EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000015460 (Gene tree)
Gene ID: -
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 13711 bases
Position: chrJH602141.1:2474217-2487927
Accession: 101715433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000021635	RRM_1	PF00076.22	2.8e-29	1	3
ENSHGLP00000021635	RRM_1	PF00076.22	2.8e-29	2	3
ENSHGLP00000021635	RRM_1	PF00076.22	2.8e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000021845	RAVER1-201	4040	XM_004865489	ENSHGLP00000021635	739 (aa)	XP_004865546	-

Gene Model

Click here to download ENSHGLG00000015460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000015460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000015460	RAVER1	65	46.920	ENSHGLG00000018409	RAVER2	83	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000015460	RAVER1	100	89.637	ENSG00000161847	RAVER1	100	90.040	Homo_sapiens
ENSHGLG00000015460	RAVER1	100	88.814	ENSAMEG00000011738	RAVER1	98	89.084	Ailuropoda_melanoleuca
ENSHGLG00000015460	RAVER1	77	59.109	ENSAOCG00000005128	raver1	88	50.417	Amphiprion_ocellaris
ENSHGLG00000015460	RAVER1	77	61.039	ENSAPEG00000010854	raver1	82	61.039	Amphiprion_percula
ENSHGLG00000015460	RAVER1	100	50.529	ENSATEG00000021004	raver1	91	50.546	Anabas_testudineus
ENSHGLG00000015460	RAVER1	84	60.031	ENSACAG00000008386	-	91	59.299	Anolis_carolinensis
ENSHGLG00000015460	RAVER1	100	88.022	ENSANAG00000028226	RAVER1	98	88.829	Aotus_nancymaae
ENSHGLG00000015460	RAVER1	73	85.417	ENSACLG00000018492	raver1	90	50.275	Astatotilapia_calliptera
ENSHGLG00000015460	RAVER1	77	78.333	ENSAMXG00000005132	raver1	81	73.611	Astyanax_mexicanus
ENSHGLG00000015460	RAVER1	100	91.750	ENSBTAG00000015721	RAVER1	97	91.750	Bos_taurus
ENSHGLG00000015460	RAVER1	100	88.291	ENSCJAG00000005671	RAVER1	98	89.098	Callithrix_jacchus
ENSHGLG00000015460	RAVER1	100	87.197	ENSCAFG00000017861	RAVER1	98	87.736	Canis_familiaris
ENSHGLG00000015460	RAVER1	100	87.197	ENSCAFG00020024449	RAVER1	100	87.736	Canis_lupus_dingo
ENSHGLG00000015460	RAVER1	100	86.253	ENSCHIG00000006718	RAVER1	100	87.466	Capra_hircus
ENSHGLG00000015460	RAVER1	91	82.891	ENSTSYG00000027107	RAVER1	100	83.481	Carlito_syrichta
ENSHGLG00000015460	RAVER1	90	88.939	ENSCAPG00000002269	RAVER1	100	89.238	Cavia_aperea
ENSHGLG00000015460	RAVER1	100	91.644	ENSCPOG00000001008	RAVER1	100	91.779	Cavia_porcellus
ENSHGLG00000015460	RAVER1	100	88.964	ENSCCAG00000031723	RAVER1	98	89.367	Cebus_capucinus
ENSHGLG00000015460	RAVER1	100	89.906	ENSCATG00000043863	RAVER1	98	90.310	Cercocebus_atys
ENSHGLG00000015460	RAVER1	100	93.801	ENSCLAG00000009336	RAVER1	100	93.396	Chinchilla_lanigera
ENSHGLG00000015460	RAVER1	100	90.040	ENSCSAG00000007317	RAVER1	84	90.444	Chlorocebus_sabaeus
ENSHGLG00000015460	RAVER1	96	61.905	ENSCPBG00000005349	-	96	62.047	Chrysemys_picta_bellii
ENSHGLG00000015460	RAVER1	100	90.040	ENSCANG00000008337	RAVER1	98	90.444	Colobus_angolensis_palliatus
ENSHGLG00000015460	RAVER1	100	89.906	ENSCGRG00001013260	-	100	90.310	Cricetulus_griseus_chok1gshd
ENSHGLG00000015460	RAVER1	100	89.906	ENSCGRG00000015138	-	100	90.310	Cricetulus_griseus_crigri
ENSHGLG00000015460	RAVER1	74	78.846	ENSCSEG00000021092	raver1	75	78.846	Cynoglossus_semilaevis
ENSHGLG00000015460	RAVER1	97	49.730	ENSCVAG00000013971	raver1	79	60.606	Cyprinodon_variegatus
ENSHGLG00000015460	RAVER1	100	81.818	ENSDORG00000010106	-	100	81.950	Dipodomys_ordii
ENSHGLG00000015460	RAVER1	73	69.175	ENSETEG00000008201	-	76	84.925	Echinops_telfairi
ENSHGLG00000015460	RAVER1	65	92.289	ENSEASG00005010544	-	88	92.289	Equus_asinus_asinus
ENSHGLG00000015460	RAVER1	100	89.892	ENSECAG00000024966	RAVER1	98	91.105	Equus_caballus
ENSHGLG00000015460	RAVER1	97	51.852	ENSELUG00000023287	raver1	91	52.295	Esox_lucius
ENSHGLG00000015460	RAVER1	100	90.431	ENSFCAG00000009435	RAVER1	98	90.701	Felis_catus
ENSHGLG00000015460	RAVER1	100	94.872	ENSFDAG00000015113	RAVER1	100	94.872	Fukomys_damarensis
ENSHGLG00000015460	RAVER1	80	59.412	ENSGMOG00000003649	raver1	80	59.465	Gadus_morhua
ENSHGLG00000015460	RAVER1	66	44.689	ENSGALG00000050608	-	51	43.381	Gallus_gallus
ENSHGLG00000015460	RAVER1	98	51.913	ENSGAFG00000015944	raver1	90	51.261	Gambusia_affinis
ENSHGLG00000015460	RAVER1	83	67.218	ENSGACG00000013818	raver1	96	50.272	Gasterosteus_aculeatus
ENSHGLG00000015460	RAVER1	96	62.051	ENSGAGG00000011748	-	93	78.261	Gopherus_agassizii
ENSHGLG00000015460	RAVER1	100	89.637	ENSGGOG00000006015	RAVER1	98	90.040	Gorilla_gorilla
ENSHGLG00000015460	RAVER1	73	82.353	ENSHBUG00000021210	raver1	90	50.000	Haplochromis_burtoni
ENSHGLG00000015460	RAVER1	100	100.000	ENSHGLG00100000812	RAVER1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000015460	RAVER1	97	50.411	ENSIPUG00000013153	raver1	81	59.804	Ictalurus_punctatus
ENSHGLG00000015460	RAVER1	100	89.651	ENSSTOG00000003241	RAVER1	100	90.591	Ictidomys_tridecemlineatus
ENSHGLG00000015460	RAVER1	100	89.651	ENSJJAG00000018219	-	100	89.113	Jaculus_jaculus
ENSHGLG00000015460	RAVER1	98	50.265	ENSKMAG00000017355	raver1	91	50.477	Kryptolebias_marmoratus
ENSHGLG00000015460	RAVER1	68	59.136	ENSLBEG00000008268	raver1	68	58.882	Labrus_bergylta
ENSHGLG00000015460	RAVER1	90	59.510	ENSLACG00000005809	-	99	59.514	Latimeria_chalumnae
ENSHGLG00000015460	RAVER1	97	54.714	ENSLOCG00000007500	raver1	92	55.616	Lepisosteus_oculatus
ENSHGLG00000015460	RAVER1	100	90.676	ENSLAFG00000003664	-	95	95.000	Loxodonta_africana
ENSHGLG00000015460	RAVER1	100	89.637	ENSMFAG00000037977	RAVER1	98	90.040	Macaca_fascicularis
ENSHGLG00000015460	RAVER1	100	89.906	ENSMMUG00000014897	RAVER1	98	90.310	Macaca_mulatta
ENSHGLG00000015460	RAVER1	100	89.906	ENSMNEG00000028390	RAVER1	98	90.310	Macaca_nemestrina
ENSHGLG00000015460	RAVER1	100	89.906	ENSMLEG00000041959	RAVER1	98	90.310	Mandrillus_leucophaeus
ENSHGLG00000015460	RAVER1	75	77.358	ENSMAMG00000012059	raver1	77	71.667	Mastacembelus_armatus
ENSHGLG00000015460	RAVER1	73	85.417	ENSMZEG00005019002	raver1	91	50.612	Maylandia_zebra
ENSHGLG00000015460	RAVER1	100	89.799	ENSMAUG00000017948	-	100	89.664	Mesocricetus_auratus
ENSHGLG00000015460	RAVER1	99	87.719	ENSMICG00000010326	RAVER1	99	87.989	Microcebus_murinus
ENSHGLG00000015460	RAVER1	100	89.771	ENSMOCG00000015553	-	100	90.175	Microtus_ochrogaster
ENSHGLG00000015460	RAVER1	97	49.866	ENSMMOG00000012093	raver1	91	50.069	Mola_mola
ENSHGLG00000015460	RAVER1	97	75.000	ENSMODG00000005584	-	89	73.619	Monodelphis_domestica
ENSHGLG00000015460	RAVER1	81	57.647	ENSMALG00000016569	raver1	79	57.685	Monopterus_albus
ENSHGLG00000015460	RAVER1	100	87.717	MGP_CAROLIEiJ_G0031860	-	100	87.450	Mus_caroli
ENSHGLG00000015460	RAVER1	100	87.850	ENSMUSG00000010205	Raver1	100	88.385	Mus_musculus
ENSHGLG00000015460	RAVER1	100	86.454	MGP_PahariEiJ_G0014726	-	100	86.985	Mus_pahari
ENSHGLG00000015460	RAVER1	100	87.717	MGP_SPRETEiJ_G0032984	-	100	88.251	Mus_spretus
ENSHGLG00000015460	RAVER1	100	90.970	ENSMPUG00000006712	RAVER1	98	90.701	Mustela_putorius_furo
ENSHGLG00000015460	RAVER1	100	86.523	ENSMLUG00000012328	RAVER1	100	87.466	Myotis_lucifugus
ENSHGLG00000015460	RAVER1	100	89.233	ENSNGAG00000001260	-	100	89.367	Nannospalax_galili
ENSHGLG00000015460	RAVER1	78	63.750	ENSNBRG00000010139	raver1	90	44.959	Neolamprologus_brichardi
ENSHGLG00000015460	RAVER1	100	89.367	ENSNLEG00000012181	RAVER1	98	89.771	Nomascus_leucogenys
ENSHGLG00000015460	RAVER1	90	74.516	ENSMEUG00000003281	-	100	74.367	Notamacropus_eugenii
ENSHGLG00000015460	RAVER1	50	89.062	ENSOPRG00000005855	-	51	89.844	Ochotona_princeps
ENSHGLG00000015460	RAVER1	100	91.914	ENSODEG00000016260	RAVER1	100	92.453	Octodon_degus
ENSHGLG00000015460	RAVER1	96	50.549	ENSONIG00000001559	raver1	99	51.381	Oreochromis_niloticus
ENSHGLG00000015460	RAVER1	100	83.671	ENSOCUG00000020918	RAVER1	98	84.211	Oryctolagus_cuniculus
ENSHGLG00000015460	RAVER1	66	66.834	ENSORLG00000005458	raver1	66	67.347	Oryzias_latipes
ENSHGLG00000015460	RAVER1	66	66.583	ENSORLG00020004392	raver1	66	67.092	Oryzias_latipes_hni
ENSHGLG00000015460	RAVER1	66	66.332	ENSORLG00015017222	raver1	66	66.837	Oryzias_latipes_hsok
ENSHGLG00000015460	RAVER1	60	81.633	ENSOMEG00000023956	raver1	66	81.633	Oryzias_melastigma
ENSHGLG00000015460	RAVER1	100	88.949	ENSOGAG00000011071	RAVER1	98	89.353	Otolemur_garnettii
ENSHGLG00000015460	RAVER1	100	85.405	ENSOARG00000015886	RAVER1	98	85.946	Ovis_aries
ENSHGLG00000015460	RAVER1	100	89.637	ENSPPAG00000002611	RAVER1	98	90.040	Pan_paniscus
ENSHGLG00000015460	RAVER1	100	90.836	ENSPPRG00000009912	RAVER1	98	91.105	Panthera_pardus
ENSHGLG00000015460	RAVER1	100	89.637	ENSPTRG00000010466	RAVER1	98	90.040	Pan_troglodytes
ENSHGLG00000015460	RAVER1	100	90.040	ENSPANG00000004122	RAVER1	98	90.444	Papio_anubis
ENSHGLG00000015460	RAVER1	100	89.919	ENSPEMG00000016411	-	100	90.726	Peromyscus_maniculatus_bairdii
ENSHGLG00000015460	RAVER1	100	76.305	ENSPCIG00000018695	-	100	74.565	Phascolarctos_cinereus
ENSHGLG00000015460	RAVER1	79	55.490	ENSPLAG00000020793	raver1	57	71.221	Poecilia_latipinna
ENSHGLG00000015460	RAVER1	96	52.394	ENSPMEG00000011220	raver1	90	51.667	Poecilia_mexicana
ENSHGLG00000015460	RAVER1	74	88.372	ENSPREG00000006864	raver1	75	88.372	Poecilia_reticulata
ENSHGLG00000015460	RAVER1	100	88.694	ENSPPYG00000010514	RAVER1	84	89.502	Pongo_abelii
ENSHGLG00000015460	RAVER1	100	89.502	ENSPCOG00000026605	RAVER1	98	90.444	Propithecus_coquereli
ENSHGLG00000015460	RAVER1	100	88.934	ENSPVAG00000003689	RAVER1	100	89.744	Pteropus_vampyrus
ENSHGLG00000015460	RAVER1	64	82.353	ENSPNYG00000013284	raver1	63	82.353	Pundamilia_nyererei
ENSHGLG00000015460	RAVER1	99	50.727	ENSPNAG00000015476	raver1	91	51.950	Pygocentrus_nattereri
ENSHGLG00000015460	RAVER1	100	87.583	ENSRNOG00000020710	Raver1	100	88.117	Rattus_norvegicus
ENSHGLG00000015460	RAVER1	100	89.906	ENSRBIG00000034702	RAVER1	98	90.579	Rhinopithecus_bieti
ENSHGLG00000015460	RAVER1	100	87.752	ENSRROG00000031186	RAVER1	98	87.887	Rhinopithecus_roxellana
ENSHGLG00000015460	RAVER1	100	86.406	ENSSBOG00000023423	RAVER1	98	86.541	Saimiri_boliviensis_boliviensis
ENSHGLG00000015460	RAVER1	90	75.037	ENSSHAG00000008181	-	90	74.446	Sarcophilus_harrisii
ENSHGLG00000015460	RAVER1	79	60.714	ENSSDUG00000021063	raver1	91	51.897	Seriola_dumerili
ENSHGLG00000015460	RAVER1	79	60.714	ENSSLDG00000014505	raver1	80	59.200	Seriola_lalandi_dorsalis
ENSHGLG00000015460	RAVER1	78	60.772	ENSSPAG00000000688	raver1	82	56.391	Stegastes_partitus
ENSHGLG00000015460	RAVER1	100	90.027	ENSSSCG00000013650	-	98	90.701	Sus_scrofa
ENSHGLG00000015460	RAVER1	96	49.728	ENSTRUG00000025641	raver1	91	49.241	Takifugu_rubripes
ENSHGLG00000015460	RAVER1	100	88.679	ENSTTRG00000009552	RAVER1	100	90.027	Tursiops_truncatus
ENSHGLG00000015460	RAVER1	100	90.701	ENSUAMG00000020385	RAVER1	98	90.970	Ursus_americanus
ENSHGLG00000015460	RAVER1	100	87.332	ENSVVUG00000028976	RAVER1	98	87.871	Vulpes_vulpes
ENSHGLG00000015460	RAVER1	100	55.585	ENSXETG00000011622	raver1	94	57.004	Xenopus_tropicalis
ENSHGLG00000015460	RAVER1	82	59.800	ENSXCOG00000016368	raver1	77	59.875	Xiphophorus_couchianus
ENSHGLG00000015460	RAVER1	98	51.503	ENSXMAG00000000217	raver1	77	59.875	Xiphophorus_maculatus