EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000015314 (Gene tree)
Gene ID: -
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 38391 bases
Position: chrJH602050.1:31638322-31676712
Accession: 101701564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000021435	TruB_N	PF01509.18	4.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000021644	-	1137	XM_004838868	ENSHGLP00000021435	349 (aa)	XP_004838925	A0A0P6JHH7

Gene Model

Click here to download ENSHGLG00000015314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000015314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000015314	TRUB1	54	34.536	ENSHGLG00000016715	TRUB2	58	34.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000015314	TRUB1	99	86.246	ENSG00000165832	TRUB1	99	86.246	Homo_sapiens
ENSHGLG00000015314	TRUB1	70	66.531	ENSAPOG00000020565	trub1	91	65.339	Acanthochromis_polyacanthus
ENSHGLG00000015314	TRUB1	86	90.429	ENSAMEG00000014931	TRUB1	99	86.895	Ailuropoda_melanoleuca
ENSHGLG00000015314	TRUB1	70	62.195	ENSACIG00000003060	trub1	82	62.195	Amphilophus_citrinellus
ENSHGLG00000015314	TRUB1	70	66.531	ENSAOCG00000017188	trub1	93	64.591	Amphiprion_ocellaris
ENSHGLG00000015314	TRUB1	70	66.667	ENSAPEG00000015209	trub1	89	66.667	Amphiprion_percula
ENSHGLG00000015314	TRUB1	69	67.635	ENSATEG00000023291	trub1	86	67.635	Anabas_testudineus
ENSHGLG00000015314	TRUB1	79	72.727	ENSAPLG00000006808	TRUB1	99	72.727	Anas_platyrhynchos
ENSHGLG00000015314	TRUB1	78	66.790	ENSACAG00000009282	TRUB1	98	66.790	Anolis_carolinensis
ENSHGLG00000015314	TRUB1	96	88.922	ENSANAG00000022870	TRUB1	99	87.679	Aotus_nancymaae
ENSHGLG00000015314	TRUB1	72	65.476	ENSACLG00000000823	trub1	91	65.476	Astatotilapia_calliptera
ENSHGLG00000015314	TRUB1	75	64.368	ENSAMXG00000015845	trub1	87	64.368	Astyanax_mexicanus
ENSHGLG00000015314	TRUB1	98	86.842	ENSBTAG00000012955	TRUB1	100	86.080	Bos_taurus
ENSHGLG00000015314	TRUB1	99	87.143	ENSCJAG00000047815	TRUB1	99	87.143	Callithrix_jacchus
ENSHGLG00000015314	TRUB1	100	86.571	ENSCAFG00000011688	TRUB1	100	86.571	Canis_familiaris
ENSHGLG00000015314	TRUB1	100	86.571	ENSCAFG00020013237	TRUB1	100	86.571	Canis_lupus_dingo
ENSHGLG00000015314	TRUB1	98	86.297	ENSCHIG00000020884	TRUB1	100	86.040	Capra_hircus
ENSHGLG00000015314	TRUB1	99	84.000	ENSTSYG00000000446	TRUB1	99	84.571	Carlito_syrichta
ENSHGLG00000015314	TRUB1	72	84.190	ENSCAPG00000017088	TRUB1	99	84.190	Cavia_aperea
ENSHGLG00000015314	TRUB1	70	88.525	ENSCPOG00000040236	-	100	88.525	Cavia_porcellus
ENSHGLG00000015314	TRUB1	71	80.567	ENSCPOG00000030129	-	86	78.947	Cavia_porcellus
ENSHGLG00000015314	TRUB1	96	88.393	ENSCCAG00000028842	TRUB1	99	86.571	Cebus_capucinus
ENSHGLG00000015314	TRUB1	99	87.106	ENSCATG00000033431	TRUB1	99	87.106	Cercocebus_atys
ENSHGLG00000015314	TRUB1	70	91.393	ENSCLAG00000008664	TRUB1	100	91.393	Chinchilla_lanigera
ENSHGLG00000015314	TRUB1	99	87.106	ENSCSAG00000004891	TRUB1	99	87.106	Chlorocebus_sabaeus
ENSHGLG00000015314	TRUB1	100	75.714	ENSCHOG00000011931	TRUB1	100	75.714	Choloepus_hoffmanni
ENSHGLG00000015314	TRUB1	79	74.818	ENSCPBG00000003051	TRUB1	94	74.818	Chrysemys_picta_bellii
ENSHGLG00000015314	TRUB1	99	87.106	ENSCANG00000029445	TRUB1	99	87.106	Colobus_angolensis_palliatus
ENSHGLG00000015314	TRUB1	81	75.089	ENSCGRG00001010322	-	80	75.084	Cricetulus_griseus_chok1gshd
ENSHGLG00000015314	TRUB1	73	83.137	ENSCGRG00001016772	-	90	75.168	Cricetulus_griseus_chok1gshd
ENSHGLG00000015314	TRUB1	81	84.342	ENSCGRG00000010806	Trub1	91	83.557	Cricetulus_griseus_crigri
ENSHGLG00000015314	TRUB1	73	61.719	ENSCSEG00000011261	trub1	97	55.814	Cynoglossus_semilaevis
ENSHGLG00000015314	TRUB1	74	64.729	ENSCVAG00000008791	trub1	79	64.729	Cyprinodon_variegatus
ENSHGLG00000015314	TRUB1	70	66.939	ENSDARG00000053805	trub1	84	66.939	Danio_rerio
ENSHGLG00000015314	TRUB1	97	82.941	ENSDNOG00000001069	TRUB1	100	82.336	Dasypus_novemcinctus
ENSHGLG00000015314	TRUB1	100	84.571	ENSDORG00000010431	Trub1	100	83.714	Dipodomys_ordii
ENSHGLG00000015314	TRUB1	64	85.915	ENSETEG00000009183	TRUB1	81	70.098	Echinops_telfairi
ENSHGLG00000015314	TRUB1	97	89.318	ENSEASG00005014739	TRUB1	100	88.286	Equus_asinus_asinus
ENSHGLG00000015314	TRUB1	97	89.318	ENSECAG00000007177	TRUB1	100	88.286	Equus_caballus
ENSHGLG00000015314	TRUB1	99	72.805	ENSEEUG00000013993	TRUB1	98	73.371	Erinaceus_europaeus
ENSHGLG00000015314	TRUB1	70	66.939	ENSELUG00000000502	trub1	86	66.939	Esox_lucius
ENSHGLG00000015314	TRUB1	86	90.333	ENSFCAG00000031927	TRUB1	99	86.819	Felis_catus
ENSHGLG00000015314	TRUB1	69	72.083	ENSFALG00000002232	TRUB1	92	72.083	Ficedula_albicollis
ENSHGLG00000015314	TRUB1	70	92.213	ENSFDAG00000008140	TRUB1	100	92.213	Fukomys_damarensis
ENSHGLG00000015314	TRUB1	70	66.531	ENSFHEG00000004016	trub1	84	66.531	Fundulus_heteroclitus
ENSHGLG00000015314	TRUB1	79	71.898	ENSGALG00000009091	TRUB1	96	71.898	Gallus_gallus
ENSHGLG00000015314	TRUB1	68	63.750	ENSGAFG00000009193	trub1	84	63.750	Gambusia_affinis
ENSHGLG00000015314	TRUB1	57	66.834	ENSGACG00000015387	trub1	98	66.834	Gasterosteus_aculeatus
ENSHGLG00000015314	TRUB1	94	64.080	ENSGAGG00000009758	TRUB1	81	73.333	Gopherus_agassizii
ENSHGLG00000015314	TRUB1	99	86.819	ENSGGOG00000004583	TRUB1	99	86.819	Gorilla_gorilla
ENSHGLG00000015314	TRUB1	77	63.296	ENSHBUG00000016787	trub1	95	63.636	Haplochromis_burtoni
ENSHGLG00000015314	TRUB1	70	96.721	ENSHGLG00100009183	TRUB1	100	96.721	Heterocephalus_glaber_male
ENSHGLG00000015314	TRUB1	76	62.687	ENSHCOG00000017877	trub1	97	62.687	Hippocampus_comes
ENSHGLG00000015314	TRUB1	76	65.038	ENSIPUG00000017559	trub1	94	65.038	Ictalurus_punctatus
ENSHGLG00000015314	TRUB1	87	90.728	ENSSTOG00000003641	TRUB1	100	83.429	Ictidomys_tridecemlineatus
ENSHGLG00000015314	TRUB1	86	86.333	ENSJJAG00000011800	Trub1	100	78.571	Jaculus_jaculus
ENSHGLG00000015314	TRUB1	72	64.981	ENSKMAG00000006232	trub1	92	64.981	Kryptolebias_marmoratus
ENSHGLG00000015314	TRUB1	70	66.667	ENSLBEG00000026722	trub1	86	66.667	Labrus_bergylta
ENSHGLG00000015314	TRUB1	77	71.642	ENSLACG00000014885	TRUB1	89	71.642	Latimeria_chalumnae
ENSHGLG00000015314	TRUB1	78	67.033	ENSLOCG00000012979	trub1	93	67.033	Lepisosteus_oculatus
ENSHGLG00000015314	TRUB1	99	74.790	ENSLAFG00000015452	TRUB1	99	75.630	Loxodonta_africana
ENSHGLG00000015314	TRUB1	99	86.819	ENSMFAG00000031767	TRUB1	99	86.819	Macaca_fascicularis
ENSHGLG00000015314	TRUB1	99	87.106	ENSMMUG00000001902	TRUB1	99	87.106	Macaca_mulatta
ENSHGLG00000015314	TRUB1	99	83.095	ENSMNEG00000044646	TRUB1	99	83.095	Macaca_nemestrina
ENSHGLG00000015314	TRUB1	99	86.819	ENSMLEG00000042655	TRUB1	99	86.819	Mandrillus_leucophaeus
ENSHGLG00000015314	TRUB1	72	65.476	ENSMZEG00005024095	trub1	91	65.476	Maylandia_zebra
ENSHGLG00000015314	TRUB1	75	73.282	ENSMGAG00000011135	TRUB1	90	73.282	Meleagris_gallopavo
ENSHGLG00000015314	TRUB1	81	81.495	ENSMAUG00000011101	Trub1	100	75.645	Mesocricetus_auratus
ENSHGLG00000015314	TRUB1	100	87.679	ENSMICG00000016324	TRUB1	100	87.679	Microcebus_murinus
ENSHGLG00000015314	TRUB1	93	79.141	ENSMOCG00000017759	Trub1	100	75.358	Microtus_ochrogaster
ENSHGLG00000015314	TRUB1	82	79.371	ENSMODG00000009676	TRUB1	81	78.157	Monodelphis_domestica
ENSHGLG00000015314	TRUB1	100	76.504	MGP_CAROLIEiJ_G0023100	Trub1	100	75.000	Mus_caroli
ENSHGLG00000015314	TRUB1	100	75.358	ENSMUSG00000025086	Trub1	100	74.148	Mus_musculus
ENSHGLG00000015314	TRUB1	100	76.218	MGP_PahariEiJ_G0014588	Trub1	100	75.000	Mus_pahari
ENSHGLG00000015314	TRUB1	100	75.645	MGP_SPRETEiJ_G0024021	Trub1	100	74.432	Mus_spretus
ENSHGLG00000015314	TRUB1	96	88.690	ENSMPUG00000003556	TRUB1	99	87.679	Mustela_putorius_furo
ENSHGLG00000015314	TRUB1	96	84.431	ENSMLUG00000017686	TRUB1	99	81.429	Myotis_lucifugus
ENSHGLG00000015314	TRUB1	100	83.668	ENSNGAG00000018682	Trub1	100	83.668	Nannospalax_galili
ENSHGLG00000015314	TRUB1	70	67.073	ENSNBRG00000023393	trub1	88	67.073	Neolamprologus_brichardi
ENSHGLG00000015314	TRUB1	96	87.500	ENSNLEG00000016345	TRUB1	99	86.246	Nomascus_leucogenys
ENSHGLG00000015314	TRUB1	58	88.060	ENSMEUG00000006603	TRUB1	77	85.646	Notamacropus_eugenii
ENSHGLG00000015314	TRUB1	87	82.450	ENSOPRG00000009371	TRUB1	87	82.333	Ochotona_princeps
ENSHGLG00000015314	TRUB1	99	85.345	ENSODEG00000010854	TRUB1	100	85.100	Octodon_degus
ENSHGLG00000015314	TRUB1	70	66.667	ENSONIG00000007249	trub1	89	66.667	Oreochromis_niloticus
ENSHGLG00000015314	TRUB1	79	77.899	ENSOANG00000001556	TRUB1	94	75.789	Ornithorhynchus_anatinus
ENSHGLG00000015314	TRUB1	96	83.234	ENSOCUG00000009456	TRUB1	97	83.234	Oryctolagus_cuniculus
ENSHGLG00000015314	TRUB1	76	62.406	ENSORLG00000029719	trub1	91	62.172	Oryzias_latipes
ENSHGLG00000015314	TRUB1	77	61.798	ENSORLG00020016767	trub1	89	61.798	Oryzias_latipes_hni
ENSHGLG00000015314	TRUB1	77	61.798	ENSORLG00015014728	trub1	91	61.798	Oryzias_latipes_hsok
ENSHGLG00000015314	TRUB1	74	65.891	ENSOMEG00000014556	trub1	85	68.465	Oryzias_melastigma
ENSHGLG00000015314	TRUB1	100	88.000	ENSOGAG00000015895	TRUB1	100	88.000	Otolemur_garnettii
ENSHGLG00000015314	TRUB1	85	88.449	ENSOARG00000015591	TRUB1	100	82.913	Ovis_aries
ENSHGLG00000015314	TRUB1	99	86.819	ENSPPAG00000043645	TRUB1	99	86.819	Pan_paniscus
ENSHGLG00000015314	TRUB1	86	89.667	ENSPPRG00000007096	TRUB1	99	86.167	Panthera_pardus
ENSHGLG00000015314	TRUB1	86	90.000	ENSPTIG00000006378	TRUB1	99	86.455	Panthera_tigris_altaica
ENSHGLG00000015314	TRUB1	99	86.819	ENSPTRG00000002964	TRUB1	99	86.819	Pan_troglodytes
ENSHGLG00000015314	TRUB1	99	86.819	ENSPANG00000020712	TRUB1	99	86.819	Papio_anubis
ENSHGLG00000015314	TRUB1	79	72.993	ENSPSIG00000012877	TRUB1	94	72.993	Pelodiscus_sinensis
ENSHGLG00000015314	TRUB1	70	64.490	ENSPMGG00000000075	trub1	88	64.490	Periophthalmus_magnuspinnatus
ENSHGLG00000015314	TRUB1	86	81.395	ENSPEMG00000011156	Trub1	100	74.499	Peromyscus_maniculatus_bairdii
ENSHGLG00000015314	TRUB1	82	78.671	ENSPCIG00000009729	TRUB1	79	77.740	Phascolarctos_cinereus
ENSHGLG00000015314	TRUB1	70	64.490	ENSPFOG00000009950	trub1	90	64.490	Poecilia_formosa
ENSHGLG00000015314	TRUB1	70	64.490	ENSPLAG00000013855	trub1	86	64.490	Poecilia_latipinna
ENSHGLG00000015314	TRUB1	70	64.490	ENSPMEG00000009064	trub1	88	64.490	Poecilia_mexicana
ENSHGLG00000015314	TRUB1	70	65.306	ENSPREG00000003343	trub1	88	65.306	Poecilia_reticulata
ENSHGLG00000015314	TRUB1	96	87.500	ENSPPYG00000002676	TRUB1	99	86.246	Pongo_abelii
ENSHGLG00000015314	TRUB1	99	70.170	ENSPCAG00000008427	TRUB1	99	70.170	Procavia_capensis
ENSHGLG00000015314	TRUB1	100	82.521	ENSPCOG00000024360	TRUB1	100	82.521	Propithecus_coquereli
ENSHGLG00000015314	TRUB1	75	87.833	ENSPVAG00000007575	TRUB1	100	87.833	Pteropus_vampyrus
ENSHGLG00000015314	TRUB1	72	65.476	ENSPNYG00000018614	trub1	91	65.476	Pundamilia_nyererei
ENSHGLG00000015314	TRUB1	74	58.077	ENSPNAG00000006881	trub1	84	58.077	Pygocentrus_nattereri
ENSHGLG00000015314	TRUB1	100	77.364	ENSRNOG00000017321	Trub1	100	75.000	Rattus_norvegicus
ENSHGLG00000015314	TRUB1	99	77.364	ENSRBIG00000033423	TRUB1	99	77.364	Rhinopithecus_bieti
ENSHGLG00000015314	TRUB1	99	86.819	ENSRROG00000033902	TRUB1	99	86.819	Rhinopithecus_roxellana
ENSHGLG00000015314	TRUB1	96	88.690	ENSSBOG00000024237	TRUB1	99	86.857	Saimiri_boliviensis_boliviensis
ENSHGLG00000015314	TRUB1	73	77.344	ENSSHAG00000009346	TRUB1	86	77.344	Sarcophilus_harrisii
ENSHGLG00000015314	TRUB1	69	68.595	ENSSFOG00015022124	trub1	83	68.595	Scleropages_formosus
ENSHGLG00000015314	TRUB1	70	67.480	ENSSMAG00000001020	trub1	88	67.480	Scophthalmus_maximus
ENSHGLG00000015314	TRUB1	69	68.333	ENSSDUG00000016414	trub1	88	68.293	Seriola_dumerili
ENSHGLG00000015314	TRUB1	69	68.750	ENSSLDG00000015486	trub1	88	68.699	Seriola_lalandi_dorsalis
ENSHGLG00000015314	TRUB1	81	74.021	ENSSPUG00000001642	TRUB1	97	74.021	Sphenodon_punctatus
ENSHGLG00000015314	TRUB1	75	64.259	ENSSPAG00000001217	trub1	94	64.259	Stegastes_partitus
ENSHGLG00000015314	TRUB1	100	83.714	ENSSSCG00000010653	TRUB1	100	83.714	Sus_scrofa
ENSHGLG00000015314	TRUB1	77	72.222	ENSTGUG00000010971	TRUB1	97	72.059	Taeniopygia_guttata
ENSHGLG00000015314	TRUB1	72	74.704	ENSTBEG00000002880	TRUB1	99	74.704	Tupaia_belangeri
ENSHGLG00000015314	TRUB1	62	93.519	ENSTTRG00000005767	TRUB1	100	85.606	Tursiops_truncatus
ENSHGLG00000015314	TRUB1	86	92.027	ENSUAMG00000024876	TRUB1	99	87.966	Ursus_americanus
ENSHGLG00000015314	TRUB1	85	91.864	ENSUMAG00000002411	TRUB1	99	84.241	Ursus_maritimus
ENSHGLG00000015314	TRUB1	100	86.286	ENSVPAG00000005507	TRUB1	100	86.286	Vicugna_pacos
ENSHGLG00000015314	TRUB1	100	84.857	ENSVVUG00000010085	TRUB1	84	84.857	Vulpes_vulpes
ENSHGLG00000015314	TRUB1	76	64.662	ENSXETG00000023828	trub1	96	64.662	Xenopus_tropicalis
ENSHGLG00000015314	TRUB1	68	64.017	ENSXCOG00000017847	trub1	84	64.017	Xiphophorus_couchianus
ENSHGLG00000015314	TRUB1	77	60.300	ENSXMAG00000014701	trub1	88	64.082	Xiphophorus_maculatus