EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000016569 (Gene tree)
Gene ID: -
Gene Symbol: PRPF3
Alias: -
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 29454 bases
Position: chrJH602085.1:18070970-18100423
Accession: 101720204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000023238	PRP3	PF08572.10	2e-79	1	1
ENSHGLP00000023239	PRP3	PF08572.10	2e-79	1	1
ENSHGLP00000023238	PWI	PF01480.17	3.1e-13	1	1
ENSHGLP00000023239	PWI	PF01480.17	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000023456	-	345	-	ENSHGLP00000023240	114 (aa)	-	-
ENSHGLT00000023455	-	5744	XM_004853969	ENSHGLP00000023239	683 (aa)	XP_004854026	G5BH37
ENSHGLT00000023454	-	5755	-	ENSHGLP00000023238	683 (aa)	XP_021121528	G5BH37

Gene Model

Click here to download ENSHGLG00000016569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000016569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000016569	PRPF3	100	70.278	ENSHGLG00000016033	-	100	70.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000016569	PRPF3	100	99.561	ENSG00000117360	PRPF3	100	99.561	Homo_sapiens
ENSHGLG00000016569	PRPF3	100	71.893	ENSAPOG00000015584	prpf3	99	72.458	Acanthochromis_polyacanthus
ENSHGLG00000016569	PRPF3	100	99.414	ENSAMEG00000001630	PRPF3	100	99.414	Ailuropoda_melanoleuca
ENSHGLG00000016569	PRPF3	100	72.136	ENSACIG00000007876	prpf3	99	71.146	Amphilophus_citrinellus
ENSHGLG00000016569	PRPF3	100	70.904	ENSAOCG00000011449	prpf3	99	72.119	Amphiprion_ocellaris
ENSHGLG00000016569	PRPF3	100	71.225	ENSATEG00000023583	prpf3	99	71.835	Anabas_testudineus
ENSHGLG00000016569	PRPF3	100	94.591	ENSAPLG00000002440	PRPF3	100	94.591	Anas_platyrhynchos
ENSHGLG00000016569	PRPF3	100	92.140	ENSACAG00000003176	PRPF3	100	92.431	Anolis_carolinensis
ENSHGLG00000016569	PRPF3	100	99.561	ENSANAG00000026138	PRPF3	100	99.561	Aotus_nancymaae
ENSHGLG00000016569	PRPF3	100	72.439	ENSACLG00000020127	prpf3	99	72.150	Astatotilapia_calliptera
ENSHGLG00000016569	PRPF3	100	73.944	ENSAMXG00000007306	prpf3	99	73.662	Astyanax_mexicanus
ENSHGLG00000016569	PRPF3	100	99.561	ENSBTAG00000013946	PRPF3	100	99.561	Bos_taurus
ENSHGLG00000016569	PRPF3	81	39.464	WBGene00010844	prp-3	82	39.286	Caenorhabditis_elegans
ENSHGLG00000016569	PRPF3	100	99.561	ENSCJAG00000009926	PRPF3	100	99.561	Callithrix_jacchus
ENSHGLG00000016569	PRPF3	100	99.561	ENSCAFG00000011820	PRPF3	100	99.561	Canis_familiaris
ENSHGLG00000016569	PRPF3	80	99.817	ENSCAFG00020019653	PRPF3	100	99.817	Canis_lupus_dingo
ENSHGLG00000016569	PRPF3	100	99.561	ENSCHIG00000015434	PRPF3	100	99.561	Capra_hircus
ENSHGLG00000016569	PRPF3	100	99.268	ENSTSYG00000001383	PRPF3	100	99.268	Carlito_syrichta
ENSHGLG00000016569	PRPF3	93	82.233	ENSCAPG00000017812	PRPF3	95	82.704	Cavia_aperea
ENSHGLG00000016569	PRPF3	100	99.414	ENSCPOG00000008068	PRPF3	100	99.414	Cavia_porcellus
ENSHGLG00000016569	PRPF3	100	99.561	ENSCCAG00000026380	PRPF3	100	99.561	Cebus_capucinus
ENSHGLG00000016569	PRPF3	100	84.157	ENSCATG00000041778	PRPF3	100	84.157	Cercocebus_atys
ENSHGLG00000016569	PRPF3	100	99.707	ENSCLAG00000015009	PRPF3	100	99.707	Chinchilla_lanigera
ENSHGLG00000016569	PRPF3	77	99.291	ENSCHOG00000011645	PRPF3	77	99.291	Choloepus_hoffmanni
ENSHGLG00000016569	PRPF3	100	95.906	ENSCPBG00000008216	PRPF3	100	95.906	Chrysemys_picta_bellii
ENSHGLG00000016569	PRPF3	61	59.189	ENSCING00000003312	-	99	58.711	Ciona_intestinalis
ENSHGLG00000016569	PRPF3	83	54.035	ENSCSAVG00000008720	-	94	54.792	Ciona_savignyi
ENSHGLG00000016569	PRPF3	100	98.829	ENSCANG00000036769	PRPF3	100	98.829	Colobus_angolensis_palliatus
ENSHGLG00000016569	PRPF3	100	99.561	ENSCGRG00001019100	Prpf3	100	99.561	Cricetulus_griseus_chok1gshd
ENSHGLG00000016569	PRPF3	100	99.561	ENSCGRG00000007322	Prpf3	100	99.561	Cricetulus_griseus_crigri
ENSHGLG00000016569	PRPF3	100	72.152	ENSCSEG00000002532	prpf3	99	70.745	Cynoglossus_semilaevis
ENSHGLG00000016569	PRPF3	100	72.482	ENSCVAG00000009318	prpf3	99	72.199	Cyprinodon_variegatus
ENSHGLG00000016569	PRPF3	100	72.831	ENSDARG00000086425	prpf3	99	72.546	Danio_rerio
ENSHGLG00000016569	PRPF3	100	89.312	ENSDNOG00000005904	PRPF3	100	90.483	Dasypus_novemcinctus
ENSHGLG00000016569	PRPF3	93	99.211	ENSDORG00000008664	Prpf3	100	99.211	Dipodomys_ordii
ENSHGLG00000016569	PRPF3	81	53.086	FBgn0036915	Prp3	99	53.273	Drosophila_melanogaster
ENSHGLG00000016569	PRPF3	100	98.389	ENSETEG00000019124	PRPF3	100	98.389	Echinops_telfairi
ENSHGLG00000016569	PRPF3	100	63.934	ENSEBUG00000011680	prpf3	99	63.934	Eptatretus_burgeri
ENSHGLG00000016569	PRPF3	100	99.414	ENSEASG00005001566	PRPF3	100	99.414	Equus_asinus_asinus
ENSHGLG00000016569	PRPF3	100	99.561	ENSECAG00000019840	PRPF3	100	99.561	Equus_caballus
ENSHGLG00000016569	PRPF3	85	99.291	ENSEEUG00000007338	PRPF3	85	99.291	Erinaceus_europaeus
ENSHGLG00000016569	PRPF3	100	65.763	ENSELUG00000013624	prpf3	99	66.191	Esox_lucius
ENSHGLG00000016569	PRPF3	100	99.561	ENSFCAG00000013940	PRPF3	100	99.561	Felis_catus
ENSHGLG00000016569	PRPF3	100	99.561	ENSFDAG00000010365	PRPF3	100	99.561	Fukomys_damarensis
ENSHGLG00000016569	PRPF3	100	72.989	ENSFHEG00000021746	prpf3	99	72.701	Fundulus_heteroclitus
ENSHGLG00000016569	PRPF3	100	71.711	ENSGMOG00000008535	prpf3	99	71.570	Gadus_morhua
ENSHGLG00000016569	PRPF3	100	94.444	ENSGALG00000028205	PRPF3	100	94.444	Gallus_gallus
ENSHGLG00000016569	PRPF3	100	72.206	ENSGAFG00000012671	prpf3	99	71.920	Gambusia_affinis
ENSHGLG00000016569	PRPF3	100	70.822	ENSGACG00000011792	prpf3	99	71.105	Gasterosteus_aculeatus
ENSHGLG00000016569	PRPF3	100	95.614	ENSGAGG00000013765	PRPF3	100	95.264	Gopherus_agassizii
ENSHGLG00000016569	PRPF3	86	99.112	ENSGGOG00000013174	PRPF3	100	99.112	Gorilla_gorilla
ENSHGLG00000016569	PRPF3	100	72.872	ENSHBUG00000003493	prpf3	99	72.583	Haplochromis_burtoni
ENSHGLG00000016569	PRPF3	100	70.864	ENSHGLG00100008951	-	95	90.909	Heterocephalus_glaber_male
ENSHGLG00000016569	PRPF3	100	100.000	ENSHGLG00100007590	PRPF3	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000016569	PRPF3	100	68.706	ENSHCOG00000014058	prpf3	99	68.421	Hippocampus_comes
ENSHGLG00000016569	PRPF3	100	73.609	ENSIPUG00000000902	PRPF3	99	73.932	Ictalurus_punctatus
ENSHGLG00000016569	PRPF3	100	99.561	ENSSTOG00000001889	PRPF3	100	99.561	Ictidomys_tridecemlineatus
ENSHGLG00000016569	PRPF3	100	70.739	ENSKMAG00000001390	prpf3	99	70.455	Kryptolebias_marmoratus
ENSHGLG00000016569	PRPF3	100	70.407	ENSLBEG00000026310	prpf3	99	71.328	Labrus_bergylta
ENSHGLG00000016569	PRPF3	93	82.418	ENSLACG00000010541	PRPF3	100	82.575	Latimeria_chalumnae
ENSHGLG00000016569	PRPF3	100	99.268	ENSLAFG00000004713	PRPF3	100	99.268	Loxodonta_africana
ENSHGLG00000016569	PRPF3	100	99.561	ENSMFAG00000039791	PRPF3	100	99.561	Macaca_fascicularis
ENSHGLG00000016569	PRPF3	90	99.674	ENSMMUG00000016301	PRPF3	98	99.674	Macaca_mulatta
ENSHGLG00000016569	PRPF3	100	99.561	ENSMNEG00000038161	PRPF3	100	99.561	Macaca_nemestrina
ENSHGLG00000016569	PRPF3	99	66.814	ENSMLEG00000041065	-	98	66.224	Mandrillus_leucophaeus
ENSHGLG00000016569	PRPF3	86	99.112	ENSMLEG00000040609	PRPF3	100	99.112	Mandrillus_leucophaeus
ENSHGLG00000016569	PRPF3	100	72.096	ENSMAMG00000014968	prpf3	99	71.955	Mastacembelus_armatus
ENSHGLG00000016569	PRPF3	100	70.827	ENSMZEG00005015970	prpf3	99	70.506	Maylandia_zebra
ENSHGLG00000016569	PRPF3	100	94.444	ENSMGAG00000000707	PRPF3	100	94.444	Meleagris_gallopavo
ENSHGLG00000016569	PRPF3	100	99.268	ENSMAUG00000017112	Prpf3	100	99.268	Mesocricetus_auratus
ENSHGLG00000016569	PRPF3	100	99.268	ENSMICG00000015386	PRPF3	100	99.268	Microcebus_murinus
ENSHGLG00000016569	PRPF3	100	99.414	ENSMOCG00000000242	Prpf3	100	99.414	Microtus_ochrogaster
ENSHGLG00000016569	PRPF3	100	66.573	ENSMMOG00000016131	prpf3	99	67.376	Mola_mola
ENSHGLG00000016569	PRPF3	100	97.950	ENSMODG00000018774	PRPF3	100	97.950	Monodelphis_domestica
ENSHGLG00000016569	PRPF3	100	70.571	ENSMALG00000007257	prpf3	99	70.571	Monopterus_albus
ENSHGLG00000016569	PRPF3	100	99.122	MGP_CAROLIEiJ_G0025354	Prpf3	100	99.122	Mus_caroli
ENSHGLG00000016569	PRPF3	100	99.122	ENSMUSG00000015748	Prpf3	100	99.122	Mus_musculus
ENSHGLG00000016569	PRPF3	100	98.975	MGP_PahariEiJ_G0026798	Prpf3	100	98.975	Mus_pahari
ENSHGLG00000016569	PRPF3	100	99.122	MGP_SPRETEiJ_G0026298	Prpf3	100	99.122	Mus_spretus
ENSHGLG00000016569	PRPF3	100	96.193	ENSMPUG00000005080	PRPF3	100	96.193	Mustela_putorius_furo
ENSHGLG00000016569	PRPF3	100	99.123	ENSMLUG00000004646	-	100	99.123	Myotis_lucifugus
ENSHGLG00000016569	PRPF3	100	99.561	ENSNGAG00000000910	Prpf3	100	99.561	Nannospalax_galili
ENSHGLG00000016569	PRPF3	100	70.670	ENSNBRG00000003462	prpf3	99	70.210	Neolamprologus_brichardi
ENSHGLG00000016569	PRPF3	90	99.674	ENSNLEG00000009841	PRPF3	100	99.674	Nomascus_leucogenys
ENSHGLG00000016569	PRPF3	83	100.000	ENSMEUG00000008733	PRPF3	89	100.000	Notamacropus_eugenii
ENSHGLG00000016569	PRPF3	100	98.975	ENSOPRG00000010139	PRPF3	100	98.975	Ochotona_princeps
ENSHGLG00000016569	PRPF3	100	73.478	ENSODEG00000014412	-	100	73.478	Octodon_degus
ENSHGLG00000016569	PRPF3	100	99.122	ENSODEG00000011363	-	100	99.122	Octodon_degus
ENSHGLG00000016569	PRPF3	100	70.787	ENSONIG00000006394	prpf3	99	70.646	Oreochromis_niloticus
ENSHGLG00000016569	PRPF3	100	65.407	ENSOANG00000015441	PRPF3	100	65.116	Ornithorhynchus_anatinus
ENSHGLG00000016569	PRPF3	100	99.561	ENSOCUG00000011760	PRPF3	100	99.561	Oryctolagus_cuniculus
ENSHGLG00000016569	PRPF3	100	72.507	ENSORLG00000010330	prpf3	99	71.612	Oryzias_latipes
ENSHGLG00000016569	PRPF3	100	72.507	ENSORLG00020009054	prpf3	99	71.612	Oryzias_latipes_hni
ENSHGLG00000016569	PRPF3	100	72.301	ENSORLG00015015016	prpf3	99	71.408	Oryzias_latipes_hsok
ENSHGLG00000016569	PRPF3	100	71.920	ENSOMEG00000000940	prpf3	99	71.633	Oryzias_melastigma
ENSHGLG00000016569	PRPF3	100	93.567	ENSOGAG00000005352	PRPF3	100	93.567	Otolemur_garnettii
ENSHGLG00000016569	PRPF3	100	99.561	ENSOARG00000020798	PRPF3	100	99.561	Ovis_aries
ENSHGLG00000016569	PRPF3	100	99.414	ENSPPAG00000030983	PRPF3	100	99.414	Pan_paniscus
ENSHGLG00000016569	PRPF3	99	75.964	ENSPPAG00000043769	-	99	75.519	Pan_paniscus
ENSHGLG00000016569	PRPF3	100	99.561	ENSPPRG00000000731	PRPF3	100	99.561	Panthera_pardus
ENSHGLG00000016569	PRPF3	100	99.561	ENSPTIG00000005516	PRPF3	100	99.561	Panthera_tigris_altaica
ENSHGLG00000016569	PRPF3	99	75.074	ENSPTRG00000047819	-	99	74.629	Pan_troglodytes
ENSHGLG00000016569	PRPF3	100	99.561	ENSPTRG00000001254	PRPF3	100	99.561	Pan_troglodytes
ENSHGLG00000016569	PRPF3	100	99.414	ENSPANG00000000499	PRPF3	100	99.414	Papio_anubis
ENSHGLG00000016569	PRPF3	100	74.180	ENSPKIG00000010501	prpf3	99	74.322	Paramormyrops_kingsleyae
ENSHGLG00000016569	PRPF3	100	95.614	ENSPSIG00000014877	PRPF3	100	95.468	Pelodiscus_sinensis
ENSHGLG00000016569	PRPF3	100	67.294	ENSPMGG00000007776	prpf3	99	66.425	Periophthalmus_magnuspinnatus
ENSHGLG00000016569	PRPF3	100	99.561	ENSPEMG00000011672	Prpf3	100	99.561	Peromyscus_maniculatus_bairdii
ENSHGLG00000016569	PRPF3	63	72.146	ENSPMAG00000005588	prpf3	99	69.757	Petromyzon_marinus
ENSHGLG00000016569	PRPF3	100	97.950	ENSPCIG00000008795	PRPF3	100	97.950	Phascolarctos_cinereus
ENSHGLG00000016569	PRPF3	100	72.238	ENSPFOG00000013638	prpf3	99	71.671	Poecilia_formosa
ENSHGLG00000016569	PRPF3	100	72.636	ENSPLAG00000018103	prpf3	99	72.017	Poecilia_latipinna
ENSHGLG00000016569	PRPF3	100	72.350	ENSPMEG00000023546	prpf3	99	72.063	Poecilia_mexicana
ENSHGLG00000016569	PRPF3	100	72.143	ENSPREG00000017216	prpf3	99	71.857	Poecilia_reticulata
ENSHGLG00000016569	PRPF3	75	87.354	ENSPPYG00000018646	-	100	87.354	Pongo_abelii
ENSHGLG00000016569	PRPF3	93	99.685	ENSPPYG00000000900	PRPF3	99	99.685	Pongo_abelii
ENSHGLG00000016569	PRPF3	87	98.816	ENSPCAG00000014908	PRPF3	87	98.816	Procavia_capensis
ENSHGLG00000016569	PRPF3	100	99.414	ENSPCOG00000013828	PRPF3	100	99.414	Propithecus_coquereli
ENSHGLG00000016569	PRPF3	100	98.682	ENSPVAG00000013472	PRPF3	100	98.682	Pteropus_vampyrus
ENSHGLG00000016569	PRPF3	100	72.872	ENSPNYG00000004279	prpf3	99	72.583	Pundamilia_nyererei
ENSHGLG00000016569	PRPF3	100	73.239	ENSPNAG00000001799	prpf3	99	73.380	Pygocentrus_nattereri
ENSHGLG00000016569	PRPF3	100	98.975	ENSRNOG00000025629	Prpf3	100	98.975	Rattus_norvegicus
ENSHGLG00000016569	PRPF3	83	95.035	ENSRBIG00000028854	PRPF3	98	95.035	Rhinopithecus_bieti
ENSHGLG00000016569	PRPF3	100	99.561	ENSRROG00000027464	PRPF3	100	99.561	Rhinopithecus_roxellana
ENSHGLG00000016569	PRPF3	100	92.533	ENSSBOG00000033104	PRPF3	100	92.533	Saimiri_boliviensis_boliviensis
ENSHGLG00000016569	PRPF3	100	97.807	ENSSHAG00000009548	PRPF3	100	97.807	Sarcophilus_harrisii
ENSHGLG00000016569	PRPF3	100	73.521	ENSSFOG00015022014	prpf3	99	73.099	Scleropages_formosus
ENSHGLG00000016569	PRPF3	100	72.090	ENSSMAG00000015739	prpf3	99	71.809	Scophthalmus_maximus
ENSHGLG00000016569	PRPF3	100	69.297	ENSSDUG00000006840	prpf3	99	69.010	Seriola_dumerili
ENSHGLG00000016569	PRPF3	100	70.909	ENSSLDG00000015423	prpf3	99	71.189	Seriola_lalandi_dorsalis
ENSHGLG00000016569	PRPF3	100	98.975	ENSSARG00000011064	PRPF3	100	98.975	Sorex_araneus
ENSHGLG00000016569	PRPF3	100	92.507	ENSSPUG00000000809	PRPF3	100	92.507	Sphenodon_punctatus
ENSHGLG00000016569	PRPF3	100	70.927	ENSSPAG00000018721	prpf3	99	71.853	Stegastes_partitus
ENSHGLG00000016569	PRPF3	100	99.561	ENSSSCG00000030119	PRPF3	100	99.561	Sus_scrofa
ENSHGLG00000016569	PRPF3	100	80.556	ENSTGUG00000004552	PRPF3	100	80.556	Taeniopygia_guttata
ENSHGLG00000016569	PRPF3	100	72.069	ENSTRUG00000014923	prpf3	99	71.780	Takifugu_rubripes
ENSHGLG00000016569	PRPF3	100	72.766	ENSTNIG00000008058	prpf3	100	71.591	Tetraodon_nigroviridis
ENSHGLG00000016569	PRPF3	82	100.000	ENSTBEG00000014072	PRPF3	88	100.000	Tupaia_belangeri
ENSHGLG00000016569	PRPF3	100	93.265	ENSTTRG00000010616	PRPF3	100	93.265	Tursiops_truncatus
ENSHGLG00000016569	PRPF3	80	99.453	ENSUAMG00000009345	PRPF3	100	99.453	Ursus_americanus
ENSHGLG00000016569	PRPF3	100	99.561	ENSUMAG00000003720	PRPF3	100	99.561	Ursus_maritimus
ENSHGLG00000016569	PRPF3	89	100.000	ENSVPAG00000005425	PRPF3	89	100.000	Vicugna_pacos
ENSHGLG00000016569	PRPF3	100	99.561	ENSVVUG00000007933	PRPF3	100	99.561	Vulpes_vulpes
ENSHGLG00000016569	PRPF3	100	87.954	ENSXETG00000018654	prpf3	100	87.954	Xenopus_tropicalis
ENSHGLG00000016569	PRPF3	100	72.350	ENSXMAG00000016347	prpf3	99	71.733	Xiphophorus_maculatus