RBM38	89	56.652	ENSACIG00000000010	rbm38	91	56.652	Amphilophus_citrinellus
ENSHGLG00000015077	RBM38	99	61.317	ENSAOCG00000012559	RBM38	99	59.259	Amphiprion_ocellaris
ENSHGLG00000015077	RBM38	90	59.072	ENSAOCG00000013497	-	93	59.072	Amphiprion_ocellaris
ENSHGLG00000015077	RBM38	91	62.343	ENSAPEG00000023581	-	95	60.759	Amphiprion_percula
ENSHGLG00000015077	RBM38	99	59.836	ENSAPEG00000013137	rbm38	99	59.836	Amphiprion_percula
ENSHGLG00000015077	RBM38	89	64.255	ENSATEG00000016710	-	92	62.338	Anabas_testudineus
ENSHGLG00000015077	RBM38	90	61.947	ENSATEG00000016366	rbm38	94	61.947	Anabas_testudineus
ENSHGLG00000015077	RBM38	91	78.995	ENSACAG00000016238	RBM38	98	72.385	Anolis_carolinensis
ENSHGLG00000015077	RBM38	90	92.130	ENSANAG00000031959	RBM38	100	98.347	Aotus_nancymaae
ENSHGLG00000015077	RBM38	89	65.368	ENSACLG00000019514	-	92	63.203	Astatotilapia_calliptera
ENSHGLG00000015077	RBM38	91	66.522	ENSAMXG00000015601	-	95	65.217	Astyanax_mexicanus
ENSHGLG00000015077	RBM38	77	63.784	ENSAMXG00000038120	rbm38	68	66.667	Astyanax_mexicanus
ENSHGLG00000015077	RBM38	100	90.795	ENSBTAG00000008105	RBM38	100	90.795	Bos_taurus
ENSHGLG00000015077	RBM38	100	92.050	ENSCJAG00000019139	RBM38	100	98.347	Callithrix_jacchus
ENSHGLG00000015077	RBM38	100	92.050	ENSCAFG00020021943	RBM38	100	92.050	Canis_lupus_dingo
ENSHGLG00000015077	RBM38	100	90.377	ENSCHIG00000002609	RBM38	100	90.377	Capra_hircus
ENSHGLG00000015077	RBM38	100	94.979	ENSCPOG00000012781	RBM38	100	94.979	Cavia_porcellus
ENSHGLG00000015077	RBM38	100	92.050	ENSCCAG00000036872	RBM38	100	98.347	Cebus_capucinus
ENSHGLG00000015077	RBM38	100	92.050	ENSCATG00000032133	RBM38	100	98.347	Cercocebus_atys
ENSHGLG00000015077	RBM38	96	94.348	ENSCLAG00000005906	RBM38	100	94.348	Chinchilla_lanigera
ENSHGLG00000015077	RBM38	100	92.050	ENSCSAG00000015503	RBM38	100	92.050	Chlorocebus_sabaeus
ENSHGLG00000015077	RBM38	90	80.184	ENSCPBG00000024059	RBM38	100	76.959	Chrysemys_picta_bellii
ENSHGLG00000015077	RBM38	63	62.420	ENSCING00000025102	-	68	62.420	Ciona_intestinalis
ENSHGLG00000015077	RBM38	68	60.736	ENSCSAVG00000001132	-	50	60.736	Ciona_savignyi
ENSHGLG00000015077	RBM38	99	71.008	ENSCANG00000030105	-	89	71.008	Colobus_angolensis_palliatus
ENSHGLG00000015077	RBM38	100	90.377	ENSCGRG00001012928	Rbm38	100	90.377	Cricetulus_griseus_chok1gshd
ENSHGLG00000015077	RBM38	62	68.667	ENSCSEG00000020943	rbm38	55	66.061	Cynoglossus_semilaevis
ENSHGLG00000015077	RBM38	89	69.406	ENSCSEG00000004701	-	93	67.580	Cynoglossus_semilaevis
ENSHGLG00000015077	RBM38	89	59.657	ENSCVAG00000015952	rbm38	91	60.515	Cyprinodon_variegatus
ENSHGLG00000015077	RBM38	89	66.953	ENSCVAG00000005472	-	92	64.530	Cyprinodon_variegatus
ENSHGLG00000015077	RBM38	88	64.126	ENSDARG00000058818	rbm38	92	61.883	Danio_rerio
ENSHGLG00000015077	RBM38	90	86.574	ENSDNOG00000032004	RBM38	100	83.333	Dasypus_novemcinctus
ENSHGLG00000015077	RBM38	100	90.377	ENSECAG00000007700	RBM38	100	90.377	Equus_caballus
ENSHGLG00000015077	RBM38	100	88.333	ENSEEUG00000013489	RBM38	100	87.500	Erinaceus_europaeus
ENSHGLG00000015077	RBM38	84	65.174	ENSELUG00000000585	-	66	77.703	Esox_lucius
ENSHGLG00000015077	RBM38	90	65.823	ENSELUG00000005849	-	95	63.713	Esox_lucius
ENSHGLG00000015077	RBM38	100	91.213	ENSFCAG00000042916	RBM38	100	96.694	Felis_catus
ENSHGLG00000015077	RBM38	74	84.091	ENSFALG00000010805	RBM38	89	83.041	Ficedula_albicollis
ENSHGLG00000015077	RBM38	89	71.759	ENSFHEG00000006160	-	92	68.837	Fundulus_heteroclitus
ENSHGLG00000015077	RBM38	89	57.511	ENSFHEG00000017748	rbm38	91	57.511	Fundulus_heteroclitus
ENSHGLG00000015077	RBM38	75	70.718	ENSGMOG00000016655	-	87	75.460	Gadus_morhua
ENSHGLG00000015077	RBM38	90	78.802	ENSGALG00000026081	RBM38	100	75.115	Gallus_gallus
ENSHGLG00000015077	RBM38	90	67.411	ENSGACG00000009873	-	100	64.286	Gasterosteus_aculeatus
ENSHGLG00000015077	RBM38	89	64.151	ENSGACG00000015224	rbm38	98	64.319	Gasterosteus_aculeatus
ENSHGLG00000015077	RBM38	90	80.645	ENSGAGG00000001187	RBM38	100	77.419	Gopherus_agassizii
ENSHGLG00000015077	RBM38	89	69.725	ENSHBUG00000011778	-	92	67.431	Haplochromis_burtoni
ENSHGLG00000015077	RBM38	90	61.883	ENSHBUG00000012058	rbm38	92	61.883	Haplochromis_burtoni
ENSHGLG00000015077	RBM38	79	70.833	ENSHCOG00000005622	-	54	69.110	Hippocampus_comes
ENSHGLG00000015077	RBM38	77	60.109	ENSHCOG00000019040	rbm38	70	63.473	Hippocampus_comes
ENSHGLG00000015077	RBM38	91	65.517	ENSIPUG00000019349	-	95	63.362	Ictalurus_punctatus
ENSHGLG00000015077	RBM38	88	54.661	ENSKMAG00000012402	rbm38	99	54.008	Kryptolebias_marmoratus
ENSHGLG00000015077	RBM38	89	58.798	ENSLBEG00000018878	rbm38	91	58.798	Labrus_bergylta
ENSHGLG00000015077	RBM38	89	68.349	ENSLBEG00000016163	RBM38	92	66.514	Labrus_bergylta
ENSHGLG00000015077	RBM38	91	70.982	ENSLOCG00000003456	rbm38	95	68.750	Lepisosteus_oculatus
ENSHGLG00000015077	RBM38	98	91.915	ENSMFAG00000043808	RBM38	97	98.291	Macaca_fascicularis
ENSHGLG00000015077	RBM38	100	92.050	ENSMMUG00000031391	RBM38	100	98.347	Macaca_mulatta
ENSHGLG00000015077	RBM38	100	92.050	ENSMNEG00000034683	RBM38	100	98.347	Macaca_nemestrina
ENSHGLG00000015077	RBM38	89	59.227	ENSMAMG00000024135	rbm38	91	59.227	Mastacembelus_armatus
ENSHGLG00000015077	RBM38	91	62.869	ENSMAMG00000020499	RBM38	95	60.851	Mastacembelus_armatus
ENSHGLG00000015077	RBM38	90	57.143	ENSMZEG00005026036	rbm38	93	57.143	Maylandia_zebra
ENSHGLG00000015077	RBM38	89	69.725	ENSMZEG00005000849	-	92	67.431	Maylandia_zebra
ENSHGLG00000015077	RBM38	100	91.632	ENSMAUG00000021211	Rbm38	100	91.632	Mesocricetus_auratus
ENSHGLG00000015077	RBM38	90	93.519	ENSMICG00000038011	RBM38	100	93.519	Microcebus_murinus
ENSHGLG00000015077	RBM38	100	90.795	ENSMOCG00000008715	Rbm38	100	90.795	Microtus_ochrogaster
ENSHGLG00000015077	RBM38	99	64.854	ENSMMOG00000020051	-	99	62.762	Mola_mola
ENSHGLG00000015077	RBM38	100	77.500	ENSMODG00000016458	RBM38	100	75.000	Monodelphis_domestica
ENSHGLG00000015077	RBM38	63	70.323	ENSMALG00000022327	rbm38	67	70.323	Monopterus_albus
ENSHGLG00000015077	RBM38	77	73.016	ENSMALG00000004680	RBM38	70	69.681	Monopterus_albus
ENSHGLG00000015077	RBM38	100	92.050	MGP_CAROLIEiJ_G0024745	Rbm38	100	92.050	Mus_caroli
ENSHGLG00000015077	RBM38	100	91.632	ENSMUSG00000027510	Rbm38	100	91.632	Mus_musculus
ENSHGLG00000015077	RBM38	100	91.213	MGP_PahariEiJ_G0026186	Rbm38	100	91.213	Mus_pahari
ENSHGLG00000015077	RBM38	100	91.213	MGP_SPRETEiJ_G0025665	Rbm38	100	91.213	Mus_spretus
ENSHGLG00000015077	RBM38	77	92.973	ENSMPUG00000006518	RBM38	93	93.048	Mustela_putorius_furo
ENSHGLG00000015077	RBM38	90	88.426	ENSMLUG00000011140	RBM38	100	88.426	Myotis_lucifugus
ENSHGLG00000015077	RBM38	90	61.161	ENSNBRG00000022685	rbm38	91	61.161	Neolamprologus_brichardi
ENSHGLG00000015077	RBM38	89	65.948	ENSNBRG00000022545	-	92	63.793	Neolamprologus_brichardi
ENSHGLG00000015077	RBM38	58	79.710	ENSMEUG00000005475	-	100	79.710	Notamacropus_eugenii
ENSHGLG00000015077	RBM38	100	94.142	ENSODEG00000007980	RBM38	100	94.142	Octodon_degus
ENSHGLG00000015077	RBM38	88	65.801	ENSONIG00000020324	-	92	63.636	Oreochromis_niloticus
ENSHGLG00000015077	RBM38	90	57.384	ENSONIG00000017073	rbm38	95	57.384	Oreochromis_niloticus
ENSHGLG00000015077	RBM38	97	77.056	ENSOANG00000009259	RBM38	88	74.026	Ornithorhynchus_anatinus
ENSHGLG00000015077	RBM38	89	56.410	ENSORLG00000012154	rbm38	93	55.230	Oryzias_latipes
ENSHGLG00000015077	RBM38	89	63.519	ENSORLG00000027180	-	92	62.500	Oryzias_latipes
ENSHGLG00000015077	RBM38	90	55.230	ENSORLG00020017871	rbm38	93	55.230	Oryzias_latipes_hni
ENSHGLG00000015077	RBM38	89	63.519	ENSORLG00020020751	-	95	60.324	Oryzias_latipes_hni
ENSHGLG00000015077	RBM38	89	63.793	ENSORLG00015017040	-	92	63.362	Oryzias_latipes_hsok
ENSHGLG00000015077	RBM38	97	56.780	ENSORLG00015012606	rbm38	97	57.627	Oryzias_latipes_hsok
ENSHGLG00000015077	RBM38	89	62.821	ENSOMEG00000023912	-	92	61.739	Oryzias_melastigma
ENSHGLG00000015077	RBM38	90	56.067	ENSOMEG00000006805	rbm38	79	61.881	Oryzias_melastigma
ENSHGLG00000015077	RBM38	100	92.500	ENSOGAG00000029136	RBM38	100	92.500	Otolemur_garnettii
ENSHGLG00000015077	RBM38	100	91.213	ENSPPRG00000009507	RBM38	100	96.694	Panthera_pardus
ENSHGLG00000015077	RBM38	87	88.942	ENSPTRG00000013661	RBM38	100	97.521	Pan_troglodytes
ENSHGLG00000015077	RBM38	52	98.387	ENSPTRG00000045845	-	68	98.387	Pan_troglodytes
ENSHGLG00000015077	RBM38	100	92.050	ENSPANG00000020919	-	100	98.347	Papio_anubis
ENSHGLG00000015077	RBM38	99	70.168	ENSPANG00000033127	-	100	70.168	Papio_anubis
ENSHGLG00000015077	RBM38	94	63.374	ENSPKIG00000025417	rbm38	98	61.317	Paramormyrops_kingsleyae
ENSHGLG00000015077	RBM38	91	68.142	ENSPKIG00000018122	-	100	88.889	Paramormyrops_kingsleyae
ENSHGLG00000015077	RBM38	93	79.372	ENSPSIG00000011649	RBM38	95	76.233	Pelodiscus_sinensis
ENSHGLG00000015077	RBM38	89	60.944	ENSPMGG00000017094	-	92	59.227	Periophthalmus_magnuspinnatus
ENSHGLG00000015077	RBM38	90	56.303	ENSPMGG00000011343	rbm38	94	57.872	Periophthalmus_magnuspinnatus
ENSHGLG00000015077	RBM38	100	78.333	ENSPCIG00000013648	RBM38	100	75.833	Phascolarctos_cinereus
ENSHGLG00000015077	RBM38	89	57.265	ENSPFOG00000011658	rbm38	91	59.402	Poecilia_formosa
ENSHGLG00000015077	RBM38	89	66.807	ENSPLAG00000002500	-	92	65.385	Poecilia_latipinna
ENSHGLG00000015077	RBM38	89	56.838	ENSPLAG00000005218	rbm38	91	59.402	Poecilia_latipinna
ENSHGLG00000015077	RBM38	89	57.265	ENSPMEG00000015770	rbm38	91	59.402	Poecilia_mexicana
ENSHGLG00000015077	RBM38	89	57.692	ENSPREG00000007398	rbm38	91	59.829	Poecilia_reticulata
ENSHGLG00000015077	RBM38	100	92.083	ENSPCOG00000026201	RBM38	100	97.541	Propithecus_coquereli
ENSHGLG00000015077	RBM38	100	64.435	ENSPVAG00000006457	RBM38	100	64.435	Pteropus_vampyrus
ENSHGLG00000015077	RBM38	89	69.725	ENSPNYG00000019727	-	100	88.889	Pundamilia_nyererei
ENSHGLG00000015077	RBM38	89	61.111	ENSPNYG00000021373	rbm38	92	58.772	Pundamilia_nyererei
ENSHGLG00000015077	RBM38	84	66.667	ENSPNAG00000010596	rbm38	88	64.319	Pygocentrus_nattereri
ENSHGLG00000015077	RBM38	91	66.957	ENSPNAG00000015123	-	88	88.496	Pygocentrus_nattereri
ENSHGLG00000015077	RBM38	100	90.795	ENSRNOG00000006420	Rbm38	100	90.795	Rattus_norvegicus
ENSHGLG00000015077	RBM38	100	75.314	ENSRROG00000036388	-	100	75.314	Rhinopithecus_roxellana
ENSHGLG00000015077	RBM38	90	91.667	ENSSBOG00000031053	RBM38	100	99.065	Saimiri_boliviensis_boliviensis
ENSHGLG00000015077	RBM38	89	65.455	ENSSFOG00015004453	rbm38	92	67.273	Scleropages_formosus
ENSHGLG00000015077	RBM38	89	59.657	ENSSDUG00000022611	rbm38	91	59.657	Seriola_dumerili
ENSHGLG00000015077	RBM38	89	65.236	ENSSDUG00000021082	RBM38	92	62.931	Seriola_dumerili
ENSHGLG00000015077	RBM38	89	65.236	ENSSLDG00000011778	RBM38	92	62.931	Seriola_lalandi_dorsalis
ENSHGLG00000015077	RBM38	89	63.426	ENSSLDG00000010845	rbm38	90	63.426	Seriola_lalandi_dorsalis
ENSHGLG00000015077	RBM38	89	66.197	ENSSPAG00000020989	RBM38	91	65.421	Stegastes_partitus
ENSHGLG00000015077	RBM38	90	58.824	ENSSPAG00000011113	rbm38	93	58.824	Stegastes_partitus
ENSHGLG00000015077	RBM38	100	91.632	ENSSSCG00000007504	RBM38	100	91.632	Sus_scrofa
ENSHGLG00000015077	RBM38	89	65.948	ENSTRUG00000019869	-	92	64.655	Takifugu_rubripes
ENSHGLG00000015077	RBM38	75	63.934	ENSTRUG00000024954	rbm38	91	56.332	Takifugu_rubripes
ENSHGLG00000015077	RBM38	89	68.326	ENSTNIG00000007093	-	97	66.516	Tetraodon_nigroviridis
ENSHGLG00000015077	RBM38	50	89.076	ENSTBEG00000001689	-	50	89.076	Tupaia_belangeri
ENSHGLG00000015077	RBM38	100	91.632	ENSUAMG00000019780	RBM38	100	91.632	Ursus_americanus
ENSHGLG00000015077	RBM38	100	92.050	ENSVVUG00000017246	RBM38	100	92.050	Vulpes_vulpes
ENSHGLG00000015077	RBM38	92	72.768	ENSXETG00000011268	rbm38	100	70.982	Xenopus_tropicalis
ENSHGLG00000015077	RBM38	65	70.440	ENSXCOG00000017324	-	64	70.440	Xiphophorus_couchianus
ENSHGLG00000015077	RBM38	89	58.369	ENSXMAG00000023662	rbm38	91	59.657	Xiphophorus_maculatus