EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000016927 (Gene tree)
Gene ID: -
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 5854 bases
Position: chrJH602050.1:9101483-9107336
Accession: 101725849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000023724	EXOSC1	PF10447.9	1.2e-14	1	1
ENSHGLP00000023725	ECR1_N	PF14382.6	4.1e-09	1	1
ENSHGLP00000023724	ECR1_N	PF14382.6	5.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000023943	-	465	-	ENSHGLP00000023725	154 (aa)	-	UPI00034FDA7C
ENSHGLT00000023942	-	968	XM_004838588	ENSHGLP00000023724	195 (aa)	XP_004838645	G5C0C4

Gene Model

Click here to download ENSHGLG00000016927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000016927's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000016927	EXOSC1	100	97.403	ENSG00000171311	EXOSC1	100	96.923	Homo_sapiens
ENSHGLG00000016927	EXOSC1	98	80.105	ENSAPOG00000007822	exosc1	98	80.105	Acanthochromis_polyacanthus
ENSHGLG00000016927	EXOSC1	100	98.462	ENSAMEG00000000129	EXOSC1	100	98.462	Ailuropoda_melanoleuca
ENSHGLG00000016927	EXOSC1	96	79.255	ENSACIG00000018956	exosc1	92	79.255	Amphilophus_citrinellus
ENSHGLG00000016927	EXOSC1	98	80.105	ENSAOCG00000010699	exosc1	98	80.105	Amphiprion_ocellaris
ENSHGLG00000016927	EXOSC1	92	70.391	ENSAPEG00000012690	exosc1	96	70.391	Amphiprion_percula
ENSHGLG00000016927	EXOSC1	98	80.105	ENSATEG00000018683	exosc1	98	80.105	Anabas_testudineus
ENSHGLG00000016927	EXOSC1	99	84.974	ENSACAG00000002101	EXOSC1	99	84.974	Anolis_carolinensis
ENSHGLG00000016927	EXOSC1	100	98.701	ENSANAG00000034669	EXOSC1	100	98.701	Aotus_nancymaae
ENSHGLG00000016927	EXOSC1	98	80.105	ENSACLG00000021243	exosc1	98	80.105	Astatotilapia_calliptera
ENSHGLG00000016927	EXOSC1	98	81.675	ENSAMXG00000011116	exosc1	98	81.675	Astyanax_mexicanus
ENSHGLG00000016927	EXOSC1	100	97.949	ENSBTAG00000012699	EXOSC1	100	97.949	Bos_taurus
ENSHGLG00000016927	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSHGLG00000016927	EXOSC1	100	98.701	ENSCJAG00000016586	EXOSC1	100	98.701	Callithrix_jacchus
ENSHGLG00000016927	EXOSC1	100	97.949	ENSCAFG00000009068	EXOSC1	94	97.949	Canis_familiaris
ENSHGLG00000016927	EXOSC1	100	97.949	ENSCAFG00020006002	EXOSC1	94	97.949	Canis_lupus_dingo
ENSHGLG00000016927	EXOSC1	100	97.949	ENSCHIG00000015253	EXOSC1	100	97.949	Capra_hircus
ENSHGLG00000016927	EXOSC1	100	97.436	ENSTSYG00000000760	EXOSC1	100	97.436	Carlito_syrichta
ENSHGLG00000016927	EXOSC1	100	98.052	ENSCPOG00000001173	EXOSC1	100	98.052	Cavia_porcellus
ENSHGLG00000016927	EXOSC1	100	59.627	ENSCCAG00000023986	EXOSC1	100	59.627	Cebus_capucinus
ENSHGLG00000016927	EXOSC1	100	97.403	ENSCATG00000034114	EXOSC1	100	97.403	Cercocebus_atys
ENSHGLG00000016927	EXOSC1	100	98.701	ENSCLAG00000002463	EXOSC1	100	98.701	Chinchilla_lanigera
ENSHGLG00000016927	EXOSC1	100	96.410	ENSCSAG00000005870	EXOSC1	100	96.410	Chlorocebus_sabaeus
ENSHGLG00000016927	EXOSC1	96	84.492	ENSCHOG00000006477	EXOSC1	100	84.492	Choloepus_hoffmanni
ENSHGLG00000016927	EXOSC1	54	81.132	ENSCPBG00000011949	EXOSC1	88	81.132	Chrysemys_picta_bellii
ENSHGLG00000016927	EXOSC1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSHGLG00000016927	EXOSC1	95	57.219	ENSCSAVG00000010865	-	95	57.219	Ciona_savignyi
ENSHGLG00000016927	EXOSC1	100	97.403	ENSCANG00000034159	EXOSC1	100	97.403	Colobus_angolensis_palliatus
ENSHGLG00000016927	EXOSC1	100	98.052	ENSCGRG00001000335	Exosc1	100	98.052	Cricetulus_griseus_chok1gshd
ENSHGLG00000016927	EXOSC1	100	98.052	ENSCGRG00000011602	Exosc1	100	98.052	Cricetulus_griseus_crigri
ENSHGLG00000016927	EXOSC1	98	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSHGLG00000016927	EXOSC1	98	76.440	ENSCVAG00000016748	exosc1	98	76.440	Cyprinodon_variegatus
ENSHGLG00000016927	EXOSC1	98	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSHGLG00000016927	EXOSC1	75	97.973	ENSDNOG00000007983	EXOSC1	100	97.973	Dasypus_novemcinctus
ENSHGLG00000016927	EXOSC1	100	97.436	ENSDORG00000016528	Exosc1	100	97.436	Dipodomys_ordii
ENSHGLG00000016927	EXOSC1	94	48.677	FBgn0032346	Csl4	92	48.677	Drosophila_melanogaster
ENSHGLG00000016927	EXOSC1	100	96.410	ENSETEG00000002469	-	100	96.410	Echinops_telfairi
ENSHGLG00000016927	EXOSC1	99	62.755	ENSEBUG00000008164	exosc1	98	62.755	Eptatretus_burgeri
ENSHGLG00000016927	EXOSC1	100	88.718	ENSEASG00005008684	EXOSC1	100	88.718	Equus_asinus_asinus
ENSHGLG00000016927	EXOSC1	61	78.992	ENSECAG00000010621	EXOSC1	71	78.992	Equus_caballus
ENSHGLG00000016927	EXOSC1	100	97.436	ENSEEUG00000005647	EXOSC1	100	97.436	Erinaceus_europaeus
ENSHGLG00000016927	EXOSC1	94	80.435	ENSELUG00000017369	exosc1	81	80.435	Esox_lucius
ENSHGLG00000016927	EXOSC1	100	98.462	ENSFCAG00000040563	EXOSC1	94	98.462	Felis_catus
ENSHGLG00000016927	EXOSC1	100	83.590	ENSFALG00000008450	EXOSC1	100	83.590	Ficedula_albicollis
ENSHGLG00000016927	EXOSC1	100	99.487	ENSFDAG00000000846	EXOSC1	100	99.487	Fukomys_damarensis
ENSHGLG00000016927	EXOSC1	98	76.440	ENSFHEG00000009154	exosc1	98	76.440	Fundulus_heteroclitus
ENSHGLG00000016927	EXOSC1	98	80.105	ENSGMOG00000008993	exosc1	98	80.105	Gadus_morhua
ENSHGLG00000016927	EXOSC1	100	73.333	ENSGALG00000039917	EXOSC1	100	86.986	Gallus_gallus
ENSHGLG00000016927	EXOSC1	98	76.440	ENSGAFG00000010265	exosc1	94	76.440	Gambusia_affinis
ENSHGLG00000016927	EXOSC1	98	80.105	ENSGACG00000018936	exosc1	98	80.105	Gasterosteus_aculeatus
ENSHGLG00000016927	EXOSC1	100	85.128	ENSGAGG00000019192	EXOSC1	100	85.128	Gopherus_agassizii
ENSHGLG00000016927	EXOSC1	100	84.103	ENSGGOG00000003099	EXOSC1	100	84.103	Gorilla_gorilla
ENSHGLG00000016927	EXOSC1	98	80.105	ENSHBUG00000017857	exosc1	98	80.105	Haplochromis_burtoni
ENSHGLG00000016927	EXOSC1	100	100.000	ENSHGLG00100012208	EXOSC1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000016927	EXOSC1	98	79.058	ENSHCOG00000019882	exosc1	98	79.058	Hippocampus_comes
ENSHGLG00000016927	EXOSC1	98	80.628	ENSIPUG00000007685	exosc1	98	80.628	Ictalurus_punctatus
ENSHGLG00000016927	EXOSC1	100	98.701	ENSSTOG00000006615	EXOSC1	100	98.701	Ictidomys_tridecemlineatus
ENSHGLG00000016927	EXOSC1	63	81.967	ENSSTOG00000029860	-	93	81.967	Ictidomys_tridecemlineatus
ENSHGLG00000016927	EXOSC1	100	97.436	ENSJJAG00000013311	Exosc1	100	97.436	Jaculus_jaculus
ENSHGLG00000016927	EXOSC1	98	78.646	ENSKMAG00000001202	exosc1	81	78.646	Kryptolebias_marmoratus
ENSHGLG00000016927	EXOSC1	98	79.581	ENSLBEG00000011448	exosc1	98	79.581	Labrus_bergylta
ENSHGLG00000016927	EXOSC1	97	75.641	ENSLOCG00000003776	exosc1	98	75.641	Lepisosteus_oculatus
ENSHGLG00000016927	EXOSC1	100	98.462	ENSLAFG00000015983	EXOSC1	100	98.462	Loxodonta_africana
ENSHGLG00000016927	EXOSC1	100	97.403	ENSMFAG00000001493	EXOSC1	100	97.403	Macaca_fascicularis
ENSHGLG00000016927	EXOSC1	100	97.403	ENSMMUG00000020028	EXOSC1	100	97.403	Macaca_mulatta
ENSHGLG00000016927	EXOSC1	100	96.923	ENSMNEG00000029816	EXOSC1	100	96.923	Macaca_nemestrina
ENSHGLG00000016927	EXOSC1	100	97.403	ENSMLEG00000027643	EXOSC1	100	97.403	Mandrillus_leucophaeus
ENSHGLG00000016927	EXOSC1	98	80.628	ENSMAMG00000012200	exosc1	98	80.628	Mastacembelus_armatus
ENSHGLG00000016927	EXOSC1	98	80.105	ENSMZEG00005007042	exosc1	98	80.105	Maylandia_zebra
ENSHGLG00000016927	EXOSC1	100	84.615	ENSMAUG00000020462	-	100	84.615	Mesocricetus_auratus
ENSHGLG00000016927	EXOSC1	100	98.052	ENSMICG00000007664	EXOSC1	100	98.052	Microcebus_murinus
ENSHGLG00000016927	EXOSC1	100	98.052	ENSMOCG00000006004	-	100	98.052	Microtus_ochrogaster
ENSHGLG00000016927	EXOSC1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSHGLG00000016927	EXOSC1	99	75.817	ENSMMOG00000021403	exosc1	99	75.817	Mola_mola
ENSHGLG00000016927	EXOSC1	100	92.857	ENSMODG00000004213	EXOSC1	100	92.857	Monodelphis_domestica
ENSHGLG00000016927	EXOSC1	94	80.435	ENSMALG00000007061	exosc1	92	80.435	Monopterus_albus
ENSHGLG00000016927	EXOSC1	100	97.403	MGP_CAROLIEiJ_G0022959	Exosc1	100	97.403	Mus_caroli
ENSHGLG00000016927	EXOSC1	100	96.753	ENSMUSG00000034321	Exosc1	100	96.753	Mus_musculus
ENSHGLG00000016927	EXOSC1	100	98.052	MGP_PahariEiJ_G0014449	Exosc1	100	98.052	Mus_pahari
ENSHGLG00000016927	EXOSC1	100	97.403	MGP_SPRETEiJ_G0023880	Exosc1	100	97.403	Mus_spretus
ENSHGLG00000016927	EXOSC1	100	98.462	ENSMPUG00000017044	EXOSC1	100	98.462	Mustela_putorius_furo
ENSHGLG00000016927	EXOSC1	100	97.949	ENSMLUG00000009228	EXOSC1	100	97.949	Myotis_lucifugus
ENSHGLG00000016927	EXOSC1	100	95.897	ENSNGAG00000022033	Exosc1	100	95.897	Nannospalax_galili
ENSHGLG00000016927	EXOSC1	97	78.000	ENSNBRG00000024007	exosc1	97	78.000	Neolamprologus_brichardi
ENSHGLG00000016927	EXOSC1	100	97.403	ENSNLEG00000013872	EXOSC1	100	97.403	Nomascus_leucogenys
ENSHGLG00000016927	EXOSC1	59	91.304	ENSMEUG00000002246	EXOSC1	100	91.304	Notamacropus_eugenii
ENSHGLG00000016927	EXOSC1	100	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSHGLG00000016927	EXOSC1	100	99.351	ENSODEG00000016709	EXOSC1	100	99.351	Octodon_degus
ENSHGLG00000016927	EXOSC1	98	80.105	ENSONIG00000017683	exosc1	98	80.105	Oreochromis_niloticus
ENSHGLG00000016927	EXOSC1	59	93.043	ENSOANG00000006563	EXOSC1	98	91.129	Ornithorhynchus_anatinus
ENSHGLG00000016927	EXOSC1	100	91.795	ENSOCUG00000026461	-	100	91.795	Oryctolagus_cuniculus
ENSHGLG00000016927	EXOSC1	100	96.939	ENSOCUG00000011898	-	100	96.939	Oryctolagus_cuniculus
ENSHGLG00000016927	EXOSC1	98	78.646	ENSORLG00000011595	exosc1	98	78.646	Oryzias_latipes
ENSHGLG00000016927	EXOSC1	98	78.646	ENSORLG00020005831	exosc1	98	78.646	Oryzias_latipes_hni
ENSHGLG00000016927	EXOSC1	98	78.646	ENSORLG00015004317	exosc1	98	78.646	Oryzias_latipes_hsok
ENSHGLG00000016927	EXOSC1	97	65.318	ENSOMEG00000013907	exosc1	98	65.318	Oryzias_melastigma
ENSHGLG00000016927	EXOSC1	100	97.436	ENSOGAG00000016259	EXOSC1	100	97.436	Otolemur_garnettii
ENSHGLG00000016927	EXOSC1	100	97.949	ENSOARG00000010136	EXOSC1	100	97.949	Ovis_aries
ENSHGLG00000016927	EXOSC1	100	97.403	ENSPPAG00000039842	EXOSC1	100	97.403	Pan_paniscus
ENSHGLG00000016927	EXOSC1	100	98.462	ENSPPRG00000023366	EXOSC1	100	98.462	Panthera_pardus
ENSHGLG00000016927	EXOSC1	100	98.462	ENSPTIG00000017701	EXOSC1	100	98.462	Panthera_tigris_altaica
ENSHGLG00000016927	EXOSC1	100	97.403	ENSPTRG00000002808	EXOSC1	100	97.403	Pan_troglodytes
ENSHGLG00000016927	EXOSC1	100	97.403	ENSPANG00000021324	EXOSC1	100	97.403	Papio_anubis
ENSHGLG00000016927	EXOSC1	98	81.152	ENSPKIG00000016037	exosc1	98	81.152	Paramormyrops_kingsleyae
ENSHGLG00000016927	EXOSC1	75	82.192	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSHGLG00000016927	EXOSC1	98	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSHGLG00000016927	EXOSC1	100	98.052	ENSPEMG00000010710	-	100	98.052	Peromyscus_maniculatus_bairdii
ENSHGLG00000016927	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSHGLG00000016927	EXOSC1	100	93.846	ENSPCIG00000002210	EXOSC1	99	93.846	Phascolarctos_cinereus
ENSHGLG00000016927	EXOSC1	98	75.916	ENSPFOG00000006755	exosc1	94	75.916	Poecilia_formosa
ENSHGLG00000016927	EXOSC1	98	75.916	ENSPLAG00000005880	exosc1	98	75.916	Poecilia_latipinna
ENSHGLG00000016927	EXOSC1	98	75.916	ENSPMEG00000015598	exosc1	94	75.916	Poecilia_mexicana
ENSHGLG00000016927	EXOSC1	98	66.667	ENSPREG00000000405	exosc1	93	66.667	Poecilia_reticulata
ENSHGLG00000016927	EXOSC1	100	96.410	ENSPPYG00000002531	EXOSC1	100	96.410	Pongo_abelii
ENSHGLG00000016927	EXOSC1	100	97.436	ENSPCAG00000009135	EXOSC1	100	97.436	Procavia_capensis
ENSHGLG00000016927	EXOSC1	100	91.795	ENSPCOG00000027539	EXOSC1	100	91.795	Propithecus_coquereli
ENSHGLG00000016927	EXOSC1	100	98.462	ENSPVAG00000003372	EXOSC1	100	98.462	Pteropus_vampyrus
ENSHGLG00000016927	EXOSC1	98	80.105	ENSPNYG00000021745	exosc1	98	80.105	Pundamilia_nyererei
ENSHGLG00000016927	EXOSC1	98	80.628	ENSPNAG00000001944	exosc1	98	80.628	Pygocentrus_nattereri
ENSHGLG00000016927	EXOSC1	100	98.052	ENSRNOG00000048708	Exosc1	100	98.052	Rattus_norvegicus
ENSHGLG00000016927	EXOSC1	100	97.403	ENSRBIG00000035618	EXOSC1	100	97.403	Rhinopithecus_bieti
ENSHGLG00000016927	EXOSC1	100	97.403	ENSRROG00000032589	EXOSC1	100	97.403	Rhinopithecus_roxellana
ENSHGLG00000016927	EXOSC1	100	98.462	ENSSBOG00000000359	EXOSC1	100	98.462	Saimiri_boliviensis_boliviensis
ENSHGLG00000016927	EXOSC1	75	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSHGLG00000016927	EXOSC1	98	82.723	ENSSFOG00015009069	exosc1	98	82.723	Scleropages_formosus
ENSHGLG00000016927	EXOSC1	97	77.895	ENSSFOG00015016289	-	98	77.895	Scleropages_formosus
ENSHGLG00000016927	EXOSC1	98	80.628	ENSSMAG00000003721	exosc1	98	80.628	Scophthalmus_maximus
ENSHGLG00000016927	EXOSC1	98	80.628	ENSSDUG00000002993	exosc1	98	80.628	Seriola_dumerili
ENSHGLG00000016927	EXOSC1	98	80.628	ENSSLDG00000025181	exosc1	98	80.628	Seriola_lalandi_dorsalis
ENSHGLG00000016927	EXOSC1	100	83.590	ENSSARG00000000162	EXOSC1	100	83.590	Sorex_araneus
ENSHGLG00000016927	EXOSC1	99	83.505	ENSSPUG00000012263	EXOSC1	99	83.505	Sphenodon_punctatus
ENSHGLG00000016927	EXOSC1	98	71.728	ENSSPAG00000016792	exosc1	82	71.728	Stegastes_partitus
ENSHGLG00000016927	EXOSC1	100	97.436	ENSSSCG00000010518	EXOSC1	91	97.436	Sus_scrofa
ENSHGLG00000016927	EXOSC1	98	81.771	ENSTGUG00000009692	EXOSC1	99	81.771	Taeniopygia_guttata
ENSHGLG00000016927	EXOSC1	97	73.016	ENSTRUG00000007706	exosc1	98	73.016	Takifugu_rubripes
ENSHGLG00000016927	EXOSC1	97	72.917	ENSTNIG00000014079	exosc1	97	72.917	Tetraodon_nigroviridis
ENSHGLG00000016927	EXOSC1	100	89.231	ENSTBEG00000006011	EXOSC1	100	89.231	Tupaia_belangeri
ENSHGLG00000016927	EXOSC1	94	98.370	ENSTTRG00000009887	EXOSC1	100	98.370	Tursiops_truncatus
ENSHGLG00000016927	EXOSC1	100	85.475	ENSUAMG00000010266	EXOSC1	100	85.475	Ursus_americanus
ENSHGLG00000016927	EXOSC1	100	85.475	ENSUMAG00000022002	EXOSC1	100	85.475	Ursus_maritimus
ENSHGLG00000016927	EXOSC1	100	97.949	ENSVVUG00000023192	EXOSC1	63	97.949	Vulpes_vulpes
ENSHGLG00000016927	EXOSC1	98	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSHGLG00000016927	EXOSC1	62	84.167	ENSXCOG00000014499	exosc1	92	84.167	Xiphophorus_couchianus
ENSHGLG00000016927	EXOSC1	98	66.667	ENSXMAG00000023382	exosc1	93	66.667	Xiphophorus_maculatus