EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000016078 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 15231 bases
Position: chrJH602059.1:28151208-28166438
Accession: 101718640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000022543	HVSL	PF09749.9	1.5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000022757	USB1-201	2629	XM_004843136	ENSHGLP00000022543	273 (aa)	XP_004843193	UPI0003500C98

Gene Model

Click here to download ENSHGLG00000016078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000016078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000016078	USB1	98	85.019	ENSG00000103005	USB1	100	87.383	Homo_sapiens
ENSHGLG00000016078	USB1	96	46.043	ENSAPOG00000011942	usb1	99	46.043	Acanthochromis_polyacanthus
ENSHGLG00000016078	USB1	98	82.156	ENSAMEG00000017205	USB1	100	82.900	Ailuropoda_melanoleuca
ENSHGLG00000016078	USB1	82	53.812	ENSACIG00000012234	usb1	99	50.186	Amphilophus_citrinellus
ENSHGLG00000016078	USB1	83	52.655	ENSAOCG00000014831	usb1	99	47.500	Amphiprion_ocellaris
ENSHGLG00000016078	USB1	83	53.097	ENSAPEG00000000296	usb1	99	47.857	Amphiprion_percula
ENSHGLG00000016078	USB1	85	52.381	ENSATEG00000009348	usb1	99	48.754	Anabas_testudineus
ENSHGLG00000016078	USB1	82	69.333	ENSAPLG00000002756	USB1	100	69.027	Anas_platyrhynchos
ENSHGLG00000016078	USB1	83	63.755	ENSACAG00000015481	USB1	100	63.755	Anolis_carolinensis
ENSHGLG00000016078	USB1	98	83.895	ENSANAG00000035640	USB1	100	83.895	Aotus_nancymaae
ENSHGLG00000016078	USB1	82	53.363	ENSACLG00000020586	usb1	99	48.029	Astatotilapia_calliptera
ENSHGLG00000016078	USB1	82	50.673	ENSAMXG00000040146	usb1	95	45.296	Astyanax_mexicanus
ENSHGLG00000016078	USB1	98	83.895	ENSBTAG00000015758	USB1	100	83.895	Bos_taurus
ENSHGLG00000016078	USB1	98	85.019	ENSCJAG00000011733	USB1	100	85.019	Callithrix_jacchus
ENSHGLG00000016078	USB1	97	81.250	ENSCAFG00000008556	USB1	73	82.353	Canis_familiaris
ENSHGLG00000016078	USB1	97	82.331	ENSCAFG00020009263	USB1	99	82.331	Canis_lupus_dingo
ENSHGLG00000016078	USB1	98	82.772	ENSCHIG00000024290	USB1	100	82.772	Capra_hircus
ENSHGLG00000016078	USB1	98	85.019	ENSTSYG00000006997	USB1	100	85.019	Carlito_syrichta
ENSHGLG00000016078	USB1	85	75.431	ENSCAPG00000009057	USB1	100	75.431	Cavia_aperea
ENSHGLG00000016078	USB1	98	88.060	ENSCPOG00000014325	USB1	100	88.060	Cavia_porcellus
ENSHGLG00000016078	USB1	98	84.644	ENSCCAG00000022132	USB1	100	84.644	Cebus_capucinus
ENSHGLG00000016078	USB1	98	86.142	ENSCATG00000032174	USB1	100	86.891	Cercocebus_atys
ENSHGLG00000016078	USB1	64	92.614	ENSCLAG00000007363	USB1	100	92.614	Chinchilla_lanigera
ENSHGLG00000016078	USB1	98	86.142	ENSCSAG00000004783	USB1	100	86.891	Chlorocebus_sabaeus
ENSHGLG00000016078	USB1	89	66.255	ENSCPBG00000026943	USB1	99	63.309	Chrysemys_picta_bellii
ENSHGLG00000016078	USB1	98	84.644	ENSCANG00000037135	USB1	100	85.393	Colobus_angolensis_palliatus
ENSHGLG00000016078	USB1	98	83.955	ENSCGRG00001011243	USB1	100	83.955	Cricetulus_griseus_chok1gshd
ENSHGLG00000016078	USB1	98	83.955	ENSCGRG00000013252	USB1	100	83.955	Cricetulus_griseus_crigri
ENSHGLG00000016078	USB1	96	47.253	ENSCSEG00000013881	usb1	99	47.253	Cynoglossus_semilaevis
ENSHGLG00000016078	USB1	82	48.684	ENSCVAG00000009252	usb1	97	49.123	Cyprinodon_variegatus
ENSHGLG00000016078	USB1	85	48.927	ENSDARG00000003841	usb1	99	45.255	Danio_rerio
ENSHGLG00000016078	USB1	98	79.401	ENSDORG00000001888	Usb1	100	80.524	Dipodomys_ordii
ENSHGLG00000016078	USB1	75	39.048	FBgn0037713	CG16790	78	39.048	Drosophila_melanogaster
ENSHGLG00000016078	USB1	98	68.165	ENSETEG00000019682	USB1	100	68.165	Echinops_telfairi
ENSHGLG00000016078	USB1	82	48.879	ENSEBUG00000005889	usb1	78	48.879	Eptatretus_burgeri
ENSHGLG00000016078	USB1	98	85.393	ENSEASG00005005484	USB1	100	85.393	Equus_asinus_asinus
ENSHGLG00000016078	USB1	100	86.813	ENSECAG00000019493	USB1	93	86.813	Equus_caballus
ENSHGLG00000016078	USB1	64	80.114	ENSEEUG00000000154	USB1	100	61.798	Erinaceus_europaeus
ENSHGLG00000016078	USB1	83	48.458	ENSELUG00000010974	usb1	99	43.911	Esox_lucius
ENSHGLG00000016078	USB1	98	85.393	ENSFCAG00000002693	USB1	100	85.393	Felis_catus
ENSHGLG00000016078	USB1	98	60.300	ENSFALG00000006876	USB1	99	60.300	Ficedula_albicollis
ENSHGLG00000016078	USB1	98	94.757	ENSFDAG00000010052	USB1	100	94.757	Fukomys_damarensis
ENSHGLG00000016078	USB1	84	46.281	ENSFHEG00000012334	usb1	96	46.694	Fundulus_heteroclitus
ENSHGLG00000016078	USB1	82	50.673	ENSGMOG00000004228	usb1	99	50.673	Gadus_morhua
ENSHGLG00000016078	USB1	82	66.071	ENSGALG00000035604	USB1	100	62.687	Gallus_gallus
ENSHGLG00000016078	USB1	96	46.831	ENSGAFG00000021890	usb1	99	46.831	Gambusia_affinis
ENSHGLG00000016078	USB1	82	52.018	ENSGACG00000003257	usb1	99	48.551	Gasterosteus_aculeatus
ENSHGLG00000016078	USB1	97	64.103	ENSGAGG00000022572	USB1	99	64.103	Gopherus_agassizii
ENSHGLG00000016078	USB1	98	85.393	ENSGGOG00000017147	USB1	100	85.393	Gorilla_gorilla
ENSHGLG00000016078	USB1	83	53.540	ENSHBUG00000009823	usb1	99	48.921	Haplochromis_burtoni
ENSHGLG00000016078	USB1	100	100.000	ENSHGLG00100005562	USB1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000016078	USB1	79	53.456	ENSHCOG00000015633	usb1	99	50.000	Hippocampus_comes
ENSHGLG00000016078	USB1	96	47.038	ENSIPUG00000008601	usb1	99	47.038	Ictalurus_punctatus
ENSHGLG00000016078	USB1	98	83.883	ENSSTOG00000007548	USB1	100	84.249	Ictidomys_tridecemlineatus
ENSHGLG00000016078	USB1	98	85.393	ENSJJAG00000021859	Usb1	100	85.393	Jaculus_jaculus
ENSHGLG00000016078	USB1	92	48.617	ENSKMAG00000007200	usb1	98	47.312	Kryptolebias_marmoratus
ENSHGLG00000016078	USB1	84	47.807	ENSLBEG00000008452	usb1	88	43.617	Labrus_bergylta
ENSHGLG00000016078	USB1	82	56.140	ENSLACG00000000105	USB1	98	51.064	Latimeria_chalumnae
ENSHGLG00000016078	USB1	93	50.196	ENSLOCG00000000465	usb1	99	49.291	Lepisosteus_oculatus
ENSHGLG00000016078	USB1	98	65.809	ENSLAFG00000002267	USB1	100	66.176	Loxodonta_africana
ENSHGLG00000016078	USB1	98	86.142	ENSMFAG00000003926	USB1	100	86.891	Macaca_fascicularis
ENSHGLG00000016078	USB1	98	86.142	ENSMMUG00000022669	USB1	100	86.891	Macaca_mulatta
ENSHGLG00000016078	USB1	98	85.768	ENSMNEG00000042487	USB1	100	86.517	Macaca_nemestrina
ENSHGLG00000016078	USB1	98	86.142	ENSMLEG00000028756	USB1	100	86.891	Mandrillus_leucophaeus
ENSHGLG00000016078	USB1	96	49.097	ENSMAMG00000015092	usb1	99	49.097	Mastacembelus_armatus
ENSHGLG00000016078	USB1	82	53.363	ENSMZEG00005010008	usb1	99	48.921	Maylandia_zebra
ENSHGLG00000016078	USB1	98	82.397	ENSMAUG00000007832	Usb1	100	82.397	Mesocricetus_auratus
ENSHGLG00000016078	USB1	98	84.644	ENSMICG00000004900	USB1	100	85.768	Microcebus_murinus
ENSHGLG00000016078	USB1	98	82.463	ENSMOCG00000022647	Usb1	100	82.463	Microtus_ochrogaster
ENSHGLG00000016078	USB1	84	50.877	ENSMMOG00000000490	usb1	99	50.382	Mola_mola
ENSHGLG00000016078	USB1	98	68.148	ENSMODG00000014067	USB1	100	69.259	Monodelphis_domestica
ENSHGLG00000016078	USB1	83	53.097	ENSMALG00000005930	usb1	99	48.214	Monopterus_albus
ENSHGLG00000016078	USB1	98	82.397	MGP_CAROLIEiJ_G0031421	Usb1	100	83.186	Mus_caroli
ENSHGLG00000016078	USB1	98	82.397	ENSMUSG00000031792	Usb1	100	83.186	Mus_musculus
ENSHGLG00000016078	USB1	98	82.022	MGP_PahariEiJ_G0023019	Usb1	100	82.906	Mus_pahari
ENSHGLG00000016078	USB1	98	81.648	MGP_SPRETEiJ_G0032540	Usb1	100	81.648	Mus_spretus
ENSHGLG00000016078	USB1	99	79.779	ENSMPUG00000004684	USB1	97	80.515	Mustela_putorius_furo
ENSHGLG00000016078	USB1	85	88.745	ENSMLUG00000007400	USB1	100	88.745	Myotis_lucifugus
ENSHGLG00000016078	USB1	98	83.271	ENSNGAG00000009703	Usb1	100	84.015	Nannospalax_galili
ENSHGLG00000016078	USB1	85	47.845	ENSNBRG00000008747	usb1	99	52.582	Neolamprologus_brichardi
ENSHGLG00000016078	USB1	92	85.317	ENSNLEG00000003340	USB1	100	85.317	Nomascus_leucogenys
ENSHGLG00000016078	USB1	55	62.179	ENSMEUG00000003328	-	100	62.179	Notamacropus_eugenii
ENSHGLG00000016078	USB1	62	88.235	ENSOPRG00000011803	USB1	72	88.235	Ochotona_princeps
ENSHGLG00000016078	USB1	98	86.142	ENSODEG00000016214	USB1	100	86.142	Octodon_degus
ENSHGLG00000016078	USB1	96	47.653	ENSONIG00000011063	usb1	99	47.653	Oreochromis_niloticus
ENSHGLG00000016078	USB1	82	71.556	ENSOANG00000012118	USB1	94	71.556	Ornithorhynchus_anatinus
ENSHGLG00000016078	USB1	82	50.224	ENSORLG00000012479	usb1	99	46.494	Oryzias_latipes
ENSHGLG00000016078	USB1	82	50.224	ENSORLG00020018671	usb1	99	46.691	Oryzias_latipes_hni
ENSHGLG00000016078	USB1	82	50.224	ENSORLG00015009679	usb1	99	47.426	Oryzias_latipes_hsok
ENSHGLG00000016078	USB1	82	50.224	ENSOMEG00000012930	usb1	99	46.350	Oryzias_melastigma
ENSHGLG00000016078	USB1	98	79.775	ENSOGAG00000003273	USB1	100	79.775	Otolemur_garnettii
ENSHGLG00000016078	USB1	89	83.607	ENSOARG00000001107	USB1	93	83.607	Ovis_aries
ENSHGLG00000016078	USB1	98	85.393	ENSPPAG00000042137	USB1	100	85.393	Pan_paniscus
ENSHGLG00000016078	USB1	98	85.019	ENSPPRG00000024797	USB1	100	85.019	Panthera_pardus
ENSHGLG00000016078	USB1	98	85.019	ENSPTIG00000007506	USB1	100	85.019	Panthera_tigris_altaica
ENSHGLG00000016078	USB1	98	78.652	ENSPTRG00000008172	USB1	100	88.318	Pan_troglodytes
ENSHGLG00000016078	USB1	98	86.142	ENSPANG00000025138	USB1	100	86.891	Papio_anubis
ENSHGLG00000016078	USB1	94	49.225	ENSPKIG00000015109	usb1	99	46.780	Paramormyrops_kingsleyae
ENSHGLG00000016078	USB1	82	52.212	ENSPSIG00000004305	USB1	100	52.212	Pelodiscus_sinensis
ENSHGLG00000016078	USB1	82	51.786	ENSPMGG00000017725	usb1	98	48.092	Periophthalmus_magnuspinnatus
ENSHGLG00000016078	USB1	98	81.985	ENSPEMG00000016183	Usb1	100	81.985	Peromyscus_maniculatus_bairdii
ENSHGLG00000016078	USB1	86	50.000	ENSPMAG00000000462	usb1	99	50.000	Petromyzon_marinus
ENSHGLG00000016078	USB1	96	46.739	ENSPFOG00000011130	usb1	99	46.739	Poecilia_formosa
ENSHGLG00000016078	USB1	96	46.739	ENSPLAG00000009820	usb1	99	46.739	Poecilia_latipinna
ENSHGLG00000016078	USB1	96	47.101	ENSPMEG00000006402	usb1	99	47.101	Poecilia_mexicana
ENSHGLG00000016078	USB1	84	47.521	ENSPREG00000001047	usb1	98	48.347	Poecilia_reticulata
ENSHGLG00000016078	USB1	93	82.283	ENSPPYG00000007401	USB1	100	82.283	Pongo_abelii
ENSHGLG00000016078	USB1	98	86.517	ENSPCOG00000022612	USB1	100	86.517	Propithecus_coquereli
ENSHGLG00000016078	USB1	98	82.022	ENSPVAG00000004613	USB1	100	82.022	Pteropus_vampyrus
ENSHGLG00000016078	USB1	83	53.540	ENSPNYG00000022262	usb1	99	48.921	Pundamilia_nyererei
ENSHGLG00000016078	USB1	82	51.570	ENSPNAG00000011736	usb1	99	44.521	Pygocentrus_nattereri
ENSHGLG00000016078	USB1	98	83.521	ENSRNOG00000013216	Usb1	100	83.521	Rattus_norvegicus
ENSHGLG00000016078	USB1	98	79.401	ENSRBIG00000044466	USB1	100	89.252	Rhinopithecus_bieti
ENSHGLG00000016078	USB1	98	85.768	ENSRROG00000029211	USB1	100	86.517	Rhinopithecus_roxellana
ENSHGLG00000016078	USB1	98	84.270	ENSSBOG00000029362	USB1	100	84.270	Saimiri_boliviensis_boliviensis
ENSHGLG00000016078	USB1	80	74.429	ENSSHAG00000006993	USB1	100	68.627	Sarcophilus_harrisii
ENSHGLG00000016078	USB1	85	55.603	ENSSFOG00015023663	usb1	73	55.603	Scleropages_formosus
ENSHGLG00000016078	USB1	95	48.727	ENSSMAG00000015834	usb1	99	47.279	Scophthalmus_maximus
ENSHGLG00000016078	USB1	82	55.157	ENSSDUG00000002949	usb1	99	50.562	Seriola_dumerili
ENSHGLG00000016078	USB1	82	55.157	ENSSLDG00000014174	usb1	99	49.640	Seriola_lalandi_dorsalis
ENSHGLG00000016078	USB1	78	65.421	ENSSPUG00000006741	USB1	100	65.421	Sphenodon_punctatus
ENSHGLG00000016078	USB1	96	45.390	ENSSPAG00000007484	usb1	99	46.454	Stegastes_partitus
ENSHGLG00000016078	USB1	98	83.643	ENSSSCG00000002807	USB1	100	83.643	Sus_scrofa
ENSHGLG00000016078	USB1	78	67.925	ENSTGUG00000004792	USB1	99	63.296	Taeniopygia_guttata
ENSHGLG00000016078	USB1	96	47.584	ENSTRUG00000021069	usb1	99	47.584	Takifugu_rubripes
ENSHGLG00000016078	USB1	96	45.802	ENSTNIG00000000626	usb1	98	45.802	Tetraodon_nigroviridis
ENSHGLG00000016078	USB1	85	60.776	ENSTBEG00000001507	USB1	100	60.776	Tupaia_belangeri
ENSHGLG00000016078	USB1	98	81.413	ENSUAMG00000016823	USB1	100	82.156	Ursus_americanus
ENSHGLG00000016078	USB1	78	85.047	ENSUMAG00000021369	USB1	100	85.047	Ursus_maritimus
ENSHGLG00000016078	USB1	97	82.463	ENSVVUG00000023700	USB1	91	84.583	Vulpes_vulpes
ENSHGLG00000016078	USB1	79	55.963	ENSXETG00000013795	usb1	99	52.672	Xenopus_tropicalis
ENSHGLG00000016078	USB1	83	51.754	ENSXMAG00000024687	usb1	80	48.163	Xiphophorus_maculatus