EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000015972 (Gene tree)
Gene ID: -
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 9875 bases
Position: chrJH602214.1:650202-660076
Accession: 101723979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000022396	zf-CCCH	PF00642.24	5.2e-06	1	1
ENSHGLP00000022395	zf-CCCH	PF00642.24	6.2e-06	1	1
ENSHGLP00000022395	TRM	PF02005.16	1.8e-147	1	1
ENSHGLP00000022396	TRM	PF02005.16	1.1e-138	1	1
ENSHGLP00000022396	Met_10	PF02475.16	7.8e-07	1	1
ENSHGLP00000022395	Met_10	PF02475.16	9.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000022607	TRMT1-202	1761	-	ENSHGLP00000022396	586 (aa)	-	-
ENSHGLT00000022606	TRMT1-201	2604	XM_004872423	ENSHGLP00000022395	657 (aa)	XP_004872480	UPI00034FC08E

Gene Model

Click here to download ENSHGLG00000015972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000015972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000015972	TRMT1	97	86.271	ENSG00000104907	TRMT1	100	93.717	Homo_sapiens
ENSHGLG00000015972	TRMT1	99	83.587	ENSAMEG00000012598	TRMT1	98	83.587	Ailuropoda_melanoleuca
ENSHGLG00000015972	TRMT1	90	57.479	ENSACIG00000018680	trmt1	92	57.479	Amphilophus_citrinellus
ENSHGLG00000015972	TRMT1	91	64.286	ENSAOCG00000006781	trmt1	89	64.286	Amphiprion_ocellaris
ENSHGLG00000015972	TRMT1	91	64.500	ENSAPEG00000007712	trmt1	89	64.500	Amphiprion_percula
ENSHGLG00000015972	TRMT1	87	67.535	ENSATEG00000001872	trmt1	84	67.535	Anabas_testudineus
ENSHGLG00000015972	TRMT1	88	67.591	ENSACAG00000003825	TRMT1	93	67.591	Anolis_carolinensis
ENSHGLG00000015972	TRMT1	99	80.851	ENSANAG00000023016	TRMT1	99	83.119	Aotus_nancymaae
ENSHGLG00000015972	TRMT1	87	64.161	ENSACLG00000010073	trmt1	92	64.161	Astatotilapia_calliptera
ENSHGLG00000015972	TRMT1	87	66.551	ENSAMXG00000012026	trmt1	85	66.551	Astyanax_mexicanus
ENSHGLG00000015972	TRMT1	99	82.523	ENSBTAG00000019325	TRMT1	94	82.523	Bos_taurus
ENSHGLG00000015972	TRMT1	82	39.927	WBGene00006613	trm-1	97	39.927	Caenorhabditis_elegans
ENSHGLG00000015972	TRMT1	98	81.748	ENSCJAG00000004566	TRMT1	99	81.748	Callithrix_jacchus
ENSHGLG00000015972	TRMT1	99	85.015	ENSCAFG00000017070	TRMT1	99	85.150	Canis_familiaris
ENSHGLG00000015972	TRMT1	99	84.509	ENSCAFG00020005397	TRMT1	99	81.307	Canis_lupus_dingo
ENSHGLG00000015972	TRMT1	99	82.701	ENSCHIG00000013569	TRMT1	99	82.701	Capra_hircus
ENSHGLG00000015972	TRMT1	97	80.438	ENSTSYG00000003207	TRMT1	99	80.092	Carlito_syrichta
ENSHGLG00000015972	TRMT1	85	82.888	ENSCAPG00000003355	TRMT1	99	82.888	Cavia_aperea
ENSHGLG00000015972	TRMT1	99	85.627	ENSCPOG00000011754	TRMT1	99	85.627	Cavia_porcellus
ENSHGLG00000015972	TRMT1	94	82.903	ENSCCAG00000022263	TRMT1	99	82.903	Cebus_capucinus
ENSHGLG00000015972	TRMT1	92	64.098	ENSCATG00000038220	-	97	71.698	Cercocebus_atys
ENSHGLG00000015972	TRMT1	99	85.758	ENSCATG00000039850	TRMT1	99	85.758	Cercocebus_atys
ENSHGLG00000015972	TRMT1	98	92.415	ENSCLAG00000015295	TRMT1	96	92.415	Chinchilla_lanigera
ENSHGLG00000015972	TRMT1	85	82.798	ENSCSAG00000006500	TRMT1	100	86.792	Chlorocebus_sabaeus
ENSHGLG00000015972	TRMT1	95	65.102	ENSCPBG00000023866	TRMT1	94	65.258	Chrysemys_picta_bellii
ENSHGLG00000015972	TRMT1	84	45.375	ENSCING00000002884	-	98	45.375	Ciona_intestinalis
ENSHGLG00000015972	TRMT1	83	44.604	ENSCSAVG00000010927	-	100	45.539	Ciona_savignyi
ENSHGLG00000015972	TRMT1	95	65.710	ENSCANG00000031650	-	97	65.566	Colobus_angolensis_palliatus
ENSHGLG00000015972	TRMT1	98	68.837	ENSCANG00000040631	TRMT1	98	68.837	Colobus_angolensis_palliatus
ENSHGLG00000015972	TRMT1	99	81.510	ENSCGRG00001022594	Trmt1	98	81.510	Cricetulus_griseus_chok1gshd
ENSHGLG00000015972	TRMT1	99	81.510	ENSCGRG00000017732	Trmt1	98	81.510	Cricetulus_griseus_crigri
ENSHGLG00000015972	TRMT1	87	64.799	ENSCSEG00000001643	trmt1	84	66.926	Cynoglossus_semilaevis
ENSHGLG00000015972	TRMT1	87	66.958	ENSCVAG00000011886	trmt1	86	66.958	Cyprinodon_variegatus
ENSHGLG00000015972	TRMT1	87	64.828	ENSDARG00000010978	trmt1	85	64.948	Danio_rerio
ENSHGLG00000015972	TRMT1	83	58.228	ENSDNOG00000048240	-	94	58.228	Dasypus_novemcinctus
ENSHGLG00000015972	TRMT1	99	80.551	ENSDORG00000014298	Trmt1	99	80.551	Dipodomys_ordii
ENSHGLG00000015972	TRMT1	82	46.715	FBgn0032430	CG6388	92	46.715	Drosophila_melanogaster
ENSHGLG00000015972	TRMT1	61	80.345	ENSETEG00000015483	-	54	80.345	Echinops_telfairi
ENSHGLG00000015972	TRMT1	81	52.542	ENSEBUG00000003449	trmt1	76	52.290	Eptatretus_burgeri
ENSHGLG00000015972	TRMT1	95	83.654	ENSEASG00005004050	TRMT1	99	83.254	Equus_asinus_asinus
ENSHGLG00000015972	TRMT1	95	83.974	ENSECAG00000016149	TRMT1	99	83.570	Equus_caballus
ENSHGLG00000015972	TRMT1	60	70.202	ENSEEUG00000014102	-	100	70.202	Erinaceus_europaeus
ENSHGLG00000015972	TRMT1	87	65.157	ENSELUG00000021659	trmt1	85	65.157	Esox_lucius
ENSHGLG00000015972	TRMT1	98	84.923	ENSFCAG00000000483	TRMT1	99	84.923	Felis_catus
ENSHGLG00000015972	TRMT1	99	91.212	ENSFDAG00000007386	TRMT1	100	91.212	Fukomys_damarensis
ENSHGLG00000015972	TRMT1	82	67.963	ENSFHEG00000012865	trmt1	90	67.593	Fundulus_heteroclitus
ENSHGLG00000015972	TRMT1	87	60.245	ENSGMOG00000006564	trmt1	98	60.245	Gadus_morhua
ENSHGLG00000015972	TRMT1	90	65.101	ENSGAFG00000011862	trmt1	92	65.327	Gambusia_affinis
ENSHGLG00000015972	TRMT1	94	59.776	ENSGACG00000000227	trmt1	99	60.064	Gasterosteus_aculeatus
ENSHGLG00000015972	TRMT1	96	64.706	ENSGAGG00000016432	TRMT1	94	64.706	Gopherus_agassizii
ENSHGLG00000015972	TRMT1	97	86.583	ENSGGOG00000014007	TRMT1	99	86.154	Gorilla_gorilla
ENSHGLG00000015972	TRMT1	85	58.244	ENSHBUG00000008821	trmt1	92	58.244	Haplochromis_burtoni
ENSHGLG00000015972	TRMT1	100	99.829	ENSHGLG00100018112	TRMT1	100	99.829	Heterocephalus_glaber_male
ENSHGLG00000015972	TRMT1	87	63.573	ENSHCOG00000009447	trmt1	88	63.573	Hippocampus_comes
ENSHGLG00000015972	TRMT1	88	65.430	ENSIPUG00000002899	trmt1	86	65.488	Ictalurus_punctatus
ENSHGLG00000015972	TRMT1	99	84.195	ENSSTOG00000012531	TRMT1	99	84.195	Ictidomys_tridecemlineatus
ENSHGLG00000015972	TRMT1	95	81.369	ENSJJAG00000017154	Trmt1	99	79.331	Jaculus_jaculus
ENSHGLG00000015972	TRMT1	89	66.214	ENSKMAG00000011809	trmt1	95	65.499	Kryptolebias_marmoratus
ENSHGLG00000015972	TRMT1	87	65.909	ENSLBEG00000012703	trmt1	84	65.909	Labrus_bergylta
ENSHGLG00000015972	TRMT1	87	57.243	ENSLACG00000014585	TRMT1	96	56.367	Latimeria_chalumnae
ENSHGLG00000015972	TRMT1	87	62.176	ENSLOCG00000006479	trmt1	97	62.176	Lepisosteus_oculatus
ENSHGLG00000015972	TRMT1	98	84.627	ENSLAFG00000014072	TRMT1	99	84.627	Loxodonta_africana
ENSHGLG00000015972	TRMT1	99	85.758	ENSMFAG00000033143	TRMT1	99	85.758	Macaca_fascicularis
ENSHGLG00000015972	TRMT1	98	79.167	ENSMMUG00000001167	TRMT1	99	79.167	Macaca_mulatta
ENSHGLG00000015972	TRMT1	99	85.758	ENSMNEG00000037867	TRMT1	99	85.758	Macaca_nemestrina
ENSHGLG00000015972	TRMT1	98	85.294	ENSMLEG00000016142	TRMT1	98	85.294	Mandrillus_leucophaeus
ENSHGLG00000015972	TRMT1	94	63.434	ENSMAMG00000004357	trmt1	94	63.434	Mastacembelus_armatus
ENSHGLG00000015972	TRMT1	93	60.925	ENSMZEG00005014510	trmt1	94	60.925	Maylandia_zebra
ENSHGLG00000015972	TRMT1	98	81.413	ENSMAUG00000011134	Trmt1	98	81.413	Mesocricetus_auratus
ENSHGLG00000015972	TRMT1	99	85.562	ENSMICG00000000793	TRMT1	99	85.562	Microcebus_murinus
ENSHGLG00000015972	TRMT1	99	81.874	ENSMOCG00000015895	Trmt1	98	81.902	Microtus_ochrogaster
ENSHGLG00000015972	TRMT1	87	65.674	ENSMMOG00000011097	trmt1	92	65.674	Mola_mola
ENSHGLG00000015972	TRMT1	94	73.096	ENSMODG00000011619	TRMT1	99	73.096	Monodelphis_domestica
ENSHGLG00000015972	TRMT1	99	81.288	MGP_CAROLIEiJ_G0031304	Trmt1	100	81.749	Mus_caroli
ENSHGLG00000015972	TRMT1	99	81.288	ENSMUSG00000001909	Trmt1	100	81.369	Mus_musculus
ENSHGLG00000015972	TRMT1	99	80.982	MGP_SPRETEiJ_G0032422	Trmt1	100	80.989	Mus_spretus
ENSHGLG00000015972	TRMT1	99	84.098	ENSMPUG00000004210	TRMT1	94	84.098	Mustela_putorius_furo
ENSHGLG00000015972	TRMT1	99	83.131	ENSMLUG00000012809	TRMT1	98	83.131	Myotis_lucifugus
ENSHGLG00000015972	TRMT1	99	79.542	ENSNGAG00000022486	Trmt1	98	79.542	Nannospalax_galili
ENSHGLG00000015972	TRMT1	75	68.955	ENSNBRG00000024376	trmt1	85	68.955	Neolamprologus_brichardi
ENSHGLG00000015972	TRMT1	81	85.672	ENSNLEG00000013019	-	98	85.672	Nomascus_leucogenys
ENSHGLG00000015972	TRMT1	88	75.652	ENSMEUG00000013756	TRMT1	97	75.652	Notamacropus_eugenii
ENSHGLG00000015972	TRMT1	81	84.091	ENSOPRG00000009471	-	81	84.091	Ochotona_princeps
ENSHGLG00000015972	TRMT1	100	90.107	ENSODEG00000010323	TRMT1	100	90.107	Octodon_degus
ENSHGLG00000015972	TRMT1	94	63.607	ENSONIG00000000400	trmt1	99	63.607	Oreochromis_niloticus
ENSHGLG00000015972	TRMT1	80	86.286	ENSOCUG00000021934	TRMT1	99	86.286	Oryctolagus_cuniculus
ENSHGLG00000015972	TRMT1	87	61.391	ENSORLG00000020074	trmt1	90	61.063	Oryzias_latipes
ENSHGLG00000015972	TRMT1	87	64.747	ENSORLG00020007561	trmt1	89	64.572	Oryzias_latipes_hni
ENSHGLG00000015972	TRMT1	90	63.636	ENSORLG00015006547	trmt1	89	63.636	Oryzias_latipes_hsok
ENSHGLG00000015972	TRMT1	90	63.289	ENSOMEG00000019343	trmt1	91	63.289	Oryzias_melastigma
ENSHGLG00000015972	TRMT1	93	84.176	ENSOGAG00000025576	TRMT1	96	84.176	Otolemur_garnettii
ENSHGLG00000015972	TRMT1	99	68.127	ENSOARG00000009397	TRMT1	92	68.807	Ovis_aries
ENSHGLG00000015972	TRMT1	98	69.952	ENSPPRG00000012117	TRMT1	99	76.480	Panthera_pardus
ENSHGLG00000015972	TRMT1	78	86.405	ENSPTIG00000008833	TRMT1	96	86.405	Panthera_tigris_altaica
ENSHGLG00000015972	TRMT1	97	86.427	ENSPTRG00000010557	TRMT1	99	86.000	Pan_troglodytes
ENSHGLG00000015972	TRMT1	98	63.777	ENSPTRG00000050421	-	99	63.777	Pan_troglodytes
ENSHGLG00000015972	TRMT1	93	63.415	ENSPANG00000034058	-	95	63.415	Papio_anubis
ENSHGLG00000015972	TRMT1	98	85.648	ENSPANG00000009247	TRMT1	98	85.648	Papio_anubis
ENSHGLG00000015972	TRMT1	87	67.776	ENSPKIG00000005309	trmt1	84	67.776	Paramormyrops_kingsleyae
ENSHGLG00000015972	TRMT1	92	56.579	ENSPSIG00000008762	TRMT1	86	56.579	Pelodiscus_sinensis
ENSHGLG00000015972	TRMT1	87	65.149	ENSPMGG00000019764	trmt1	90	65.149	Periophthalmus_magnuspinnatus
ENSHGLG00000015972	TRMT1	98	83.437	ENSPEMG00000016247	Trmt1	98	82.975	Peromyscus_maniculatus_bairdii
ENSHGLG00000015972	TRMT1	89	59.622	ENSPMAG00000004329	trmt1	91	59.622	Petromyzon_marinus
ENSHGLG00000015972	TRMT1	97	71.473	ENSPCIG00000019273	TRMT1	99	71.473	Phascolarctos_cinereus
ENSHGLG00000015972	TRMT1	90	66.555	ENSPFOG00000008527	trmt1	92	66.555	Poecilia_formosa
ENSHGLG00000015972	TRMT1	90	66.555	ENSPLAG00000018788	trmt1	92	68.566	Poecilia_latipinna
ENSHGLG00000015972	TRMT1	90	66.388	ENSPMEG00000013120	trmt1	92	66.388	Poecilia_mexicana
ENSHGLG00000015972	TRMT1	92	64.098	ENSPREG00000000211	trmt1	91	64.262	Poecilia_reticulata
ENSHGLG00000015972	TRMT1	97	86.271	ENSPPYG00000009622	TRMT1	99	85.846	Pongo_abelii
ENSHGLG00000015972	TRMT1	98	77.607	ENSPCAG00000003698	TRMT1	99	77.607	Procavia_capensis
ENSHGLG00000015972	TRMT1	98	85.759	ENSPCOG00000008653	TRMT1	98	85.759	Propithecus_coquereli
ENSHGLG00000015972	TRMT1	99	84.332	ENSPVAG00000015076	TRMT1	99	84.332	Pteropus_vampyrus
ENSHGLG00000015972	TRMT1	87	63.462	ENSPNYG00000013960	trmt1	92	63.462	Pundamilia_nyererei
ENSHGLG00000015972	TRMT1	81	68.894	ENSPNAG00000024859	trmt1	88	68.894	Pygocentrus_nattereri
ENSHGLG00000015972	TRMT1	95	81.629	ENSRNOG00000002914	Trmt1	98	81.629	Rattus_norvegicus
ENSHGLG00000015972	TRMT1	99	85.145	ENSRBIG00000038324	TRMT1	99	85.145	Rhinopithecus_bieti
ENSHGLG00000015972	TRMT1	95	66.137	ENSRBIG00000037505	-	98	65.987	Rhinopithecus_bieti
ENSHGLG00000015972	TRMT1	95	65.342	ENSRROG00000031847	-	97	65.204	Rhinopithecus_roxellana
ENSHGLG00000015972	TRMT1	99	85.299	ENSRROG00000028599	TRMT1	99	85.299	Rhinopithecus_roxellana
ENSHGLG00000015972	TRMT1	78	37.153	YDR120C	-	92	37.153	Saccharomyces_cerevisiae
ENSHGLG00000015972	TRMT1	97	81.435	ENSSBOG00000028861	TRMT1	99	83.065	Saimiri_boliviensis_boliviensis
ENSHGLG00000015972	TRMT1	87	77.018	ENSSHAG00000014381	TRMT1	98	74.013	Sarcophilus_harrisii
ENSHGLG00000015972	TRMT1	90	65.144	ENSSFOG00015004139	trmt1	86	65.144	Scleropages_formosus
ENSHGLG00000015972	TRMT1	87	67.304	ENSSMAG00000021136	trmt1	85	67.304	Scophthalmus_maximus
ENSHGLG00000015972	TRMT1	89	65.482	ENSSDUG00000012740	trmt1	87	65.482	Seriola_dumerili
ENSHGLG00000015972	TRMT1	89	65.144	ENSSLDG00000005971	trmt1	87	65.144	Seriola_lalandi_dorsalis
ENSHGLG00000015972	TRMT1	86	80.986	ENSSARG00000005138	TRMT1	100	80.986	Sorex_araneus
ENSHGLG00000015972	TRMT1	87	54.340	ENSSPUG00000001084	TRMT1	89	54.783	Sphenodon_punctatus
ENSHGLG00000015972	TRMT1	91	62.957	ENSSPAG00000007153	trmt1	98	62.833	Stegastes_partitus
ENSHGLG00000015972	TRMT1	96	84.543	ENSSSCG00000013744	TRMT1	99	84.543	Sus_scrofa
ENSHGLG00000015972	TRMT1	86	62.435	ENSTRUG00000010700	trmt1	86	62.783	Takifugu_rubripes
ENSHGLG00000015972	TRMT1	87	65.559	ENSTNIG00000018808	trmt1	98	65.559	Tetraodon_nigroviridis
ENSHGLG00000015972	TRMT1	97	81.464	ENSTTRG00000006379	TRMT1	99	81.346	Tursiops_truncatus
ENSHGLG00000015972	TRMT1	98	83.926	ENSUAMG00000022911	TRMT1	99	83.926	Ursus_americanus
ENSHGLG00000015972	TRMT1	96	83.728	ENSUMAG00000006027	TRMT1	99	83.728	Ursus_maritimus
ENSHGLG00000015972	TRMT1	99	84.347	ENSVVUG00000024177	TRMT1	99	84.347	Vulpes_vulpes
ENSHGLG00000015972	TRMT1	71	69.612	ENSXETG00000033863	TRMT1	92	69.612	Xenopus_tropicalis
ENSHGLG00000015972	TRMT1	90	65.494	ENSXCOG00000015733	trmt1	92	65.719	Xiphophorus_couchianus
ENSHGLG00000015972	TRMT1	87	67.250	ENSXMAG00000013823	trmt1	97	67.483	Xiphophorus_maculatus