EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000015576 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 55613 bases
Position: chrJH602053.1:14873396-14929008
Accession: 101715755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000021808	cwf21	PF08312.12	6.7e-17	1	1
ENSHGLP00000021809	cwf21	PF08312.12	1.3e-15	1	1
ENSHGLP00000021809	SRRM_C	PF15230.6	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000022018	SRRM3-201	3313	-	ENSHGLP00000021808	124 (aa)	-	-
ENSHGLT00000022019	SRRM3-202	1845	XM_004840093	ENSHGLP00000021809	614 (aa)	XP_004840150	-

Gene Model

Click here to download ENSHGLG00000015576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000015576's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000015576	SRRM3	90	77.679	ENSAPLG00000004545	SRRM3	52	65.657	Anas_platyrhynchos
ENSHGLG00000015576	SRRM3	100	90.323	ENSBTAG00000007879	-	98	68.038	Bos_taurus
ENSHGLG00000015576	SRRM3	100	91.935	ENSCAFG00000013537	SRRM3	55	69.940	Canis_familiaris
ENSHGLG00000015576	SRRM3	100	91.935	ENSCAFG00020013073	SRRM3	88	73.548	Canis_lupus_dingo
ENSHGLG00000015576	SRRM3	100	91.129	ENSCHIG00000014018	SRRM3	59	74.052	Capra_hircus
ENSHGLG00000015576	SRRM3	100	95.968	ENSCLAG00000007682	SRRM3	100	95.968	Chinchilla_lanigera
ENSHGLG00000015576	SRRM3	100	91.129	ENSEASG00005016840	-	88	70.000	Equus_asinus_asinus
ENSHGLG00000015576	SRRM3	100	91.129	ENSECAG00000022142	-	88	70.206	Equus_caballus
ENSHGLG00000015576	SRRM3	65	98.765	ENSFDAG00000016913	SRRM3	100	98.765	Fukomys_damarensis
ENSHGLG00000015576	SRRM3	100	92.742	ENSSTOG00000014181	SRRM3	100	92.742	Ictidomys_tridecemlineatus
ENSHGLG00000015576	SRRM3	99	69.600	ENSJJAG00000023441	Srrm3	60	63.859	Jaculus_jaculus
ENSHGLG00000015576	SRRM3	50	56.452	ENSLACG00000008008	SRRM3	50	53.191	Latimeria_chalumnae
ENSHGLG00000015576	SRRM3	97	74.167	ENSMGAG00000003690	SRRM3	51	66.162	Meleagris_gallopavo
ENSHGLG00000015576	SRRM3	100	90.323	ENSMAUG00000017613	Srrm3	100	90.323	Mesocricetus_auratus
ENSHGLG00000015576	SRRM3	100	90.323	MGP_CAROLIEiJ_G0027845	-	97	69.970	Mus_caroli
ENSHGLG00000015576	SRRM3	100	90.323	ENSMUSG00000039860	Srrm3	100	90.323	Mus_musculus
ENSHGLG00000015576	SRRM3	100	91.129	MGP_PahariEiJ_G0024425	Srrm3	100	91.129	Mus_pahari
ENSHGLG00000015576	SRRM3	100	91.129	MGP_SPRETEiJ_G0028844	Srrm3	100	91.129	Mus_spretus
ENSHGLG00000015576	SRRM3	100	90.323	ENSODEG00000015988	SRRM3	64	77.083	Octodon_degus
ENSHGLG00000015576	SRRM3	98	89.344	ENSOGAG00000030805	SRRM3	55	70.765	Otolemur_garnettii
ENSHGLG00000015576	SRRM3	100	91.129	ENSPEMG00000012358	-	100	91.129	Peromyscus_maniculatus_bairdii
ENSHGLG00000015576	SRRM3	100	67.742	ENSPCAG00000013700	SRRM3	76	81.818	Procavia_capensis
ENSHGLG00000015576	SRRM3	100	92.742	ENSRROG00000034980	SRRM3	94	92.073	Rhinopithecus_roxellana
ENSHGLG00000015576	SRRM3	89	77.273	ENSSPUG00000006285	SRRM3	65	77.273	Sphenodon_punctatus
ENSHGLG00000015576	SRRM3	90	92.793	ENSTTRG00000014836	-	52	84.298	Tursiops_truncatus