EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000016944 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 563173 bases
Position: chrJH602137.1:4550670-5113842
Accession: 101707083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000023755	Fox-1_C	PF12414.8	1.2e-42	1	1
ENSHGLP00000023759	Fox-1_C	PF12414.8	1.2e-42	1	1
ENSHGLP00000023757	Fox-1_C	PF12414.8	1.4e-40	1	1
ENSHGLP00000023758	Fox-1_C	PF12414.8	1.9e-40	1	1
ENSHGLP00000023756	Fox-1_C	PF12414.8	2.1e-40	1	1
ENSHGLP00000023758	RRM_1	PF00076.22	2.9e-18	1	1
ENSHGLP00000023757	RRM_1	PF00076.22	3.1e-18	1	1
ENSHGLP00000023756	RRM_1	PF00076.22	3.2e-18	1	1
ENSHGLP00000023755	RRM_1	PF00076.22	3.2e-18	1	1
ENSHGLP00000023759	RRM_1	PF00076.22	3.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000023973	RBFOX1-201	1194	XM_004864848	ENSHGLP00000023755	397 (aa)	XP_004864905	-
ENSHGLT00000023974	RBFOX1-202	4017	-	ENSHGLP00000023756	394 (aa)	-	-
ENSHGLT00000023975	RBFOX1-203	3967	XM_004864857	ENSHGLP00000023757	418 (aa)	XP_004864914	UPI00034F9A93
ENSHGLT00000023976	RBFOX1-204	4314	-	ENSHGLP00000023758	376 (aa)	-	-
ENSHGLT00000023977	RBFOX1-205	4261	XM_013065594	ENSHGLP00000023759	399 (aa)	XP_012921048	UPI000657418D

Gene Model

Click here to download ENSHGLG00000016944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000016944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000016944	RBFOX1	91	58.373	ENSHGLG00000008679	RBFOX3	100	62.087
ENSHGLG00000016944	RBFOX1	100	61.501	ENSHGLG00000012907	RBFOX2	100	62.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000016944	RBFOX1	100	98.489	ENSG00000078328	RBFOX1	100	98.489	Homo_sapiens
ENSHGLG00000016944	RBFOX1	100	75.904	ENSAPOG00000003197	rbfox1	100	76.386	Acanthochromis_polyacanthus
ENSHGLG00000016944	RBFOX1	63	94.800	ENSAMEG00000008605	RBFOX1	100	94.800	Ailuropoda_melanoleuca
ENSHGLG00000016944	RBFOX1	67	64.527	ENSACIG00000005478	rbfox1	68	64.983	Amphilophus_citrinellus
ENSHGLG00000016944	RBFOX1	80	70.347	ENSAOCG00000008283	rbfox1	99	70.032	Amphiprion_ocellaris
ENSHGLG00000016944	RBFOX1	95	71.429	ENSAPEG00000010636	rbfox1	100	71.316	Amphiprion_percula
ENSHGLG00000016944	RBFOX1	80	68.966	ENSATEG00000007513	rbfox1	99	68.652	Anabas_testudineus
ENSHGLG00000016944	RBFOX1	98	94.087	ENSAPLG00000013263	RBFOX1	97	94.344	Anas_platyrhynchos
ENSHGLG00000016944	RBFOX1	99	86.216	ENSACAG00000004013	RBFOX1	100	86.216	Anolis_carolinensis
ENSHGLG00000016944	RBFOX1	100	95.750	ENSANAG00000029527	RBFOX1	98	98.462	Aotus_nancymaae
ENSHGLG00000016944	RBFOX1	59	87.444	ENSAMXG00000002431	rbfox1	65	87.111	Astyanax_mexicanus
ENSHGLG00000016944	RBFOX1	100	97.872	ENSBTAG00000007210	RBFOX1	100	97.872	Bos_taurus
ENSHGLG00000016944	RBFOX1	100	97.608	ENSCJAG00000017351	RBFOX1	100	97.608	Callithrix_jacchus
ENSHGLG00000016944	RBFOX1	100	97.847	ENSCAFG00000019082	RBFOX1	100	97.847	Canis_familiaris
ENSHGLG00000016944	RBFOX1	100	83.756	ENSCAFG00020024881	RBFOX1	99	83.756	Canis_lupus_dingo
ENSHGLG00000016944	RBFOX1	100	97.872	ENSCHIG00000023549	RBFOX1	100	97.872	Capra_hircus
ENSHGLG00000016944	RBFOX1	97	98.356	ENSTSYG00000005334	RBFOX1	100	98.201	Carlito_syrichta
ENSHGLG00000016944	RBFOX1	100	99.282	ENSCAPG00000017669	RBFOX1	100	99.282	Cavia_aperea
ENSHGLG00000016944	RBFOX1	100	99.282	ENSCPOG00000011314	RBFOX1	100	99.282	Cavia_porcellus
ENSHGLG00000016944	RBFOX1	100	97.608	ENSCCAG00000023031	RBFOX1	100	97.608	Cebus_capucinus
ENSHGLG00000016944	RBFOX1	100	97.608	ENSCATG00000033816	RBFOX1	100	97.608	Cercocebus_atys
ENSHGLG00000016944	RBFOX1	100	99.282	ENSCLAG00000012761	RBFOX1	100	99.282	Chinchilla_lanigera
ENSHGLG00000016944	RBFOX1	100	97.872	ENSCSAG00000008739	RBFOX1	100	97.872	Chlorocebus_sabaeus
ENSHGLG00000016944	RBFOX1	100	76.077	ENSCHOG00000012843	RBFOX1	100	76.077	Choloepus_hoffmanni
ENSHGLG00000016944	RBFOX1	100	93.085	ENSCPBG00000026626	RBFOX1	100	93.085	Chrysemys_picta_bellii
ENSHGLG00000016944	RBFOX1	100	97.608	ENSCANG00000033125	RBFOX1	100	97.608	Colobus_angolensis_palliatus
ENSHGLG00000016944	RBFOX1	100	97.481	ENSCGRG00001013729	Rbfox1	100	97.481	Cricetulus_griseus_chok1gshd
ENSHGLG00000016944	RBFOX1	100	97.481	ENSCGRG00000003272	Rbfox1	100	97.481	Cricetulus_griseus_crigri
ENSHGLG00000016944	RBFOX1	95	71.537	ENSCSEG00000008840	rbfox1	100	71.537	Cynoglossus_semilaevis
ENSHGLG00000016944	RBFOX1	100	81.000	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSHGLG00000016944	RBFOX1	98	98.205	ENSDNOG00000043612	RBFOX1	95	97.716	Dasypus_novemcinctus
ENSHGLG00000016944	RBFOX1	100	93.564	ENSDORG00000010024	Rbfox1	100	93.564	Dipodomys_ordii
ENSHGLG00000016944	RBFOX1	100	77.990	ENSETEG00000003771	RBFOX1	100	77.990	Echinops_telfairi
ENSHGLG00000016944	RBFOX1	98	98.972	ENSEASG00005011599	RBFOX1	98	99.231	Equus_asinus_asinus
ENSHGLG00000016944	RBFOX1	100	98.670	ENSECAG00000012667	RBFOX1	100	98.670	Equus_caballus
ENSHGLG00000016944	RBFOX1	82	70.930	ENSELUG00000013096	rbfox1	99	68.478	Esox_lucius
ENSHGLG00000016944	RBFOX1	100	97.872	ENSFCAG00000025322	RBFOX1	100	97.872	Felis_catus
ENSHGLG00000016944	RBFOX1	86	94.136	ENSFALG00000004027	RBFOX1	100	91.892	Ficedula_albicollis
ENSHGLG00000016944	RBFOX1	100	99.761	ENSFDAG00000007388	RBFOX1	100	99.761	Fukomys_damarensis
ENSHGLG00000016944	RBFOX1	100	92.344	ENSGALG00000034325	RBFOX1	100	93.404	Gallus_gallus
ENSHGLG00000016944	RBFOX1	100	91.627	ENSGAGG00000023681	RBFOX1	100	94.430	Gopherus_agassizii
ENSHGLG00000016944	RBFOX1	100	97.608	ENSGGOG00000016871	-	100	97.608	Gorilla_gorilla
ENSHGLG00000016944	RBFOX1	100	100.000	ENSHGLG00100003272	RBFOX1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000016944	RBFOX1	85	70.605	ENSHCOG00000016419	rbfox1	91	70.690	Hippocampus_comes
ENSHGLG00000016944	RBFOX1	100	80.585	ENSIPUG00000015215	rbfox1	100	83.289	Ictalurus_punctatus
ENSHGLG00000016944	RBFOX1	100	97.985	ENSSTOG00000000322	RBFOX1	100	97.985	Ictidomys_tridecemlineatus
ENSHGLG00000016944	RBFOX1	100	94.458	ENSJJAG00000002575	Rbfox1	100	94.458	Jaculus_jaculus
ENSHGLG00000016944	RBFOX1	99	73.201	ENSLBEG00000014659	rbfox1	99	72.953	Labrus_bergylta
ENSHGLG00000016944	RBFOX1	98	86.260	ENSLOCG00000006675	rbfox1	99	86.260	Lepisosteus_oculatus
ENSHGLG00000016944	RBFOX1	77	98.701	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSHGLG00000016944	RBFOX1	100	97.368	ENSMFAG00000036447	RBFOX1	100	97.368	Macaca_fascicularis
ENSHGLG00000016944	RBFOX1	100	97.368	ENSMMUG00000003458	RBFOX1	100	97.368	Macaca_mulatta
ENSHGLG00000016944	RBFOX1	100	97.606	ENSMNEG00000032034	RBFOX1	100	97.368	Macaca_nemestrina
ENSHGLG00000016944	RBFOX1	100	97.608	ENSMLEG00000015382	RBFOX1	100	97.608	Mandrillus_leucophaeus
ENSHGLG00000016944	RBFOX1	95	75.000	ENSMAMG00000003142	rbfox1	100	75.510	Mastacembelus_armatus
ENSHGLG00000016944	RBFOX1	77	87.285	ENSMGAG00000008606	RBFOX1	98	87.063	Meleagris_gallopavo
ENSHGLG00000016944	RBFOX1	99	56.818	ENSMAUG00000020570	Rbfox1	99	55.808	Mesocricetus_auratus
ENSHGLG00000016944	RBFOX1	100	95.491	ENSMICG00000034286	RBFOX1	100	95.491	Microcebus_murinus
ENSHGLG00000016944	RBFOX1	100	97.481	ENSMOCG00000020932	Rbfox1	100	97.481	Microtus_ochrogaster
ENSHGLG00000016944	RBFOX1	86	71.014	ENSMMOG00000009716	rbfox1	86	71.386	Mola_mola
ENSHGLG00000016944	RBFOX1	94	96.893	ENSMODG00000005826	RBFOX1	100	96.893	Monodelphis_domestica
ENSHGLG00000016944	RBFOX1	100	75.795	ENSMALG00000003337	rbfox1	100	75.795	Monopterus_albus
ENSHGLG00000016944	RBFOX1	100	97.733	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.733	Mus_caroli
ENSHGLG00000016944	RBFOX1	100	97.481	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSHGLG00000016944	RBFOX1	100	97.733	MGP_PahariEiJ_G0016135	Rbfox1	100	97.733	Mus_pahari
ENSHGLG00000016944	RBFOX1	100	97.229	MGP_SPRETEiJ_G0021321	Rbfox1	100	97.229	Mus_spretus
ENSHGLG00000016944	RBFOX1	100	97.462	ENSMPUG00000014822	RBFOX1	100	97.462	Mustela_putorius_furo
ENSHGLG00000016944	RBFOX1	77	99.349	ENSMLUG00000015896	RBFOX1	100	99.349	Myotis_lucifugus
ENSHGLG00000016944	RBFOX1	100	97.608	ENSNGAG00000023276	Rbfox1	100	98.196	Nannospalax_galili
ENSHGLG00000016944	RBFOX1	98	60.482	ENSNBRG00000011084	rbfox1	94	61.017	Neolamprologus_brichardi
ENSHGLG00000016944	RBFOX1	100	97.368	ENSNLEG00000010017	-	100	97.368	Nomascus_leucogenys
ENSHGLG00000016944	RBFOX1	100	79.904	ENSMEUG00000012525	RBFOX1	100	79.904	Notamacropus_eugenii
ENSHGLG00000016944	RBFOX1	100	79.426	ENSOPRG00000006199	-	100	78.230	Ochotona_princeps
ENSHGLG00000016944	RBFOX1	100	98.565	ENSODEG00000013166	RBFOX1	100	98.565	Octodon_degus
ENSHGLG00000016944	RBFOX1	100	95.479	ENSOANG00000002379	RBFOX1	100	95.479	Ornithorhynchus_anatinus
ENSHGLG00000016944	RBFOX1	59	95.964	ENSOCUG00000001205	-	100	95.111	Oryctolagus_cuniculus
ENSHGLG00000016944	RBFOX1	100	96.725	ENSOGAG00000025535	RBFOX1	100	96.725	Otolemur_garnettii
ENSHGLG00000016944	RBFOX1	65	86.475	ENSOARG00000005135	RBFOX1	100	84.861	Ovis_aries
ENSHGLG00000016944	RBFOX1	98	98.454	ENSPPAG00000036238	-	100	98.454	Pan_paniscus
ENSHGLG00000016944	RBFOX1	100	97.608	ENSPPRG00000006546	RBFOX1	100	97.608	Panthera_pardus
ENSHGLG00000016944	RBFOX1	100	86.146	ENSPTIG00000021154	RBFOX1	100	86.224	Panthera_tigris_altaica
ENSHGLG00000016944	RBFOX1	100	97.608	ENSPTRG00000007744	RBFOX1	100	97.608	Pan_troglodytes
ENSHGLG00000016944	RBFOX1	100	97.608	ENSPANG00000026500	RBFOX1	100	97.608	Papio_anubis
ENSHGLG00000016944	RBFOX1	80	82.392	ENSPKIG00000019353	rbfox1	88	82.392	Paramormyrops_kingsleyae
ENSHGLG00000016944	RBFOX1	100	81.454	ENSPKIG00000009667	-	99	81.843	Paramormyrops_kingsleyae
ENSHGLG00000016944	RBFOX1	100	93.484	ENSPSIG00000006523	RBFOX1	100	93.484	Pelodiscus_sinensis
ENSHGLG00000016944	RBFOX1	100	97.733	ENSPEMG00000017607	Rbfox1	100	97.733	Peromyscus_maniculatus_bairdii
ENSHGLG00000016944	RBFOX1	73	92.414	ENSPCIG00000026887	RBFOX1	100	92.414	Phascolarctos_cinereus
ENSHGLG00000016944	RBFOX1	100	97.716	ENSPPYG00000007079	-	100	97.716	Pongo_abelii
ENSHGLG00000016944	RBFOX1	90	88.624	ENSPCAG00000002630	RBFOX1	100	88.624	Procavia_capensis
ENSHGLG00000016944	RBFOX1	100	97.608	ENSPCOG00000025687	RBFOX1	100	97.608	Propithecus_coquereli
ENSHGLG00000016944	RBFOX1	100	94.019	ENSPVAG00000013467	RBFOX1	100	94.019	Pteropus_vampyrus
ENSHGLG00000016944	RBFOX1	95	80.556	ENSPNAG00000023109	rbfox1	100	80.556	Pygocentrus_nattereri
ENSHGLG00000016944	RBFOX1	100	94.976	ENSRNOG00000002827	Rbfox1	100	94.976	Rattus_norvegicus
ENSHGLG00000016944	RBFOX1	100	97.872	ENSRBIG00000044478	RBFOX1	100	98.454	Rhinopithecus_bieti
ENSHGLG00000016944	RBFOX1	100	97.608	ENSRROG00000044411	RBFOX1	100	97.608	Rhinopithecus_roxellana
ENSHGLG00000016944	RBFOX1	100	97.744	ENSSBOG00000033726	RBFOX1	100	97.744	Saimiri_boliviensis_boliviensis
ENSHGLG00000016944	RBFOX1	100	91.940	ENSSHAG00000009257	RBFOX1	100	91.940	Sarcophilus_harrisii
ENSHGLG00000016944	RBFOX1	100	67.990	ENSSFOG00015023675	rbfox1	93	87.778	Scleropages_formosus
ENSHGLG00000016944	RBFOX1	88	70.112	ENSSFOG00015009955	-	87	68.182	Scleropages_formosus
ENSHGLG00000016944	RBFOX1	98	76.847	ENSSMAG00000015505	rbfox1	96	73.223	Scophthalmus_maximus
ENSHGLG00000016944	RBFOX1	98	74.490	ENSSDUG00000016413	rbfox1	99	74.300	Seriola_dumerili
ENSHGLG00000016944	RBFOX1	85	72.353	ENSSLDG00000009353	rbfox1	97	72.024	Seriola_lalandi_dorsalis
ENSHGLG00000016944	RBFOX1	85	82.059	ENSSPUG00000009732	RBFOX1	87	82.111	Sphenodon_punctatus
ENSHGLG00000016944	RBFOX1	98	76.108	ENSSPAG00000009723	rbfox1	100	75.862	Stegastes_partitus
ENSHGLG00000016944	RBFOX1	100	95.696	ENSSSCG00000007917	RBFOX1	100	98.588	Sus_scrofa
ENSHGLG00000016944	RBFOX1	98	94.087	ENSTGUG00000004562	RBFOX1	100	94.344	Taeniopygia_guttata
ENSHGLG00000016944	RBFOX1	98	75.795	ENSTRUG00000020940	rbfox1	100	75.795	Takifugu_rubripes
ENSHGLG00000016944	RBFOX1	67	57.006	ENSTNIG00000002567	rbfox1	100	58.599	Tetraodon_nigroviridis
ENSHGLG00000016944	RBFOX1	81	82.759	ENSTBEG00000009169	-	81	82.759	Tupaia_belangeri
ENSHGLG00000016944	RBFOX1	100	97.608	ENSTTRG00000005700	RBFOX1	100	97.608	Tursiops_truncatus
ENSHGLG00000016944	RBFOX1	100	93.401	ENSUAMG00000024633	RBFOX1	99	93.401	Ursus_americanus
ENSHGLG00000016944	RBFOX1	100	84.772	ENSUMAG00000003579	RBFOX1	99	84.772	Ursus_maritimus
ENSHGLG00000016944	RBFOX1	81	99.026	ENSVPAG00000001284	RBFOX1	81	99.026	Vicugna_pacos
ENSHGLG00000016944	RBFOX1	100	97.872	ENSVVUG00000017311	RBFOX1	100	97.872	Vulpes_vulpes