EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000015191 (Gene tree)
Gene ID: -
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 15368 bases
Position: chrJH602073.1:21805035-21820402
Accession: 101704811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000021263	PRP4	PF08799.11	4.6e-14	1	1
ENSHGLP00000021262	PRP4	PF08799.11	4.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000021468	-	2491	XM_004849540	ENSHGLP00000021262	521 (aa)	XP_004849597	A0A0P6JTT2
ENSHGLT00000021469	-	1518	-	ENSHGLP00000021263	505 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000015191's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000015191's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000015191	PRPF4	56	30.000	ENSHGLG00000013436	POC1A	81	30.000
ENSHGLG00000015191	PRPF4	55	32.203	ENSHGLG00000014556	POC1B	63	32.203
ENSHGLG00000015191	PRPF4	100	82.218	ENSHGLG00000016628	-	100	82.983
ENSHGLG00000015191	PRPF4	56	34.694	ENSHGLG00000002431	TBL3	71	34.694
ENSHGLG00000015191	PRPF4	100	80.998	ENSHGLG00000003838	-	100	80.998

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000015191	PRPF4	100	98.848	ENSG00000136875	PRPF4	100	98.848	Homo_sapiens
ENSHGLG00000015191	PRPF4	96	77.615	ENSAPOG00000014132	prpf4	98	77.615	Acanthochromis_polyacanthus
ENSHGLG00000015191	PRPF4	100	99.040	ENSAMEG00000013048	PRPF4	98	99.040	Ailuropoda_melanoleuca
ENSHGLG00000015191	PRPF4	96	76.984	ENSACIG00000005579	prpf4	99	76.984	Amphilophus_citrinellus
ENSHGLG00000015191	PRPF4	96	77.030	ENSAOCG00000005457	prpf4	99	77.030	Amphiprion_ocellaris
ENSHGLG00000015191	PRPF4	96	76.832	ENSAPEG00000000776	prpf4	99	76.832	Amphiprion_percula
ENSHGLG00000015191	PRPF4	96	76.786	ENSATEG00000023013	prpf4	99	76.786	Anabas_testudineus
ENSHGLG00000015191	PRPF4	100	89.060	ENSAPLG00000006534	PRPF4	97	89.060	Anas_platyrhynchos
ENSHGLG00000015191	PRPF4	100	89.675	ENSACAG00000015110	PRPF4	100	89.675	Anolis_carolinensis
ENSHGLG00000015191	PRPF4	100	99.232	ENSANAG00000022464	PRPF4	96	99.232	Aotus_nancymaae
ENSHGLG00000015191	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSHGLG00000015191	PRPF4	97	70.423	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSHGLG00000015191	PRPF4	100	98.273	ENSBTAG00000004571	PRPF4	100	98.273	Bos_taurus
ENSHGLG00000015191	PRPF4	90	44.000	WBGene00007972	prp-4	96	43.908	Caenorhabditis_elegans
ENSHGLG00000015191	PRPF4	100	99.042	ENSCJAG00000017856	PRPF4	100	99.042	Callithrix_jacchus
ENSHGLG00000015191	PRPF4	100	99.040	ENSCAFG00000003224	PRPF4	97	99.040	Canis_familiaris
ENSHGLG00000015191	PRPF4	100	99.040	ENSCAFG00020022637	PRPF4	100	99.040	Canis_lupus_dingo
ENSHGLG00000015191	PRPF4	100	98.851	ENSCHIG00000024648	-	100	98.851	Capra_hircus
ENSHGLG00000015191	PRPF4	100	99.040	ENSTSYG00000010366	PRPF4	100	99.040	Carlito_syrichta
ENSHGLG00000015191	PRPF4	88	88.783	ENSCAPG00000008935	PRPF4	97	88.783	Cavia_aperea
ENSHGLG00000015191	PRPF4	100	99.232	ENSCPOG00000010747	-	100	99.232	Cavia_porcellus
ENSHGLG00000015191	PRPF4	100	92.706	ENSCPOG00000014729	-	100	92.706	Cavia_porcellus
ENSHGLG00000015191	PRPF4	100	99.040	ENSCCAG00000028990	PRPF4	100	99.040	Cebus_capucinus
ENSHGLG00000015191	PRPF4	100	98.848	ENSCATG00000021552	PRPF4	100	98.848	Cercocebus_atys
ENSHGLG00000015191	PRPF4	100	99.424	ENSCLAG00000013448	PRPF4	100	99.424	Chinchilla_lanigera
ENSHGLG00000015191	PRPF4	87	95.354	ENSCHOG00000007233	PRPF4	100	95.354	Choloepus_hoffmanni
ENSHGLG00000015191	PRPF4	99	90.680	ENSCPBG00000019136	PRPF4	74	90.680	Chrysemys_picta_bellii
ENSHGLG00000015191	PRPF4	96	58.858	ENSCING00000001299	-	97	58.218	Ciona_intestinalis
ENSHGLG00000015191	PRPF4	96	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSHGLG00000015191	PRPF4	100	99.040	ENSCANG00000003246	PRPF4	100	99.040	Colobus_angolensis_palliatus
ENSHGLG00000015191	PRPF4	100	98.848	ENSCGRG00001016992	Prpf4	100	98.848	Cricetulus_griseus_chok1gshd
ENSHGLG00000015191	PRPF4	100	98.848	ENSCGRG00000017560	Prpf4	100	98.848	Cricetulus_griseus_crigri
ENSHGLG00000015191	PRPF4	97	75.446	ENSCSEG00000020451	prpf4	99	75.446	Cynoglossus_semilaevis
ENSHGLG00000015191	PRPF4	97	79.406	ENSDARG00000067639	prpf4	99	79.406	Danio_rerio
ENSHGLG00000015191	PRPF4	100	98.467	ENSDNOG00000013203	PRPF4	100	98.467	Dasypus_novemcinctus
ENSHGLG00000015191	PRPF4	100	98.848	ENSDORG00000026275	Prpf4	100	98.848	Dipodomys_ordii
ENSHGLG00000015191	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSHGLG00000015191	PRPF4	100	97.132	ENSETEG00000020389	PRPF4	100	97.132	Echinops_telfairi
ENSHGLG00000015191	PRPF4	95	72.811	ENSEBUG00000015229	prpf4	86	73.272	Eptatretus_burgeri
ENSHGLG00000015191	PRPF4	100	99.232	ENSEASG00005022678	PRPF4	100	99.232	Equus_asinus_asinus
ENSHGLG00000015191	PRPF4	100	99.344	ENSECAG00000007072	PRPF4	100	99.232	Equus_caballus
ENSHGLG00000015191	PRPF4	100	78.384	ENSEEUG00000007480	PRPF4	100	78.384	Erinaceus_europaeus
ENSHGLG00000015191	PRPF4	97	80.594	ENSELUG00000007510	prpf4	99	80.594	Esox_lucius
ENSHGLG00000015191	PRPF4	100	99.042	ENSFCAG00000005514	PRPF4	100	99.042	Felis_catus
ENSHGLG00000015191	PRPF4	98	88.117	ENSFALG00000005423	PRPF4	90	85.376	Ficedula_albicollis
ENSHGLG00000015191	PRPF4	100	99.232	ENSFDAG00000005839	PRPF4	100	99.232	Fukomys_damarensis
ENSHGLG00000015191	PRPF4	96	75.992	ENSFHEG00000001300	prpf4	99	75.992	Fundulus_heteroclitus
ENSHGLG00000015191	PRPF4	98	90.020	ENSGALG00000008857	PRPF4	96	89.341	Gallus_gallus
ENSHGLG00000015191	PRPF4	67	71.471	ENSGAFG00000012164	prpf4	70	71.471	Gambusia_affinis
ENSHGLG00000015191	PRPF4	96	69.643	ENSGACG00000015476	prpf4	99	68.849	Gasterosteus_aculeatus
ENSHGLG00000015191	PRPF4	99	90.485	ENSGAGG00000025029	PRPF4	95	90.485	Gopherus_agassizii
ENSHGLG00000015191	PRPF4	100	98.848	ENSGGOG00000006943	PRPF4	100	98.848	Gorilla_gorilla
ENSHGLG00000015191	PRPF4	96	76.984	ENSHBUG00000000562	prpf4	99	76.984	Haplochromis_burtoni
ENSHGLG00000015191	PRPF4	100	80.998	ENSHGLG00100005571	-	100	80.998	Heterocephalus_glaber_male
ENSHGLG00000015191	PRPF4	97	79.208	ENSIPUG00000017956	PRPF4	99	79.208	Ictalurus_punctatus
ENSHGLG00000015191	PRPF4	100	98.656	ENSSTOG00000027833	PRPF4	100	98.656	Ictidomys_tridecemlineatus
ENSHGLG00000015191	PRPF4	100	99.232	ENSJJAG00000008838	Prpf4	100	99.232	Jaculus_jaculus
ENSHGLG00000015191	PRPF4	96	75.992	ENSKMAG00000013236	prpf4	99	75.992	Kryptolebias_marmoratus
ENSHGLG00000015191	PRPF4	96	75.697	ENSLBEG00000020611	prpf4	99	75.697	Labrus_bergylta
ENSHGLG00000015191	PRPF4	99	80.154	ENSLACG00000016317	PRPF4	99	80.154	Latimeria_chalumnae
ENSHGLG00000015191	PRPF4	97	81.386	ENSLOCG00000000581	prpf4	99	81.386	Lepisosteus_oculatus
ENSHGLG00000015191	PRPF4	100	98.276	ENSLAFG00000018225	PRPF4	100	98.276	Loxodonta_africana
ENSHGLG00000015191	PRPF4	100	98.656	ENSMFAG00000039397	PRPF4	100	98.656	Macaca_fascicularis
ENSHGLG00000015191	PRPF4	100	98.848	ENSMMUG00000005844	PRPF4	100	98.848	Macaca_mulatta
ENSHGLG00000015191	PRPF4	100	88.484	ENSMNEG00000033737	PRPF4	100	88.484	Macaca_nemestrina
ENSHGLG00000015191	PRPF4	100	98.848	ENSMLEG00000040284	PRPF4	100	98.848	Mandrillus_leucophaeus
ENSHGLG00000015191	PRPF4	97	76.331	ENSMAMG00000020141	prpf4	99	76.331	Mastacembelus_armatus
ENSHGLG00000015191	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSHGLG00000015191	PRPF4	99	88.269	ENSMGAG00000001796	PRPF4	97	88.269	Meleagris_gallopavo
ENSHGLG00000015191	PRPF4	100	98.273	ENSMAUG00000018022	Prpf4	100	98.273	Mesocricetus_auratus
ENSHGLG00000015191	PRPF4	100	98.464	ENSMICG00000015022	PRPF4	100	98.276	Microcebus_murinus
ENSHGLG00000015191	PRPF4	100	98.273	ENSMOCG00000018273	Prpf4	100	98.273	Microtus_ochrogaster
ENSHGLG00000015191	PRPF4	97	74.851	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSHGLG00000015191	PRPF4	100	94.646	ENSMODG00000004444	-	100	94.646	Monodelphis_domestica
ENSHGLG00000015191	PRPF4	100	94.455	ENSMODG00000025096	-	97	94.455	Monodelphis_domestica
ENSHGLG00000015191	PRPF4	96	76.786	ENSMALG00000013624	prpf4	99	76.786	Monopterus_albus
ENSHGLG00000015191	PRPF4	100	98.656	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.656	Mus_caroli
ENSHGLG00000015191	PRPF4	100	98.656	ENSMUSG00000066148	Prpf4	100	98.656	Mus_musculus
ENSHGLG00000015191	PRPF4	100	98.464	MGP_PahariEiJ_G0028413	Prpf4	100	98.464	Mus_pahari
ENSHGLG00000015191	PRPF4	100	98.656	MGP_SPRETEiJ_G0027042	Prpf4	100	98.656	Mus_spretus
ENSHGLG00000015191	PRPF4	100	99.040	ENSMPUG00000007883	PRPF4	100	99.040	Mustela_putorius_furo
ENSHGLG00000015191	PRPF4	100	99.040	ENSMLUG00000015309	-	97	99.040	Myotis_lucifugus
ENSHGLG00000015191	PRPF4	100	97.505	ENSMLUG00000008626	-	97	97.505	Myotis_lucifugus
ENSHGLG00000015191	PRPF4	100	93.474	ENSNGAG00000000468	Prpf4	100	93.474	Nannospalax_galili
ENSHGLG00000015191	PRPF4	96	76.984	ENSNBRG00000007972	prpf4	99	76.984	Neolamprologus_brichardi
ENSHGLG00000015191	PRPF4	100	99.232	ENSNLEG00000016647	PRPF4	100	99.232	Nomascus_leucogenys
ENSHGLG00000015191	PRPF4	99	94.358	ENSMEUG00000013256	PRPF4	100	94.358	Notamacropus_eugenii
ENSHGLG00000015191	PRPF4	100	98.276	ENSOPRG00000005302	PRPF4	100	98.276	Ochotona_princeps
ENSHGLG00000015191	PRPF4	100	99.616	ENSODEG00000018147	PRPF4	100	99.616	Octodon_degus
ENSHGLG00000015191	PRPF4	99	75.479	ENSONIG00000012671	prpf4	99	77.183	Oreochromis_niloticus
ENSHGLG00000015191	PRPF4	100	99.040	ENSOCUG00000005046	PRPF4	100	99.040	Oryctolagus_cuniculus
ENSHGLG00000015191	PRPF4	96	74.701	ENSORLG00000019641	prpf4	99	74.701	Oryzias_latipes
ENSHGLG00000015191	PRPF4	96	74.701	ENSORLG00020019438	prpf4	99	74.701	Oryzias_latipes_hni
ENSHGLG00000015191	PRPF4	96	74.526	ENSOMEG00000020941	prpf4	99	74.526	Oryzias_melastigma
ENSHGLG00000015191	PRPF4	100	94.242	ENSOGAG00000007802	PRPF4	98	94.242	Otolemur_garnettii
ENSHGLG00000015191	PRPF4	100	99.040	ENSOARG00000006319	PRPF4	97	99.040	Ovis_aries
ENSHGLG00000015191	PRPF4	100	98.848	ENSPPAG00000041797	PRPF4	100	98.848	Pan_paniscus
ENSHGLG00000015191	PRPF4	100	99.232	ENSPPRG00000014360	PRPF4	100	99.232	Panthera_pardus
ENSHGLG00000015191	PRPF4	100	99.232	ENSPTIG00000009574	PRPF4	100	99.232	Panthera_tigris_altaica
ENSHGLG00000015191	PRPF4	100	98.848	ENSPTRG00000021274	PRPF4	100	98.659	Pan_troglodytes
ENSHGLG00000015191	PRPF4	100	98.848	ENSPANG00000025776	PRPF4	96	98.848	Papio_anubis
ENSHGLG00000015191	PRPF4	97	80.792	ENSPKIG00000017259	prpf4	99	80.792	Paramormyrops_kingsleyae
ENSHGLG00000015191	PRPF4	100	89.060	ENSPSIG00000010713	PRPF4	91	89.575	Pelodiscus_sinensis
ENSHGLG00000015191	PRPF4	99	58.059	ENSPMGG00000000997	prpf4	99	58.165	Periophthalmus_magnuspinnatus
ENSHGLG00000015191	PRPF4	100	98.848	ENSPEMG00000024115	Prpf4	100	98.848	Peromyscus_maniculatus_bairdii
ENSHGLG00000015191	PRPF4	99	94.358	ENSPCIG00000003821	PRPF4	99	94.358	Phascolarctos_cinereus
ENSHGLG00000015191	PRPF4	96	70.217	ENSPFOG00000013524	prpf4	98	73.292	Poecilia_formosa
ENSHGLG00000015191	PRPF4	82	69.969	ENSPLAG00000011620	prpf4	96	72.360	Poecilia_latipinna
ENSHGLG00000015191	PRPF4	92	74.398	ENSPMEG00000006813	prpf4	98	74.398	Poecilia_mexicana
ENSHGLG00000015191	PRPF4	98	98.635	ENSPCAG00000002561	PRPF4	99	98.635	Procavia_capensis
ENSHGLG00000015191	PRPF4	100	99.040	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSHGLG00000015191	PRPF4	100	95.019	ENSPVAG00000004708	PRPF4	100	95.019	Pteropus_vampyrus
ENSHGLG00000015191	PRPF4	96	77.183	ENSPNYG00000008013	prpf4	99	77.183	Pundamilia_nyererei
ENSHGLG00000015191	PRPF4	97	80.000	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSHGLG00000015191	PRPF4	100	98.848	ENSRNOG00000014777	Prpf4	100	98.848	Rattus_norvegicus
ENSHGLG00000015191	PRPF4	100	99.040	ENSRBIG00000040221	PRPF4	100	99.040	Rhinopithecus_bieti
ENSHGLG00000015191	PRPF4	100	99.040	ENSRROG00000040240	PRPF4	100	99.040	Rhinopithecus_roxellana
ENSHGLG00000015191	PRPF4	100	94.837	ENSSHAG00000017658	PRPF4	100	94.837	Sarcophilus_harrisii
ENSHGLG00000015191	PRPF4	97	81.782	ENSSFOG00015008963	prpf4	99	81.782	Scleropages_formosus
ENSHGLG00000015191	PRPF4	96	75.794	ENSSMAG00000008889	prpf4	99	75.794	Scophthalmus_maximus
ENSHGLG00000015191	PRPF4	96	73.705	ENSSDUG00000022083	prpf4	98	73.904	Seriola_dumerili
ENSHGLG00000015191	PRPF4	96	73.904	ENSSLDG00000008115	prpf4	98	74.104	Seriola_lalandi_dorsalis
ENSHGLG00000015191	PRPF4	100	90.211	ENSSPUG00000015582	PRPF4	100	90.211	Sphenodon_punctatus
ENSHGLG00000015191	PRPF4	96	71.400	ENSSPAG00000011286	prpf4	99	71.400	Stegastes_partitus
ENSHGLG00000015191	PRPF4	100	99.232	ENSSSCG00000024648	PRPF4	100	99.232	Sus_scrofa
ENSHGLG00000015191	PRPF4	95	90.264	ENSTGUG00000002623	PRPF4	100	90.593	Taeniopygia_guttata
ENSHGLG00000015191	PRPF4	97	75.692	ENSTRUG00000008853	prpf4	99	75.692	Takifugu_rubripes
ENSHGLG00000015191	PRPF4	97	74.851	ENSTNIG00000013250	prpf4	99	74.851	Tetraodon_nigroviridis
ENSHGLG00000015191	PRPF4	100	90.613	ENSTBEG00000000821	PRPF4	100	90.613	Tupaia_belangeri
ENSHGLG00000015191	PRPF4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSHGLG00000015191	PRPF4	66	96.707	ENSUAMG00000018288	PRPF4	90	96.707	Ursus_americanus
ENSHGLG00000015191	PRPF4	100	98.273	ENSUMAG00000019375	PRPF4	100	98.273	Ursus_maritimus
ENSHGLG00000015191	PRPF4	100	98.851	ENSVPAG00000005281	PRPF4	100	98.851	Vicugna_pacos
ENSHGLG00000015191	PRPF4	100	97.905	ENSVVUG00000002476	PRPF4	100	97.905	Vulpes_vulpes
ENSHGLG00000015191	PRPF4	77	62.468	ENSXCOG00000006101	prpf4	93	61.795	Xiphophorus_couchianus
ENSHGLG00000015191	PRPF4	96	67.556	ENSXMAG00000002750	prpf4	98	67.556	Xiphophorus_maculatus