EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000017150 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4
Alias: -
Full Name: cleavage and polyadenylation specific factor 4
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 16742 bases
Position: chrJH602053.1:32860137-32876878
Accession: 101698559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000024060	zf-CCCH	PF00642.24	3.2e-20	1	2
ENSHGLP00000024060	zf-CCCH	PF00642.24	3.2e-20	2	2
ENSHGLP00000024061	zf-CCCH	PF00642.24	1.3e-15	1	2
ENSHGLP00000024061	zf-CCCH	PF00642.24	1.3e-15	2	2
ENSHGLP00000024061	zf-CCHC	PF00098.23	3.1e-06	1	1
ENSHGLP00000024060	zf-CCHC	PF00098.23	4.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000024280	-	636	-	ENSHGLP00000024061	211 (aa)	-	-
ENSHGLT00000024279	-	1841	XM_004840511	ENSHGLP00000024060	271 (aa)	XP_004840568	A0A0P6JB34

Gene Model

Click here to download ENSHGLG00000017150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000017150's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000017150	CPSF4	100	98.578	ENSG00000160917	CPSF4	100	100.000	Homo_sapiens
ENSHGLG00000017150	CPSF4	68	73.770	ENSAPOG00000004921	cpsf4	100	73.770	Acanthochromis_polyacanthus
ENSHGLG00000017150	CPSF4	100	98.155	ENSAMEG00000006252	CPSF4	100	98.155	Ailuropoda_melanoleuca
ENSHGLG00000017150	CPSF4	100	78.229	ENSACIG00000009248	cpsf4	100	76.838	Amphilophus_citrinellus
ENSHGLG00000017150	CPSF4	100	84.502	ENSAOCG00000019616	cpsf4	100	84.502	Amphiprion_ocellaris
ENSHGLG00000017150	CPSF4	100	84.502	ENSAPEG00000011679	cpsf4	100	84.502	Amphiprion_percula
ENSHGLG00000017150	CPSF4	100	83.883	ENSATEG00000007010	cpsf4	100	83.883	Anabas_testudineus
ENSHGLG00000017150	CPSF4	100	92.251	ENSACAG00000012941	CPSF4	89	92.251	Anolis_carolinensis
ENSHGLG00000017150	CPSF4	100	98.578	ENSANAG00000021360	CPSF4	100	98.578	Aotus_nancymaae
ENSHGLG00000017150	CPSF4	100	83.026	ENSACLG00000010374	cpsf4	100	83.026	Astatotilapia_calliptera
ENSHGLG00000017150	CPSF4	100	85.308	ENSAMXG00000031647	cpsf4	100	85.782	Astyanax_mexicanus
ENSHGLG00000017150	CPSF4	100	88.561	ENSBTAG00000002090	CPSF4	100	88.561	Bos_taurus
ENSHGLG00000017150	CPSF4	100	98.578	ENSCJAG00000015826	CPSF4	100	98.578	Callithrix_jacchus
ENSHGLG00000017150	CPSF4	100	98.585	ENSCAFG00000015036	CPSF4	100	98.585	Canis_familiaris
ENSHGLG00000017150	CPSF4	100	91.513	ENSCAFG00020014462	CPSF4	100	91.513	Canis_lupus_dingo
ENSHGLG00000017150	CPSF4	100	98.578	ENSCHIG00000014313	CPSF4	100	98.578	Capra_hircus
ENSHGLG00000017150	CPSF4	100	98.578	ENSTSYG00000005712	-	100	98.578	Carlito_syrichta
ENSHGLG00000017150	CPSF4	85	89.503	ENSTSYG00000008195	-	100	89.503	Carlito_syrichta
ENSHGLG00000017150	CPSF4	100	88.263	ENSTSYG00000014604	-	100	88.263	Carlito_syrichta
ENSHGLG00000017150	CPSF4	81	97.727	ENSCAPG00000013881	CPSF4	87	97.727	Cavia_aperea
ENSHGLG00000017150	CPSF4	100	99.526	ENSCPOG00000001783	CPSF4	100	99.526	Cavia_porcellus
ENSHGLG00000017150	CPSF4	100	98.578	ENSCCAG00000028291	CPSF4	100	98.578	Cebus_capucinus
ENSHGLG00000017150	CPSF4	100	98.578	ENSCATG00000038440	CPSF4	100	98.578	Cercocebus_atys
ENSHGLG00000017150	CPSF4	100	99.052	ENSCLAG00000007050	CPSF4	100	99.052	Chinchilla_lanigera
ENSHGLG00000017150	CPSF4	100	97.417	ENSCSAG00000017795	CPSF4	100	97.417	Chlorocebus_sabaeus
ENSHGLG00000017150	CPSF4	80	94.037	ENSCPBG00000020869	CPSF4	100	94.037	Chrysemys_picta_bellii
ENSHGLG00000017150	CPSF4	61	81.212	ENSCPBG00000010269	-	100	80.723	Chrysemys_picta_bellii
ENSHGLG00000017150	CPSF4	97	55.894	ENSCING00000021080	-	97	55.682	Ciona_intestinalis
ENSHGLG00000017150	CPSF4	96	54.225	ENSCSAVG00000011469	-	97	57.803	Ciona_savignyi
ENSHGLG00000017150	CPSF4	100	98.578	ENSCANG00000019384	CPSF4	100	98.578	Colobus_angolensis_palliatus
ENSHGLG00000017150	CPSF4	100	99.526	ENSCGRG00001024184	Cpsf4	100	99.526	Cricetulus_griseus_chok1gshd
ENSHGLG00000017150	CPSF4	100	99.526	ENSCGRG00000013892	Cpsf4	100	99.526	Cricetulus_griseus_crigri
ENSHGLG00000017150	CPSF4	100	84.360	ENSCSEG00000019055	cpsf4	100	84.360	Cynoglossus_semilaevis
ENSHGLG00000017150	CPSF4	100	83.026	ENSCVAG00000016528	cpsf4	100	83.026	Cyprinodon_variegatus
ENSHGLG00000017150	CPSF4	100	84.926	ENSDARG00000020217	cpsf4	100	84.926	Danio_rerio
ENSHGLG00000017150	CPSF4	100	97.786	ENSDNOG00000006344	CPSF4	100	97.786	Dasypus_novemcinctus
ENSHGLG00000017150	CPSF4	81	97.260	ENSDORG00000000742	Cpsf4	100	97.260	Dipodomys_ordii
ENSHGLG00000017150	CPSF4	100	54.082	FBgn0015621	Clp	99	53.242	Drosophila_melanogaster
ENSHGLG00000017150	CPSF4	73	100.000	ENSETEG00000002608	CPSF4	70	100.000	Echinops_telfairi
ENSHGLG00000017150	CPSF4	99	65.314	ENSEBUG00000012552	cpsf4	98	63.941	Eptatretus_burgeri
ENSHGLG00000017150	CPSF4	100	89.668	ENSEASG00005002487	CPSF4	100	89.668	Equus_asinus_asinus
ENSHGLG00000017150	CPSF4	100	99.526	ENSECAG00000007525	CPSF4	100	99.526	Equus_caballus
ENSHGLG00000017150	CPSF4	68	100.000	ENSEEUG00000002158	CPSF4	73	100.000	Erinaceus_europaeus
ENSHGLG00000017150	CPSF4	100	82.182	ENSELUG00000011481	cpsf4	100	80.000	Esox_lucius
ENSHGLG00000017150	CPSF4	100	99.526	ENSFCAG00000015070	CPSF4	100	99.526	Felis_catus
ENSHGLG00000017150	CPSF4	61	56.977	ENSFALG00000012906	-	100	56.977	Ficedula_albicollis
ENSHGLG00000017150	CPSF4	100	84.871	ENSFALG00000013799	CPSF4	100	83.395	Ficedula_albicollis
ENSHGLG00000017150	CPSF4	90	97.143	ENSFDAG00000014092	CPSF4	100	98.378	Fukomys_damarensis
ENSHGLG00000017150	CPSF4	100	83.026	ENSFHEG00000010880	cpsf4	100	83.026	Fundulus_heteroclitus
ENSHGLG00000017150	CPSF4	100	76.923	ENSGMOG00000002330	cpsf4	100	75.547	Gadus_morhua
ENSHGLG00000017150	CPSF4	100	84.871	ENSGALG00000004714	CPSF4	100	83.764	Gallus_gallus
ENSHGLG00000017150	CPSF4	99	38.743	ENSGALG00000004441	-	98	32.609	Gallus_gallus
ENSHGLG00000017150	CPSF4	100	82.657	ENSGAFG00000010580	cpsf4	100	82.657	Gambusia_affinis
ENSHGLG00000017150	CPSF4	100	76.923	ENSGACG00000007792	cpsf4	100	75.458	Gasterosteus_aculeatus
ENSHGLG00000017150	CPSF4	67	76.923	ENSGAGG00000020579	-	92	81.212	Gopherus_agassizii
ENSHGLG00000017150	CPSF4	100	94.465	ENSGAGG00000021835	CPSF4	100	94.465	Gopherus_agassizii
ENSHGLG00000017150	CPSF4	100	98.578	ENSGGOG00000015131	CPSF4	100	98.578	Gorilla_gorilla
ENSHGLG00000017150	CPSF4	100	83.026	ENSHBUG00000013699	cpsf4	100	83.026	Haplochromis_burtoni
ENSHGLG00000017150	CPSF4	87	98.305	ENSHGLG00100009215	-	100	98.305	Heterocephalus_glaber_male
ENSHGLG00000017150	CPSF4	100	71.090	ENSHGLG00100017302	-	100	68.720	Heterocephalus_glaber_male
ENSHGLG00000017150	CPSF4	100	80.812	ENSHCOG00000004397	cpsf4	100	80.812	Hippocampus_comes
ENSHGLG00000017150	CPSF4	100	83.516	ENSIPUG00000017147	cpsf4	100	84.249	Ictalurus_punctatus
ENSHGLG00000017150	CPSF4	100	99.526	ENSSTOG00000001688	CPSF4	100	99.526	Ictidomys_tridecemlineatus
ENSHGLG00000017150	CPSF4	100	99.052	ENSJJAG00000019426	Cpsf4	100	99.052	Jaculus_jaculus
ENSHGLG00000017150	CPSF4	100	81.550	ENSKMAG00000015642	cpsf4	100	81.550	Kryptolebias_marmoratus
ENSHGLG00000017150	CPSF4	100	87.500	ENSLACG00000010938	CPSF4	100	87.500	Latimeria_chalumnae
ENSHGLG00000017150	CPSF4	100	60.662	ENSLACG00000018470	-	100	59.926	Latimeria_chalumnae
ENSHGLG00000017150	CPSF4	100	88.192	ENSLOCG00000004814	cpsf4	100	88.192	Lepisosteus_oculatus
ENSHGLG00000017150	CPSF4	100	97.786	ENSLAFG00000000159	CPSF4	100	98.137	Loxodonta_africana
ENSHGLG00000017150	CPSF4	100	98.578	ENSMFAG00000001462	CPSF4	100	98.578	Macaca_fascicularis
ENSHGLG00000017150	CPSF4	100	98.578	ENSMMUG00000019191	CPSF4	100	98.578	Macaca_mulatta
ENSHGLG00000017150	CPSF4	100	98.578	ENSMNEG00000032306	CPSF4	100	98.578	Macaca_nemestrina
ENSHGLG00000017150	CPSF4	100	98.578	ENSMLEG00000034721	CPSF4	100	98.578	Mandrillus_leucophaeus
ENSHGLG00000017150	CPSF4	100	83.395	ENSMAMG00000006244	cpsf4	100	82.418	Mastacembelus_armatus
ENSHGLG00000017150	CPSF4	100	83.026	ENSMZEG00005007515	cpsf4	100	83.026	Maylandia_zebra
ENSHGLG00000017150	CPSF4	87	83.122	ENSMGAG00000004235	CPSF4	100	81.857	Meleagris_gallopavo
ENSHGLG00000017150	CPSF4	100	99.526	ENSMAUG00000021253	Cpsf4	100	99.526	Mesocricetus_auratus
ENSHGLG00000017150	CPSF4	100	98.578	ENSMICG00000017429	CPSF4	100	98.578	Microcebus_murinus
ENSHGLG00000017150	CPSF4	100	99.526	ENSMOCG00000014901	Cpsf4	100	99.526	Microtus_ochrogaster
ENSHGLG00000017150	CPSF4	100	84.360	ENSMMOG00000001813	cpsf4	100	83.395	Mola_mola
ENSHGLG00000017150	CPSF4	100	95.203	ENSMODG00000001367	CPSF4	100	95.203	Monodelphis_domestica
ENSHGLG00000017150	CPSF4	100	82.288	ENSMALG00000012611	cpsf4	100	82.288	Monopterus_albus
ENSHGLG00000017150	CPSF4	100	99.526	MGP_CAROLIEiJ_G0028012	Cpsf4	100	99.526	Mus_caroli
ENSHGLG00000017150	CPSF4	100	99.526	ENSMUSG00000029625	Cpsf4	100	99.526	Mus_musculus
ENSHGLG00000017150	CPSF4	100	99.526	MGP_PahariEiJ_G0024581	Cpsf4	100	99.526	Mus_pahari
ENSHGLG00000017150	CPSF4	100	99.052	MGP_SPRETEiJ_G0029013	Cpsf4	100	99.052	Mus_spretus
ENSHGLG00000017150	CPSF4	100	98.155	ENSMPUG00000016508	CPSF4	100	98.155	Mustela_putorius_furo
ENSHGLG00000017150	CPSF4	87	86.920	ENSMLUG00000010980	CPSF4	100	86.920	Myotis_lucifugus
ENSHGLG00000017150	CPSF4	100	99.052	ENSNGAG00000001567	Cpsf4	100	99.052	Nannospalax_galili
ENSHGLG00000017150	CPSF4	91	82.591	ENSNBRG00000003943	cpsf4	98	82.591	Neolamprologus_brichardi
ENSHGLG00000017150	CPSF4	100	98.578	ENSNLEG00000011074	CPSF4	100	98.578	Nomascus_leucogenys
ENSHGLG00000017150	CPSF4	100	95.203	ENSMEUG00000006955	CPSF4	100	95.203	Notamacropus_eugenii
ENSHGLG00000017150	CPSF4	100	97.417	ENSOPRG00000013663	CPSF4	100	97.417	Ochotona_princeps
ENSHGLG00000017150	CPSF4	100	99.526	ENSODEG00000011181	-	100	99.526	Octodon_degus
ENSHGLG00000017150	CPSF4	100	73.455	ENSODEG00000009779	-	100	73.455	Octodon_degus
ENSHGLG00000017150	CPSF4	98	78.302	ENSODEG00000018283	-	89	78.302	Octodon_degus
ENSHGLG00000017150	CPSF4	100	83.026	ENSONIG00000008495	cpsf4	100	83.026	Oreochromis_niloticus
ENSHGLG00000017150	CPSF4	87	93.249	ENSOANG00000007729	CPSF4	100	93.249	Ornithorhynchus_anatinus
ENSHGLG00000017150	CPSF4	100	55.036	ENSOANG00000009568	-	100	53.047	Ornithorhynchus_anatinus
ENSHGLG00000017150	CPSF4	100	98.155	ENSOCUG00000002437	CPSF4	70	98.155	Oryctolagus_cuniculus
ENSHGLG00000017150	CPSF4	100	82.288	ENSORLG00000022798	cpsf4	100	82.288	Oryzias_latipes
ENSHGLG00000017150	CPSF4	100	82.288	ENSORLG00020008548	cpsf4	100	82.288	Oryzias_latipes_hni
ENSHGLG00000017150	CPSF4	100	81.919	ENSORLG00015019575	cpsf4	100	81.919	Oryzias_latipes_hsok
ENSHGLG00000017150	CPSF4	100	83.412	ENSOMEG00000005176	cpsf4	100	83.412	Oryzias_melastigma
ENSHGLG00000017150	CPSF4	100	97.786	ENSOGAG00000010884	CPSF4	100	97.786	Otolemur_garnettii
ENSHGLG00000017150	CPSF4	100	86.182	ENSOARG00000018668	CPSF4	100	85.455	Ovis_aries
ENSHGLG00000017150	CPSF4	100	98.104	ENSPPAG00000043355	CPSF4	100	98.104	Pan_paniscus
ENSHGLG00000017150	CPSF4	100	99.526	ENSPPRG00000003134	CPSF4	100	99.526	Panthera_pardus
ENSHGLG00000017150	CPSF4	90	97.541	ENSPTIG00000005604	CPSF4	90	97.541	Panthera_tigris_altaica
ENSHGLG00000017150	CPSF4	100	98.104	ENSPTRG00000019453	CPSF4	100	98.104	Pan_troglodytes
ENSHGLG00000017150	CPSF4	100	98.578	ENSPANG00000023123	CPSF4	100	98.578	Papio_anubis
ENSHGLG00000017150	CPSF4	100	83.636	ENSPKIG00000014278	cpsf4	100	83.636	Paramormyrops_kingsleyae
ENSHGLG00000017150	CPSF4	81	58.371	ENSPSIG00000018198	-	100	57.727	Pelodiscus_sinensis
ENSHGLG00000017150	CPSF4	80	93.578	ENSPSIG00000011229	CPSF4	100	93.578	Pelodiscus_sinensis
ENSHGLG00000017150	CPSF4	100	73.063	ENSPMGG00000017735	cpsf4	100	71.062	Periophthalmus_magnuspinnatus
ENSHGLG00000017150	CPSF4	100	99.526	ENSPEMG00000004508	Cpsf4	100	99.526	Peromyscus_maniculatus_bairdii
ENSHGLG00000017150	CPSF4	100	95.203	ENSPCIG00000024776	CPSF4	100	95.203	Phascolarctos_cinereus
ENSHGLG00000017150	CPSF4	100	82.657	ENSPFOG00000014912	cpsf4	100	82.657	Poecilia_formosa
ENSHGLG00000017150	CPSF4	100	74.539	ENSPLAG00000009599	cpsf4	100	75.277	Poecilia_latipinna
ENSHGLG00000017150	CPSF4	100	82.657	ENSPMEG00000009790	cpsf4	100	82.657	Poecilia_mexicana
ENSHGLG00000017150	CPSF4	100	81.919	ENSPREG00000018166	cpsf4	100	81.919	Poecilia_reticulata
ENSHGLG00000017150	CPSF4	87	96.186	ENSPPYG00000017378	CPSF4	100	96.186	Pongo_abelii
ENSHGLG00000017150	CPSF4	100	97.048	ENSPCAG00000001892	CPSF4	100	97.048	Procavia_capensis
ENSHGLG00000017150	CPSF4	100	99.052	ENSPCOG00000012771	CPSF4	100	99.052	Propithecus_coquereli
ENSHGLG00000017150	CPSF4	100	91.513	ENSPVAG00000007531	CPSF4	100	91.513	Pteropus_vampyrus
ENSHGLG00000017150	CPSF4	100	83.026	ENSPNYG00000018559	cpsf4	100	83.026	Pundamilia_nyererei
ENSHGLG00000017150	CPSF4	100	86.029	ENSPNAG00000003736	cpsf4	100	86.029	Pygocentrus_nattereri
ENSHGLG00000017150	CPSF4	100	99.526	ENSRNOG00000000985	Cpsf4	100	99.526	Rattus_norvegicus
ENSHGLG00000017150	CPSF4	87	97.034	ENSRBIG00000033886	CPSF4	100	98.295	Rhinopithecus_bieti
ENSHGLG00000017150	CPSF4	100	98.578	ENSRROG00000040431	CPSF4	100	98.578	Rhinopithecus_roxellana
ENSHGLG00000017150	CPSF4	100	98.578	ENSSBOG00000020493	CPSF4	100	98.578	Saimiri_boliviensis_boliviensis
ENSHGLG00000017150	CPSF4	100	95.203	ENSSHAG00000011533	CPSF4	100	95.203	Sarcophilus_harrisii
ENSHGLG00000017150	CPSF4	100	84.838	ENSSFOG00015007883	cpsf4	100	85.560	Scleropages_formosus
ENSHGLG00000017150	CPSF4	100	78.229	ENSSMAG00000006374	cpsf4	100	77.122	Scophthalmus_maximus
ENSHGLG00000017150	CPSF4	100	83.026	ENSSDUG00000018887	cpsf4	100	83.026	Seriola_dumerili
ENSHGLG00000017150	CPSF4	100	83.026	ENSSLDG00000019078	cpsf4	100	83.026	Seriola_lalandi_dorsalis
ENSHGLG00000017150	CPSF4	87	97.458	ENSSARG00000012416	CPSF4	100	97.458	Sorex_araneus
ENSHGLG00000017150	CPSF4	100	92.251	ENSSPUG00000003549	CPSF4	100	92.251	Sphenodon_punctatus
ENSHGLG00000017150	CPSF4	96	59.615	ENSSPUG00000014803	-	97	60.000	Sphenodon_punctatus
ENSHGLG00000017150	CPSF4	100	78.967	ENSSPAG00000006174	cpsf4	100	76.384	Stegastes_partitus
ENSHGLG00000017150	CPSF4	100	89.299	ENSSSCG00000026896	CPSF4	100	89.299	Sus_scrofa
ENSHGLG00000017150	CPSF4	100	83.883	ENSTGUG00000007552	CPSF4	100	82.418	Taeniopygia_guttata
ENSHGLG00000017150	CPSF4	100	80.657	ENSTRUG00000024220	cpsf4	100	80.657	Takifugu_rubripes
ENSHGLG00000017150	CPSF4	100	79.705	ENSTNIG00000006265	cpsf4	100	81.181	Tetraodon_nigroviridis
ENSHGLG00000017150	CPSF4	87	87.712	ENSTBEG00000011406	CPSF4	100	87.712	Tupaia_belangeri
ENSHGLG00000017150	CPSF4	100	77.860	ENSTTRG00000003007	CPSF4	100	77.860	Tursiops_truncatus
ENSHGLG00000017150	CPSF4	92	88.353	ENSUAMG00000008051	CPSF4	85	86.345	Ursus_americanus
ENSHGLG00000017150	CPSF4	100	89.299	ENSUMAG00000009474	CPSF4	100	89.299	Ursus_maritimus
ENSHGLG00000017150	CPSF4	100	89.299	ENSVVUG00000008824	CPSF4	100	89.299	Vulpes_vulpes
ENSHGLG00000017150	CPSF4	99	60.370	ENSXETG00000004641	cpsf4l	99	58.781	Xenopus_tropicalis
ENSHGLG00000017150	CPSF4	100	87.189	ENSXETG00000009892	cpsf4	100	87.189	Xenopus_tropicalis
ENSHGLG00000017150	CPSF4	100	83.886	ENSXCOG00000016040	cpsf4	100	83.886	Xiphophorus_couchianus
ENSHGLG00000017150	CPSF4	100	82.657	ENSXMAG00000024670	cpsf4	100	82.657	Xiphophorus_maculatus