EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000016914 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 75192 bases
Position: chrJH602074.1:26513759-26588950
Accession: 101704205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000023706	RRM_1	PF00076.22	2.4e-22	1	2
ENSHGLP00000023706	RRM_1	PF00076.22	2.4e-22	2	2
ENSHGLP00000023705	RRM_1	PF00076.22	5.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000023923	RBM47-201	2184	XM_013073937	ENSHGLP00000023705	158 (aa)	-	-
ENSHGLT00000023924	RBM47-202	1341	-	ENSHGLP00000023706	446 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000016914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000016914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000016914	RBM47	84	71.212	ENSHGLG00000002940	-	57	56.015
ENSHGLG00000016914	RBM47	89	68.085	ENSHGLG00000008955	A1CF	62	49.596
ENSHGLG00000016914	RBM47	84	75.000	ENSHGLG00000002463	-	56	63.265
ENSHGLG00000016914	RBM47	84	67.424	ENSHGLG00000010742	-	50	55.039
ENSHGLG00000016914	RBM47	81	51.562	ENSHGLG00000009358	DND1	51	43.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000016914	RBM47	100	96.203	ENSG00000163694	RBM47	100	96.891	Homo_sapiens
ENSHGLG00000016914	RBM47	100	80.000	ENSAPOG00000011062	rbm47	100	61.624	Acanthochromis_polyacanthus
ENSHGLG00000016914	RBM47	100	94.304	ENSAMEG00000009672	RBM47	85	82.812	Ailuropoda_melanoleuca
ENSHGLG00000016914	RBM47	100	80.625	ENSACIG00000011531	rbm47	84	64.721	Amphilophus_citrinellus
ENSHGLG00000016914	RBM47	100	80.000	ENSAOCG00000022245	rbm47	100	61.481	Amphiprion_ocellaris
ENSHGLG00000016914	RBM47	100	80.000	ENSAPEG00000018304	rbm47	100	61.481	Amphiprion_percula
ENSHGLG00000016914	RBM47	100	76.744	ENSATEG00000018400	rbm47	84	63.333	Anabas_testudineus
ENSHGLG00000016914	RBM47	100	88.608	ENSAPLG00000013974	RBM47	84	71.011	Anas_platyrhynchos
ENSHGLG00000016914	RBM47	100	80.000	ENSACAG00000011833	RBM47	85	76.923	Anolis_carolinensis
ENSHGLG00000016914	RBM47	100	96.203	ENSANAG00000029440	RBM47	100	74.476	Aotus_nancymaae
ENSHGLG00000016914	RBM47	100	78.235	ENSACLG00000016902	rbm47	100	61.481	Astatotilapia_calliptera
ENSHGLG00000016914	RBM47	100	75.882	ENSAMXG00000021794	rbm47	84	62.051	Astyanax_mexicanus
ENSHGLG00000016914	RBM47	100	95.570	ENSBTAG00000002356	RBM47	84	91.870	Bos_taurus
ENSHGLG00000016914	RBM47	100	94.937	ENSCJAG00000019385	RBM47	100	74.335	Callithrix_jacchus
ENSHGLG00000016914	RBM47	93	87.805	ENSCAFG00000015898	RBM47	84	86.179	Canis_familiaris
ENSHGLG00000016914	RBM47	86	93.382	ENSCAFG00020010558	RBM47	94	69.438	Canis_lupus_dingo
ENSHGLG00000016914	RBM47	100	96.203	ENSCHIG00000026214	RBM47	84	91.870	Capra_hircus
ENSHGLG00000016914	RBM47	65	85.484	ENSTSYG00000033612	RBM47	62	80.645	Carlito_syrichta
ENSHGLG00000016914	RBM47	98	92.000	ENSCAPG00000008426	RBM47	84	90.400	Cavia_aperea
ENSHGLG00000016914	RBM47	100	96.835	ENSCPOG00000014100	RBM47	100	76.099	Cavia_porcellus
ENSHGLG00000016914	RBM47	97	73.333	ENSCCAG00000024397	-	99	48.315	Cebus_capucinus
ENSHGLG00000016914	RBM47	100	96.203	ENSCCAG00000030129	-	100	74.905	Cebus_capucinus
ENSHGLG00000016914	RBM47	100	96.203	ENSCATG00000042064	RBM47	100	74.857	Cercocebus_atys
ENSHGLG00000016914	RBM47	100	95.570	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSHGLG00000016914	RBM47	100	96.203	ENSCSAG00000017060	RBM47	84	85.039	Chlorocebus_sabaeus
ENSHGLG00000016914	RBM47	100	93.082	ENSCHOG00000011731	RBM47	71	84.810	Choloepus_hoffmanni
ENSHGLG00000016914	RBM47	100	89.241	ENSCPBG00000013831	RBM47	85	78.906	Chrysemys_picta_bellii
ENSHGLG00000016914	RBM47	100	96.203	ENSCANG00000019997	RBM47	100	74.857	Colobus_angolensis_palliatus
ENSHGLG00000016914	RBM47	100	93.038	ENSCGRG00001000623	-	100	72.053	Cricetulus_griseus_chok1gshd
ENSHGLG00000016914	RBM47	100	84.810	ENSCGRG00001020102	-	100	70.115	Cricetulus_griseus_chok1gshd
ENSHGLG00000016914	RBM47	100	83.544	ENSCGRG00000014760	-	100	69.732	Cricetulus_griseus_crigri
ENSHGLG00000016914	RBM47	100	93.038	ENSCGRG00000007762	-	100	93.038	Cricetulus_griseus_crigri
ENSHGLG00000016914	RBM47	100	78.481	ENSCSEG00000004545	rbm47	84	63.130	Cynoglossus_semilaevis
ENSHGLG00000016914	RBM47	100	78.481	ENSCVAG00000020144	rbm47	100	58.889	Cyprinodon_variegatus
ENSHGLG00000016914	RBM47	100	77.059	ENSDARG00000061985	rbm47	85	63.753	Danio_rerio
ENSHGLG00000016914	RBM47	100	94.937	ENSDNOG00000046854	RBM47	84	83.607	Dasypus_novemcinctus
ENSHGLG00000016914	RBM47	100	94.937	ENSDORG00000010144	Rbm47	85	87.302	Dipodomys_ordii
ENSHGLG00000016914	RBM47	89	95.745	ENSETEG00000009194	RBM47	85	84.921	Echinops_telfairi
ENSHGLG00000016914	RBM47	100	66.456	ENSEBUG00000011912	rbm47	70	54.233	Eptatretus_burgeri
ENSHGLG00000016914	RBM47	100	94.937	ENSEASG00005008443	RBM47	84	91.057	Equus_asinus_asinus
ENSHGLG00000016914	RBM47	100	94.937	ENSECAG00000004400	RBM47	84	91.057	Equus_caballus
ENSHGLG00000016914	RBM47	100	91.824	ENSEEUG00000001194	RBM47	57	95.283	Erinaceus_europaeus
ENSHGLG00000016914	RBM47	100	77.143	ENSELUG00000006148	rbm47	100	60.734	Esox_lucius
ENSHGLG00000016914	RBM47	100	95.570	ENSFCAG00000012399	RBM47	84	89.431	Felis_catus
ENSHGLG00000016914	RBM47	100	87.975	ENSFALG00000002861	RBM47	85	79.528	Ficedula_albicollis
ENSHGLG00000016914	RBM47	100	93.038	ENSFDAG00000016326	RBM47	100	74.713	Fukomys_damarensis
ENSHGLG00000016914	RBM47	100	79.747	ENSFHEG00000007938	rbm47	84	62.933	Fundulus_heteroclitus
ENSHGLG00000016914	RBM47	100	76.836	ENSGMOG00000014802	rbm47	85	63.427	Gadus_morhua
ENSHGLG00000016914	RBM47	100	87.975	ENSGALG00000014267	RBM47	100	70.557	Gallus_gallus
ENSHGLG00000016914	RBM47	100	79.747	ENSGAFG00000020571	rbm47	98	62.698	Gambusia_affinis
ENSHGLG00000016914	RBM47	100	74.138	ENSGACG00000016223	rbm47	100	58.780	Gasterosteus_aculeatus
ENSHGLG00000016914	RBM47	100	89.241	ENSGAGG00000020051	RBM47	85	78.906	Gopherus_agassizii
ENSHGLG00000016914	RBM47	100	96.203	ENSGGOG00000001367	RBM47	100	74.857	Gorilla_gorilla
ENSHGLG00000016914	RBM47	100	78.235	ENSHBUG00000003520	rbm47	100	61.439	Haplochromis_burtoni
ENSHGLG00000016914	RBM47	100	100.000	ENSHGLG00100014028	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000016914	RBM47	99	91.720	ENSHGLG00100003071	-	85	73.770	Heterocephalus_glaber_male
ENSHGLG00000016914	RBM47	100	80.625	ENSHCOG00000002074	rbm47	99	59.074	Hippocampus_comes
ENSHGLG00000016914	RBM47	100	79.114	ENSIPUG00000004743	rbm47	100	57.651	Ictalurus_punctatus
ENSHGLG00000016914	RBM47	100	94.304	ENSSTOG00000004727	RBM47	100	94.304	Ictidomys_tridecemlineatus
ENSHGLG00000016914	RBM47	100	90.000	ENSJJAG00000013823	Rbm47	85	86.508	Jaculus_jaculus
ENSHGLG00000016914	RBM47	100	80.000	ENSKMAG00000000084	rbm47	100	60.701	Kryptolebias_marmoratus
ENSHGLG00000016914	RBM47	100	80.000	ENSLBEG00000008436	rbm47	100	58.984	Labrus_bergylta
ENSHGLG00000016914	RBM47	100	86.076	ENSLACG00000007196	RBM47	84	72.441	Latimeria_chalumnae
ENSHGLG00000016914	RBM47	100	85.443	ENSLOCG00000012966	rbm47	80	67.200	Lepisosteus_oculatus
ENSHGLG00000016914	RBM47	100	94.304	ENSLAFG00000011998	RBM47	84	85.039	Loxodonta_africana
ENSHGLG00000016914	RBM47	100	96.203	ENSMFAG00000037967	RBM47	100	74.857	Macaca_fascicularis
ENSHGLG00000016914	RBM47	100	96.203	ENSMMUG00000012036	RBM47	100	96.891	Macaca_mulatta
ENSHGLG00000016914	RBM47	100	96.203	ENSMNEG00000040774	RBM47	100	74.857	Macaca_nemestrina
ENSHGLG00000016914	RBM47	100	96.203	ENSMLEG00000041432	RBM47	98	82.022	Mandrillus_leucophaeus
ENSHGLG00000016914	RBM47	100	78.363	ENSMAMG00000019143	rbm47	100	60.781	Mastacembelus_armatus
ENSHGLG00000016914	RBM47	100	78.235	ENSMZEG00005023659	rbm47	100	60.584	Maylandia_zebra
ENSHGLG00000016914	RBM47	100	88.608	ENSMGAG00000012226	RBM47	85	78.462	Meleagris_gallopavo
ENSHGLG00000016914	RBM47	100	93.038	ENSMAUG00000006493	Rbm47	100	93.038	Mesocricetus_auratus
ENSHGLG00000016914	RBM47	100	85.443	ENSMICG00000026417	RBM47	100	69.866	Microcebus_murinus
ENSHGLG00000016914	RBM47	100	93.671	ENSMOCG00000021170	Rbm47	100	93.671	Microtus_ochrogaster
ENSHGLG00000016914	RBM47	100	77.778	ENSMMOG00000007260	rbm47	84	63.144	Mola_mola
ENSHGLG00000016914	RBM47	100	89.241	ENSMODG00000007003	RBM47	84	80.800	Monodelphis_domestica
ENSHGLG00000016914	RBM47	87	82.517	ENSMODG00000015426	-	99	62.058	Monodelphis_domestica
ENSHGLG00000016914	RBM47	100	84.177	ENSMODG00000020561	-	84	68.293	Monodelphis_domestica
ENSHGLG00000016914	RBM47	100	76.582	ENSMALG00000005167	rbm47	100	60.111	Monopterus_albus
ENSHGLG00000016914	RBM47	100	91.772	MGP_CAROLIEiJ_G0027258	Rbm47	100	91.772	Mus_caroli
ENSHGLG00000016914	RBM47	100	91.772	ENSMUSG00000070780	Rbm47	100	91.772	Mus_musculus
ENSHGLG00000016914	RBM47	100	92.405	MGP_PahariEiJ_G0017040	Rbm47	100	92.405	Mus_pahari
ENSHGLG00000016914	RBM47	100	91.772	MGP_SPRETEiJ_G0028253	Rbm47	100	91.772	Mus_spretus
ENSHGLG00000016914	RBM47	100	95.570	ENSMPUG00000006177	RBM47	79	86.400	Mustela_putorius_furo
ENSHGLG00000016914	RBM47	100	93.671	ENSMLUG00000000889	RBM47	84	86.066	Myotis_lucifugus
ENSHGLG00000016914	RBM47	100	97.468	ENSNGAG00000003325	Rbm47	84	84.921	Nannospalax_galili
ENSHGLG00000016914	RBM47	100	78.824	ENSNBRG00000015092	rbm47	85	64.341	Neolamprologus_brichardi
ENSHGLG00000016914	RBM47	100	96.203	ENSNLEG00000017151	RBM47	100	74.476	Nomascus_leucogenys
ENSHGLG00000016914	RBM47	89	92.908	ENSMEUG00000009516	-	83	70.670	Notamacropus_eugenii
ENSHGLG00000016914	RBM47	81	91.057	ENSOPRG00000016507	-	72	85.366	Ochotona_princeps
ENSHGLG00000016914	RBM47	100	94.937	ENSODEG00000004873	RBM47	84	92.742	Octodon_degus
ENSHGLG00000016914	RBM47	100	76.301	ENSONIG00000009061	rbm47	85	63.333	Oreochromis_niloticus
ENSHGLG00000016914	RBM47	100	83.436	ENSOANG00000008978	RBM47	85	77.419	Ornithorhynchus_anatinus
ENSHGLG00000016914	RBM47	100	93.711	ENSOCUG00000012034	RBM47	84	90.244	Oryctolagus_cuniculus
ENSHGLG00000016914	RBM47	100	80.380	ENSORLG00000005847	rbm47	100	59.369	Oryzias_latipes
ENSHGLG00000016914	RBM47	100	80.380	ENSORLG00020005154	rbm47	100	59.555	Oryzias_latipes_hni
ENSHGLG00000016914	RBM47	100	81.013	ENSORLG00015000066	rbm47	100	59.926	Oryzias_latipes_hsok
ENSHGLG00000016914	RBM47	100	81.013	ENSOMEG00000010730	rbm47	84	63.733	Oryzias_melastigma
ENSHGLG00000016914	RBM47	100	96.203	ENSOGAG00000029367	-	84	87.200	Otolemur_garnettii
ENSHGLG00000016914	RBM47	100	87.975	ENSOGAG00000025193	-	84	78.689	Otolemur_garnettii
ENSHGLG00000016914	RBM47	98	90.984	ENSOARG00000012711	RBM47	83	89.344	Ovis_aries
ENSHGLG00000016914	RBM47	100	96.203	ENSPPAG00000029763	RBM47	97	73.958	Pan_paniscus
ENSHGLG00000016914	RBM47	100	95.570	ENSPPRG00000012873	RBM47	100	76.575	Panthera_pardus
ENSHGLG00000016914	RBM47	80	57.613	ENSPTIG00000017046	RBM47	81	78.689	Panthera_tigris_altaica
ENSHGLG00000016914	RBM47	100	96.203	ENSPTRG00000016006	RBM47	100	74.857	Pan_troglodytes
ENSHGLG00000016914	RBM47	100	96.203	ENSPANG00000005980	RBM47	100	74.857	Papio_anubis
ENSHGLG00000016914	RBM47	90	84.507	ENSPKIG00000005037	rbm47	86	61.616	Paramormyrops_kingsleyae
ENSHGLG00000016914	RBM47	100	76.923	ENSPKIG00000013431	RBM47	98	60.708	Paramormyrops_kingsleyae
ENSHGLG00000016914	RBM47	100	89.241	ENSPSIG00000017516	RBM47	80	83.333	Pelodiscus_sinensis
ENSHGLG00000016914	RBM47	100	79.747	ENSPMGG00000018540	rbm47	84	64.000	Periophthalmus_magnuspinnatus
ENSHGLG00000016914	RBM47	100	93.671	ENSPEMG00000011088	Rbm47	100	73.333	Peromyscus_maniculatus_bairdii
ENSHGLG00000016914	RBM47	100	74.713	ENSPFOG00000007997	rbm47	87	62.016	Poecilia_formosa
ENSHGLG00000016914	RBM47	100	79.114	ENSPLAG00000002072	rbm47	100	60.152	Poecilia_latipinna
ENSHGLG00000016914	RBM47	100	79.747	ENSPMEG00000017492	rbm47	100	59.926	Poecilia_mexicana
ENSHGLG00000016914	RBM47	100	79.747	ENSPREG00000008456	rbm47	100	60.531	Poecilia_reticulata
ENSHGLG00000016914	RBM47	92	81.633	ENSPPYG00000014688	RBM47	84	67.857	Pongo_abelii
ENSHGLG00000016914	RBM47	100	95.570	ENSPCAG00000011879	RBM47	77	81.250	Procavia_capensis
ENSHGLG00000016914	RBM47	100	87.975	ENSPCOG00000023451	RBM47	100	72.115	Propithecus_coquereli
ENSHGLG00000016914	RBM47	100	94.937	ENSPVAG00000003812	RBM47	85	85.600	Pteropus_vampyrus
ENSHGLG00000016914	RBM47	100	78.235	ENSPNYG00000022868	rbm47	85	64.083	Pundamilia_nyererei
ENSHGLG00000016914	RBM47	100	75.882	ENSPNAG00000007940	rbm47	84	62.113	Pygocentrus_nattereri
ENSHGLG00000016914	RBM47	100	93.038	ENSRNOG00000002408	Rbm47	84	85.484	Rattus_norvegicus
ENSHGLG00000016914	RBM47	100	96.203	ENSRBIG00000039601	RBM47	100	75.048	Rhinopithecus_bieti
ENSHGLG00000016914	RBM47	100	96.203	ENSRROG00000044696	RBM47	100	75.048	Rhinopithecus_roxellana
ENSHGLG00000016914	RBM47	100	95.570	ENSSBOG00000028475	RBM47	96	74.734	Saimiri_boliviensis_boliviensis
ENSHGLG00000016914	RBM47	100	90.506	ENSSHAG00000017576	RBM47	84	85.366	Sarcophilus_harrisii
ENSHGLG00000016914	RBM47	100	80.380	ENSSFOG00015024101	RBM47	84	61.067	Scleropages_formosus
ENSHGLG00000016914	RBM47	100	75.148	ENSSFOG00015012445	rbm47	84	62.532	Scleropages_formosus
ENSHGLG00000016914	RBM47	100	74.419	ENSSMAG00000009744	rbm47	100	58.998	Scophthalmus_maximus
ENSHGLG00000016914	RBM47	100	81.646	ENSSDUG00000022684	rbm47	84	64.533	Seriola_dumerili
ENSHGLG00000016914	RBM47	100	81.646	ENSSLDG00000003109	rbm47	100	60.367	Seriola_lalandi_dorsalis
ENSHGLG00000016914	RBM47	100	94.304	ENSSARG00000001735	RBM47	73	81.818	Sorex_araneus
ENSHGLG00000016914	RBM47	100	85.443	ENSSPUG00000007515	RBM47	100	66.095	Sphenodon_punctatus
ENSHGLG00000016914	RBM47	100	82.500	ENSSPAG00000001257	rbm47	100	61.183	Stegastes_partitus
ENSHGLG00000016914	RBM47	100	94.304	ENSSSCG00000008796	RBM47	85	90.244	Sus_scrofa
ENSHGLG00000016914	RBM47	100	87.975	ENSTGUG00000008705	RBM47	85	78.571	Taeniopygia_guttata
ENSHGLG00000016914	RBM47	94	84.564	ENSTRUG00000014050	rbm47	85	64.402	Takifugu_rubripes
ENSHGLG00000016914	RBM47	100	76.608	ENSTNIG00000006127	rbm47	84	62.982	Tetraodon_nigroviridis
ENSHGLG00000016914	RBM47	100	93.671	ENSTBEG00000001607	RBM47	76	84.615	Tupaia_belangeri
ENSHGLG00000016914	RBM47	100	94.937	ENSTTRG00000002839	RBM47	84	85.246	Tursiops_truncatus
ENSHGLG00000016914	RBM47	100	94.937	ENSUAMG00000021346	RBM47	84	85.600	Ursus_americanus
ENSHGLG00000016914	RBM47	86	93.382	ENSVVUG00000014774	RBM47	84	89.344	Vulpes_vulpes
ENSHGLG00000016914	RBM47	100	82.911	ENSXETG00000012802	rbm47	84	77.686	Xenopus_tropicalis
ENSHGLG00000016914	RBM47	100	79.747	ENSXCOG00000000780	rbm47	100	60.381	Xiphophorus_couchianus
ENSHGLG00000016914	RBM47	100	79.747	ENSXMAG00000009874	rbm47	100	59.889	Xiphophorus_maculatus