EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000016583 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 10727 bases
Position: chrJH602085.1:4480463-4491189
Accession: 101720097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000023263	PRP38	PF03371.15	1.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000023479	-	4275	XM_004853601	ENSHGLP00000023263	548 (aa)	XP_004853658	A0A0N8ETN8

Gene Model

Click here to download ENSHGLG00000016583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000016583's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000016583	PRPF38B	81	64.069	ENSATEG00000014482	-	59	84.000	Anabas_testudineus
ENSHGLG00000016583	PRPF38B	100	95.255	ENSBTAG00000047874	PRPF38B	100	95.073	Bos_taurus
ENSHGLG00000016583	PRPF38B	100	81.421	ENSCAFG00020010992	-	100	81.785	Canis_lupus_dingo
ENSHGLG00000016583	PRPF38B	100	95.255	ENSCHIG00000024357	-	100	95.073	Capra_hircus
ENSHGLG00000016583	PRPF38B	79	95.632	ENSCAPG00000009606	-	100	95.632	Cavia_aperea
ENSHGLG00000016583	PRPF38B	100	97.263	ENSCPOG00000039545	-	100	97.263	Cavia_porcellus
ENSHGLG00000016583	PRPF38B	100	98.543	ENSCLAG00000005801	-	100	98.543	Chinchilla_lanigera
ENSHGLG00000016583	PRPF38B	64	83.003	ENSCHOG00000008972	-	94	81.493	Choloepus_hoffmanni
ENSHGLG00000016583	PRPF38B	100	86.885	ENSCPBG00000028299	-	100	86.885	Chrysemys_picta_bellii
ENSHGLG00000016583	PRPF38B	91	60.594	ENSCSEG00000015030	-	59	81.752	Cynoglossus_semilaevis
ENSHGLG00000016583	PRPF38B	82	93.142	ENSETEG00000014690	-	91	93.366	Echinops_telfairi
ENSHGLG00000016583	PRPF38B	53	74.061	ENSELUG00000010390	-	50	78.113	Esox_lucius
ENSHGLG00000016583	PRPF38B	83	87.090	ENSFALG00000002673	-	88	88.352	Ficedula_albicollis
ENSHGLG00000016583	PRPF38B	94	57.786	ENSGMOG00000012080	-	58	82.784	Gadus_morhua
ENSHGLG00000016583	PRPF38B	100	86.799	ENSGALG00000001972	-	100	86.703	Gallus_gallus
ENSHGLG00000016583	PRPF38B	82	62.473	ENSGAFG00000008943	-	59	85.401	Gambusia_affinis
ENSHGLG00000016583	PRPF38B	100	87.067	ENSGAGG00000001563	-	100	87.067	Gopherus_agassizii
ENSHGLG00000016583	PRPF38B	100	99.818	ENSHGLG00100015525	-	100	99.818	Heterocephalus_glaber_male
ENSHGLG00000016583	PRPF38B	80	61.171	ENSKMAG00000005540	-	79	68.984	Kryptolebias_marmoratus
ENSHGLG00000016583	PRPF38B	97	74.270	ENSLACG00000015511	-	95	73.913	Latimeria_chalumnae
ENSHGLG00000016583	PRPF38B	100	90.146	ENSMOCG00000020285	-	100	90.146	Microtus_ochrogaster
ENSHGLG00000016583	PRPF38B	83	60.373	ENSMMOG00000011639	-	59	82.909	Mola_mola
ENSHGLG00000016583	PRPF38B	60	94.562	ENSMODG00000002350	-	100	92.559	Monodelphis_domestica
ENSHGLG00000016583	PRPF38B	82	63.425	ENSMALG00000019479	-	59	84.364	Monopterus_albus
ENSHGLG00000016583	PRPF38B	80	95.418	ENSOPRG00000013543	-	81	95.418	Ochotona_princeps
ENSHGLG00000016583	PRPF38B	82	65.171	ENSONIG00000010129	-	59	84.364	Oreochromis_niloticus
ENSHGLG00000016583	PRPF38B	91	85.882	ENSOANG00000007343	-	95	89.024	Ornithorhynchus_anatinus
ENSHGLG00000016583	PRPF38B	83	63.347	ENSORLG00000015621	-	87	92.763	Oryzias_latipes
ENSHGLG00000016583	PRPF38B	83	63.347	ENSORLG00020016276	-	87	92.763	Oryzias_latipes_hni
ENSHGLG00000016583	PRPF38B	92	60.707	ENSORLG00015016270	-	71	94.558	Oryzias_latipes_hsok
ENSHGLG00000016583	PRPF38B	83	63.771	ENSOMEG00000022050	-	89	92.208	Oryzias_melastigma
ENSHGLG00000016583	PRPF38B	100	95.985	ENSOGAG00000027048	-	100	95.985	Otolemur_garnettii
ENSHGLG00000016583	PRPF38B	100	93.796	ENSOARG00000018899	-	100	93.066	Ovis_aries
ENSHGLG00000016583	PRPF38B	97	62.546	ENSPKIG00000004815	-	53	88.848	Paramormyrops_kingsleyae
ENSHGLG00000016583	PRPF38B	96	65.185	ENSPKIG00000017291	-	65	69.341	Paramormyrops_kingsleyae
ENSHGLG00000016583	PRPF38B	100	85.974	ENSPSIG00000016569	-	100	86.157	Pelodiscus_sinensis
ENSHGLG00000016583	PRPF38B	82	63.113	ENSPFOG00000004025	-	78	95.238	Poecilia_formosa
ENSHGLG00000016583	PRPF38B	82	63.113	ENSPLAG00000019842	-	59	85.766	Poecilia_latipinna
ENSHGLG00000016583	PRPF38B	91	61.386	ENSPMEG00000004807	-	57	85.766	Poecilia_mexicana
ENSHGLG00000016583	PRPF38B	82	62.260	ENSPREG00000015599	-	80	95.238	Poecilia_reticulata
ENSHGLG00000016583	PRPF38B	51	84.643	ENSPNAG00000017484	-	53	85.978	Pygocentrus_nattereri
ENSHGLG00000016583	PRPF38B	100	91.241	ENSRNOG00000020438	Prpf38b	100	90.328	Rattus_norvegicus
ENSHGLG00000016583	PRPF38B	95	61.484	ENSSFOG00015011251	-	79	97.351	Scleropages_formosus
ENSHGLG00000016583	PRPF38B	83	63.202	ENSSLDG00000023487	-	82	92.763	Seriola_lalandi_dorsalis
ENSHGLG00000016583	PRPF38B	100	83.935	ENSSPUG00000017742	-	100	84.000	Sphenodon_punctatus
ENSHGLG00000016583	PRPF38B	71	69.192	ENSTRUG00000011765	-	80	67.617	Takifugu_rubripes
ENSHGLG00000016583	PRPF38B	50	80.565	ENSTNIG00000015299	-	68	83.696	Tetraodon_nigroviridis
ENSHGLG00000016583	PRPF38B	93	92.564	ENSTBEG00000007504	-	100	92.564	Tupaia_belangeri
ENSHGLG00000016583	PRPF38B	100	96.898	ENSTTRG00000006479	-	100	96.898	Tursiops_truncatus
ENSHGLG00000016583	PRPF38B	99	88.440	ENSVPAG00000005541	-	99	88.257	Vicugna_pacos
ENSHGLG00000016583	PRPF38B	94	76.015	ENSXETG00000005260	prpf38b	95	66.148	Xenopus_tropicalis
ENSHGLG00000016583	PRPF38B	83	61.443	ENSXCOG00000008329	-	59	85.401	Xiphophorus_couchianus
ENSHGLG00000016583	PRPF38B	83	61.443	ENSXMAG00000023831	-	59	85.401	Xiphophorus_maculatus