EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000017105 (Gene tree)
Gene ID: -
Gene Symbol: SRRM1
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 32081 bases
Position: chrJH602077.1:9010499-9042579
Accession: 101724550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000024001	PWI	PF01480.17	6.4e-30	1	1
ENSHGLP00000024000	PWI	PF01480.17	6.4e-30	1	1
ENSHGLP00000023999	PWI	PF01480.17	6.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000024217	SRRM1-201	3055	XM_004850597	ENSHGLP00000023999	914 (aa)	XP_004850654	UPI0003500E55
ENSHGLT00000024218	SRRM1-202	3013	XM_004850600	ENSHGLP00000024000	900 (aa)	XP_004850657	UPI000350099E
ENSHGLT00000024219	SRRM1-203	2688	-	ENSHGLP00000024001	895 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000017105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000017105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000017105	SRRM1	100	97.345	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSHGLG00000017105	SRRM1	100	96.841	ENSAMEG00000010075	SRRM1	100	96.841	Ailuropoda_melanoleuca
ENSHGLG00000017105	SRRM1	60	65.599	ENSAPLG00000002066	SRRM1	59	75.936	Anas_platyrhynchos
ENSHGLG00000017105	SRRM1	100	96.950	ENSANAG00000035606	SRRM1	100	96.950	Aotus_nancymaae
ENSHGLG00000017105	SRRM1	100	96.892	ENSBTAG00000013772	SRRM1	100	96.892	Bos_taurus
ENSHGLG00000017105	SRRM1	100	96.187	ENSCJAG00000020822	SRRM1	100	96.224	Callithrix_jacchus
ENSHGLG00000017105	SRRM1	100	97.124	ENSCAFG00020020948	SRRM1	99	98.250	Canis_lupus_dingo
ENSHGLG00000017105	SRRM1	100	95.619	ENSCHIG00000014656	SRRM1	100	95.619	Capra_hircus
ENSHGLG00000017105	SRRM1	100	96.903	ENSTSYG00000006782	SRRM1	100	96.903	Carlito_syrichta
ENSHGLG00000017105	SRRM1	99	95.705	ENSCAPG00000011473	SRRM1	100	95.705	Cavia_aperea
ENSHGLG00000017105	SRRM1	100	96.612	ENSCPOG00000015594	SRRM1	100	96.612	Cavia_porcellus
ENSHGLG00000017105	SRRM1	100	96.792	ENSCCAG00000029474	SRRM1	100	96.792	Cebus_capucinus
ENSHGLG00000017105	SRRM1	100	97.596	ENSCLAG00000014592	SRRM1	100	97.596	Chinchilla_lanigera
ENSHGLG00000017105	SRRM1	74	96.944	ENSCHOG00000000027	SRRM1	71	96.944	Choloepus_hoffmanni
ENSHGLG00000017105	SRRM1	100	96.401	ENSEASG00005004270	SRRM1	100	96.401	Equus_asinus_asinus
ENSHGLG00000017105	SRRM1	100	96.567	ENSECAG00000026981	SRRM1	100	96.567	Equus_caballus
ENSHGLG00000017105	SRRM1	100	97.235	ENSFCAG00000000678	-	100	97.235	Felis_catus
ENSHGLG00000017105	SRRM1	100	98.907	ENSFDAG00000009903	SRRM1	100	98.907	Fukomys_damarensis
ENSHGLG00000017105	SRRM1	100	97.345	ENSGGOG00000005209	SRRM1	100	97.345	Gorilla_gorilla
ENSHGLG00000017105	SRRM1	100	99.553	ENSHGLG00100016772	SRRM1	99	99.554	Heterocephalus_glaber_male
ENSHGLG00000017105	SRRM1	100	97.930	ENSSTOG00000014640	SRRM1	100	97.930	Ictidomys_tridecemlineatus
ENSHGLG00000017105	SRRM1	100	94.261	ENSLAFG00000013830	SRRM1	100	94.261	Loxodonta_africana
ENSHGLG00000017105	SRRM1	86	73.599	ENSMFAG00000038841	-	61	75.403	Macaca_fascicularis
ENSHGLG00000017105	SRRM1	55	76.411	ENSMMUG00000039269	-	59	75.202	Macaca_mulatta
ENSHGLG00000017105	SRRM1	60	66.916	ENSMLEG00000032221	-	61	68.952	Mandrillus_leucophaeus
ENSHGLG00000017105	SRRM1	60	100.000	ENSMLEG00000038030	-	92	98.004	Mandrillus_leucophaeus
ENSHGLG00000017105	SRRM1	100	97.168	ENSMICG00000006553	SRRM1	100	97.168	Microcebus_murinus
ENSHGLG00000017105	SRRM1	59	90.503	ENSMLUG00000006246	SRRM1	59	87.337	Myotis_lucifugus
ENSHGLG00000017105	SRRM1	100	97.345	ENSNLEG00000008966	SRRM1	100	97.345	Nomascus_leucogenys
ENSHGLG00000017105	SRRM1	54	89.474	ENSMEUG00000014704	SRRM1	53	85.526	Notamacropus_eugenii
ENSHGLG00000017105	SRRM1	100	96.083	ENSOCUG00000008438	SRRM1	100	96.083	Oryctolagus_cuniculus
ENSHGLG00000017105	SRRM1	100	96.950	ENSOGAG00000010210	SRRM1	100	96.950	Otolemur_garnettii
ENSHGLG00000017105	SRRM1	92	97.515	ENSOARG00000006453	SRRM1	99	97.515	Ovis_aries
ENSHGLG00000017105	SRRM1	100	97.235	ENSPPAG00000043918	SRRM1	100	97.235	Pan_paniscus
ENSHGLG00000017105	SRRM1	100	97.235	ENSPPRG00000002509	SRRM1	100	97.235	Panthera_pardus
ENSHGLG00000017105	SRRM1	100	97.386	ENSPTRG00000000349	SRRM1	100	97.386	Pan_troglodytes
ENSHGLG00000017105	SRRM1	55	73.535	ENSPANG00000035568	-	59	71.919	Papio_anubis
ENSHGLG00000017105	SRRM1	100	96.732	ENSPPYG00000001716	SRRM1	100	96.732	Pongo_abelii
ENSHGLG00000017105	SRRM1	100	96.953	ENSPCOG00000021311	SRRM1	100	96.953	Propithecus_coquereli
ENSHGLG00000017105	SRRM1	100	96.732	ENSPVAG00000005836	SRRM1	100	96.732	Pteropus_vampyrus
ENSHGLG00000017105	SRRM1	100	95.202	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSHGLG00000017105	SRRM1	61	92.131	ENSSARG00000013718	SRRM1	60	91.803	Sorex_araneus
ENSHGLG00000017105	SRRM1	99	96.817	ENSSSCG00000032947	SRRM1	100	96.701	Sus_scrofa
ENSHGLG00000017105	SRRM1	100	96.834	ENSTBEG00000000100	SRRM1	100	96.834	Tupaia_belangeri
ENSHGLG00000017105	SRRM1	99	96.048	ENSTTRG00000009365	SRRM1	100	96.048	Tursiops_truncatus
ENSHGLG00000017105	SRRM1	89	98.246	ENSUMAG00000013121	SRRM1	95	98.246	Ursus_maritimus
ENSHGLG00000017105	SRRM1	99	94.631	ENSVVUG00000026966	SRRM1	97	94.631	Vulpes_vulpes