EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000015883 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 32180 bases
Position: chrJH602141.1:4525536-4557715
Accession: 101713322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000022278	RRM_5	PF13893.6	1e-06	1	1
ENSHGLP00000022278	RRM_1	PF00076.22	2.8e-13	1	1
ENSHGLP00000022278	SAP	PF02037.27	8.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000022489	SAFB-201	4539	XM_004865686	ENSHGLP00000022278	929 (aa)	XP_004865743	-

Gene Model

Click here to download ENSHGLG00000015883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000015883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000015883	SAFB	100	69.421	ENSHGLG00000017442	SAFB2	66	72.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000015883	SAFB	100	90.568	ENSG00000160633	SAFB	100	90.471	Homo_sapiens
ENSHGLG00000015883	SAFB	100	89.744	ENSAMEG00000012254	SAFB	100	88.889	Ailuropoda_melanoleuca
ENSHGLG00000015883	SAFB	94	39.576	ENSACIG00000006247	safb	70	41.951	Amphilophus_citrinellus
ENSHGLG00000015883	SAFB	90	62.105	ENSAPLG00000006355	-	65	59.201	Anas_platyrhynchos
ENSHGLG00000015883	SAFB	94	63.420	ENSAPLG00000005780	-	100	63.986	Anas_platyrhynchos
ENSHGLG00000015883	SAFB	100	89.936	ENSANAG00000028821	SAFB	100	89.936	Aotus_nancymaae
ENSHGLG00000015883	SAFB	91	44.255	ENSAMXG00000018154	safb	63	42.810	Astyanax_mexicanus
ENSHGLG00000015883	SAFB	100	85.760	ENSBTAG00000007875	SAFB	100	85.760	Bos_taurus
ENSHGLG00000015883	SAFB	94	94.340	ENSCJAG00000017081	SAFB	100	94.340	Callithrix_jacchus
ENSHGLG00000015883	SAFB	100	91.309	ENSCAFG00000018803	SAFB	87	91.309	Canis_familiaris
ENSHGLG00000015883	SAFB	100	91.309	ENSCAFG00020018943	SAFB	100	91.309	Canis_lupus_dingo
ENSHGLG00000015883	SAFB	100	84.582	ENSCHIG00000007262	SAFB	98	90.566	Capra_hircus
ENSHGLG00000015883	SAFB	57	77.444	ENSTSYG00000001851	-	53	89.630	Carlito_syrichta
ENSHGLG00000015883	SAFB	100	93.610	ENSCPOG00000026322	SAFB	100	93.610	Cavia_porcellus
ENSHGLG00000015883	SAFB	100	90.374	ENSCCAG00000020193	SAFB	100	90.267	Cebus_capucinus
ENSHGLG00000015883	SAFB	100	90.471	ENSCATG00000029994	SAFB	100	90.471	Cercocebus_atys
ENSHGLG00000015883	SAFB	100	97.859	ENSCLAG00000007734	SAFB	100	97.859	Chinchilla_lanigera
ENSHGLG00000015883	SAFB	100	90.471	ENSCSAG00000009949	SAFB	100	90.471	Chlorocebus_sabaeus
ENSHGLG00000015883	SAFB	87	92.857	ENSCHOG00000003208	SAFB	93	92.857	Choloepus_hoffmanni
ENSHGLG00000015883	SAFB	91	60.222	ENSCPBG00000010936	-	63	58.103	Chrysemys_picta_bellii
ENSHGLG00000015883	SAFB	91	63.837	ENSCPBG00000010928	-	64	60.432	Chrysemys_picta_bellii
ENSHGLG00000015883	SAFB	100	85.086	ENSCANG00000019754	-	100	85.086	Colobus_angolensis_palliatus
ENSHGLG00000015883	SAFB	95	92.040	ENSCANG00000004774	-	99	92.040	Colobus_angolensis_palliatus
ENSHGLG00000015883	SAFB	100	86.581	ENSCGRG00001002254	Safb	100	86.581	Cricetulus_griseus_chok1gshd
ENSHGLG00000015883	SAFB	90	83.657	ENSCGRG00000011529	Safb	96	83.657	Cricetulus_griseus_crigri
ENSHGLG00000015883	SAFB	94	40.251	ENSCSEG00000019870	safb	65	38.640	Cynoglossus_semilaevis
ENSHGLG00000015883	SAFB	90	40.888	ENSDARG00000020467	safb	60	60.000	Danio_rerio
ENSHGLG00000015883	SAFB	100	88.663	ENSDNOG00000015746	SAFB	95	88.393	Dasypus_novemcinctus
ENSHGLG00000015883	SAFB	100	86.823	ENSDORG00000016200	Safb	100	86.638	Dipodomys_ordii
ENSHGLG00000015883	SAFB	80	83.333	ENSETEG00000018679	SAFB	85	83.333	Echinops_telfairi
ENSHGLG00000015883	SAFB	100	85.942	ENSEASG00005023019	SAFB	100	85.410	Equus_asinus_asinus
ENSHGLG00000015883	SAFB	100	88.210	ENSECAG00000018659	SAFB	89	88.210	Equus_caballus
ENSHGLG00000015883	SAFB	96	42.241	ENSELUG00000022327	safb	67	48.826	Esox_lucius
ENSHGLG00000015883	SAFB	100	91.533	ENSFCAG00000011835	SAFB	100	91.533	Felis_catus
ENSHGLG00000015883	SAFB	100	64.165	ENSFALG00000013882	-	92	63.521	Ficedula_albicollis
ENSHGLG00000015883	SAFB	91	57.350	ENSFALG00000013881	-	64	57.886	Ficedula_albicollis
ENSHGLG00000015883	SAFB	95	91.130	ENSFDAG00000020306	SAFB	99	97.774	Fukomys_damarensis
ENSHGLG00000015883	SAFB	68	57.265	ENSFHEG00000004219	safb	64	36.424	Fundulus_heteroclitus
ENSHGLG00000015883	SAFB	100	64.013	ENSGALG00000013365	-	100	63.376	Gallus_gallus
ENSHGLG00000015883	SAFB	73	58.576	ENSGAGG00000017702	-	51	52.381	Gopherus_agassizii
ENSHGLG00000015883	SAFB	95	60.934	ENSGAGG00000008424	-	67	59.655	Gopherus_agassizii
ENSHGLG00000015883	SAFB	100	90.257	ENSGGOG00000015109	SAFB	100	90.257	Gorilla_gorilla
ENSHGLG00000015883	SAFB	91	36.117	ENSHCOG00000001705	safb	64	36.063	Hippocampus_comes
ENSHGLG00000015883	SAFB	97	45.210	ENSIPUG00000024869	safb2	63	45.588	Ictalurus_punctatus
ENSHGLG00000015883	SAFB	93	95.040	ENSSTOG00000002783	SAFB	100	95.040	Ictidomys_tridecemlineatus
ENSHGLG00000015883	SAFB	100	87.898	ENSJJAG00000009021	Safb	100	88.323	Jaculus_jaculus
ENSHGLG00000015883	SAFB	95	40.446	ENSLBEG00000006015	safb	63	42.251	Labrus_bergylta
ENSHGLG00000015883	SAFB	64	50.478	ENSLACG00000018090	SAFB	66	51.501	Latimeria_chalumnae
ENSHGLG00000015883	SAFB	96	45.797	ENSLOCG00000003613	safb	74	45.358	Lepisosteus_oculatus
ENSHGLG00000015883	SAFB	99	88.065	ENSLAFG00000003840	SAFB	100	86.989	Loxodonta_africana
ENSHGLG00000015883	SAFB	100	90.374	ENSMFAG00000003885	SAFB	100	90.267	Macaca_fascicularis
ENSHGLG00000015883	SAFB	100	90.471	ENSMMUG00000017970	SAFB	100	90.471	Macaca_mulatta
ENSHGLG00000015883	SAFB	100	86.738	ENSMNEG00000035637	SAFB	100	86.310	Macaca_nemestrina
ENSHGLG00000015883	SAFB	100	84.861	ENSMLEG00000038637	SAFB	100	83.439	Mandrillus_leucophaeus
ENSHGLG00000015883	SAFB	90	41.629	ENSMZEG00005009120	safb	65	41.812	Maylandia_zebra
ENSHGLG00000015883	SAFB	97	61.732	ENSMGAG00000001101	-	100	60.812	Meleagris_gallopavo
ENSHGLG00000015883	SAFB	89	59.080	ENSMGAG00000001051	-	100	59.338	Meleagris_gallopavo
ENSHGLG00000015883	SAFB	52	90.947	ENSMAUG00000005013	Safb	100	90.947	Mesocricetus_auratus
ENSHGLG00000015883	SAFB	100	86.403	ENSMICG00000008739	-	100	85.653	Microcebus_murinus
ENSHGLG00000015883	SAFB	85	76.005	ENSMICG00000046795	-	98	91.489	Microcebus_murinus
ENSHGLG00000015883	SAFB	100	86.383	ENSMOCG00000014040	Safb	100	86.383	Microtus_ochrogaster
ENSHGLG00000015883	SAFB	100	72.851	ENSMODG00000001236	SAFB	100	72.851	Monodelphis_domestica
ENSHGLG00000015883	SAFB	93	41.394	ENSMALG00000020330	safb	68	41.548	Monopterus_albus
ENSHGLG00000015883	SAFB	100	86.873	MGP_CAROLIEiJ_G0021780	Safb	100	86.873	Mus_caroli
ENSHGLG00000015883	SAFB	100	86.873	ENSMUSG00000071054	Safb	100	86.873	Mus_musculus
ENSHGLG00000015883	SAFB	100	86.887	MGP_PahariEiJ_G0020769	Safb	100	86.887	Mus_pahari
ENSHGLG00000015883	SAFB	100	90.471	ENSMPUG00000006123	SAFB	94	90.471	Mustela_putorius_furo
ENSHGLG00000015883	SAFB	100	89.400	ENSMLUG00000001081	SAFB	100	89.400	Myotis_lucifugus
ENSHGLG00000015883	SAFB	100	84.894	ENSNGAG00000019882	Safb	100	84.787	Nannospalax_galili
ENSHGLG00000015883	SAFB	96	90.513	ENSNLEG00000013551	SAFB	100	90.402	Nomascus_leucogenys
ENSHGLG00000015883	SAFB	89	83.918	ENSOPRG00000011561	-	100	84.643	Ochotona_princeps
ENSHGLG00000015883	SAFB	100	98.073	ENSODEG00000014838	SAFB	100	98.073	Octodon_degus
ENSHGLG00000015883	SAFB	94	40.777	ENSONIG00000002318	safb	64	41.842	Oreochromis_niloticus
ENSHGLG00000015883	SAFB	90	81.183	ENSOCUG00000014628	SAFB	63	84.944	Oryctolagus_cuniculus
ENSHGLG00000015883	SAFB	94	40.455	ENSORLG00020000404	safb	51	55.738	Oryzias_latipes_hni
ENSHGLG00000015883	SAFB	100	85.256	ENSOGAG00000027769	SAFB	100	84.861	Otolemur_garnettii
ENSHGLG00000015883	SAFB	100	82.013	ENSOARG00000007662	-	100	80.086	Ovis_aries
ENSHGLG00000015883	SAFB	78	79.343	ENSOARG00000007856	-	100	79.070	Ovis_aries
ENSHGLG00000015883	SAFB	100	90.267	ENSPPAG00000035129	SAFB	100	90.160	Pan_paniscus
ENSHGLG00000015883	SAFB	100	91.533	ENSPPRG00000017197	SAFB	100	91.533	Panthera_pardus
ENSHGLG00000015883	SAFB	100	90.267	ENSPTRG00000010335	SAFB	100	90.160	Pan_troglodytes
ENSHGLG00000015883	SAFB	100	90.267	ENSPANG00000007770	SAFB	100	90.160	Papio_anubis
ENSHGLG00000015883	SAFB	95	42.328	ENSPKIG00000009902	safb	81	43.939	Paramormyrops_kingsleyae
ENSHGLG00000015883	SAFB	100	60.145	ENSPSIG00000011679	-	64	59.863	Pelodiscus_sinensis
ENSHGLG00000015883	SAFB	99	60.725	ENSPSIG00000009367	-	63	58.604	Pelodiscus_sinensis
ENSHGLG00000015883	SAFB	100	87.114	ENSPEMG00000020428	Safb	100	87.114	Peromyscus_maniculatus_bairdii
ENSHGLG00000015883	SAFB	57	79.444	ENSPCIG00000009504	-	100	79.444	Phascolarctos_cinereus
ENSHGLG00000015883	SAFB	88	39.763	ENSPFOG00000007745	safb	72	38.336	Poecilia_formosa
ENSHGLG00000015883	SAFB	94	38.239	ENSPLAG00000001614	safb	66	38.799	Poecilia_latipinna
ENSHGLG00000015883	SAFB	73	42.882	ENSPREG00000012496	safb	52	47.766	Poecilia_reticulata
ENSHGLG00000015883	SAFB	100	90.880	ENSPPYG00000009428	SAFB	100	90.880	Pongo_abelii
ENSHGLG00000015883	SAFB	100	84.318	ENSPCAG00000006475	SAFB	100	84.640	Procavia_capensis
ENSHGLG00000015883	SAFB	100	82.497	ENSPCOG00000014090	SAFB	100	79.657	Propithecus_coquereli
ENSHGLG00000015883	SAFB	100	82.208	ENSPVAG00000004913	SAFB	100	82.529	Pteropus_vampyrus
ENSHGLG00000015883	SAFB	68	61.475	ENSPNAG00000021838	safb	64	43.387	Pygocentrus_nattereri
ENSHGLG00000015883	SAFB	100	87.234	ENSRNOG00000050543	Safb	100	87.234	Rattus_norvegicus
ENSHGLG00000015883	SAFB	96	82.270	ENSRBIG00000042509	SAFB	88	95.699	Rhinopithecus_bieti
ENSHGLG00000015883	SAFB	100	90.481	ENSRROG00000029278	SAFB	100	90.374	Rhinopithecus_roxellana
ENSHGLG00000015883	SAFB	100	90.471	ENSSBOG00000026291	SAFB	100	90.471	Saimiri_boliviensis_boliviensis
ENSHGLG00000015883	SAFB	96	43.810	ENSSFOG00015008156	safb	65	45.469	Scleropages_formosus
ENSHGLG00000015883	SAFB	93	83.008	ENSSARG00000010475	SAFB	100	82.893	Sorex_araneus
ENSHGLG00000015883	SAFB	59	56.102	ENSSPUG00000009747	-	67	55.801	Sphenodon_punctatus
ENSHGLG00000015883	SAFB	53	54.887	ENSSPUG00000009820	-	64	55.701	Sphenodon_punctatus
ENSHGLG00000015883	SAFB	100	89.714	ENSSSCG00000013522	SAFB	99	90.302	Sus_scrofa
ENSHGLG00000015883	SAFB	96	62.706	ENSTGUG00000000502	-	97	63.605	Taeniopygia_guttata
ENSHGLG00000015883	SAFB	90	40.643	ENSTRUG00000003567	safb	64	39.159	Takifugu_rubripes
ENSHGLG00000015883	SAFB	88	44.458	ENSTNIG00000015470	safb	73	41.167	Tetraodon_nigroviridis
ENSHGLG00000015883	SAFB	75	86.364	ENSTBEG00000013124	-	74	90.909	Tupaia_belangeri
ENSHGLG00000015883	SAFB	92	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSHGLG00000015883	SAFB	79	87.973	ENSUAMG00000024543	SAFB	94	87.399	Ursus_americanus
ENSHGLG00000015883	SAFB	89	87.879	ENSUMAG00000009734	SAFB	96	87.917	Ursus_maritimus
ENSHGLG00000015883	SAFB	72	94.531	ENSVPAG00000012043	SAFB	79	94.531	Vicugna_pacos
ENSHGLG00000015883	SAFB	100	90.899	ENSVVUG00000013720	SAFB	87	90.899	Vulpes_vulpes
ENSHGLG00000015883	SAFB	66	49.518	ENSXETG00000008755	safb	64	69.318	Xenopus_tropicalis
ENSHGLG00000015883	SAFB	77	44.785	ENSXMAG00000003458	safb	55	47.766	Xiphophorus_maculatus