EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000017315 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3F-like
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 54355 bases
Position: chrJH602065.1:9172716-9227070
Accession: 101722862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000024292	APOBEC_N	PF08210.11	1.6e-100	1	2
ENSHGLP00000024292	APOBEC_N	PF08210.11	1.6e-100	2	2
ENSHGLP00000024290	APOBEC_N	PF08210.11	8.3e-83	1	2
ENSHGLP00000024290	APOBEC_N	PF08210.11	8.3e-83	2	2
ENSHGLP00000024291	APOBEC_N	PF08210.11	2.3e-82	1	2
ENSHGLP00000024291	APOBEC_N	PF08210.11	2.3e-82	2	2
ENSHGLP00000024291	APOBEC_C	PF05240.14	1.7e-53	1	2
ENSHGLP00000024291	APOBEC_C	PF05240.14	1.7e-53	2	2
ENSHGLP00000024290	APOBEC_C	PF05240.14	2.5e-53	1	2
ENSHGLP00000024290	APOBEC_C	PF05240.14	2.5e-53	2	2
ENSHGLP00000024292	APOBEC_C	PF05240.14	8.3e-47	1	2
ENSHGLP00000024292	APOBEC_C	PF05240.14	8.3e-47	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000024511	-	1412	XM_013072541	ENSHGLP00000024292	441 (aa)	XP_012927995	-
ENSHGLT00000024510	-	1476	-	ENSHGLP00000024291	415 (aa)	-	-
ENSHGLT00000024509	-	1476	-	ENSHGLP00000024290	415 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000017315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000017315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000017315	-	84	34.615	ENSHGLG00000017169	APOBEC2	79	35.676
ENSHGLG00000017315	-	89	39.801	ENSHGLG00000001443	AICDA	100	39.409
ENSHGLG00000017315	-	62	39.695	ENSHGLG00000001495	APOBEC1	55	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000017315	-	91	46.237	ENSG00000128394	APOBEC3F	99	46.237	Homo_sapiens
ENSHGLG00000017315	-	91	42.119	ENSG00000243811	APOBEC3D	98	45.213	Homo_sapiens
ENSHGLG00000017315	-	85	43.316	ENSG00000244509	APOBEC3C	98	45.213	Homo_sapiens
ENSHGLG00000017315	-	92	45.078	ENSANAG00000030088	-	97	45.078	Aotus_nancymaae
ENSHGLG00000017315	-	60	49.600	ENSCJAG00000015317	-	100	48.819	Callithrix_jacchus
ENSHGLG00000017315	-	82	44.385	ENSCAFG00020002615	-	98	44.385	Canis_lupus_dingo
ENSHGLG00000017315	-	81	48.370	ENSTSYG00000028254	-	99	48.370	Carlito_syrichta
ENSHGLG00000017315	-	82	43.478	ENSTSYG00000030036	-	99	43.478	Carlito_syrichta
ENSHGLG00000017315	-	87	41.530	ENSTSYG00000034260	-	98	44.565	Carlito_syrichta
ENSHGLG00000017315	-	85	44.086	ENSCCAG00000030932	-	90	44.385	Cebus_capucinus
ENSHGLG00000017315	-	83	46.032	ENSCATG00000043226	APOBEC3C	98	46.032	Cercocebus_atys
ENSHGLG00000017315	-	94	44.706	ENSCATG00000033502	-	99	44.706	Cercocebus_atys
ENSHGLG00000017315	-	90	44.086	ENSCSAG00000006382	APOBEC3F	100	44.086	Chlorocebus_sabaeus
ENSHGLG00000017315	-	85	43.850	ENSCSAG00000006402	APOBEC3C	98	44.974	Chlorocebus_sabaeus
ENSHGLG00000017315	-	91	44.624	ENSCANG00000032904	-	99	44.624	Colobus_angolensis_palliatus
ENSHGLG00000017315	-	91	45.161	ENSCANG00000031957	-	100	45.161	Colobus_angolensis_palliatus
ENSHGLG00000017315	-	91	40.217	ENSCANG00000033269	-	100	43.333	Colobus_angolensis_palliatus
ENSHGLG00000017315	-	84	44.565	ENSCANG00000039177	APOBEC3C	98	45.989	Colobus_angolensis_palliatus
ENSHGLG00000017315	-	86	38.251	ENSDNOG00000044642	-	99	38.251	Dasypus_novemcinctus
ENSHGLG00000017315	-	88	38.835	ENSEASG00005018641	-	99	40.097	Equus_asinus_asinus
ENSHGLG00000017315	-	92	42.473	ENSECAG00000006071	-	100	42.473	Equus_caballus
ENSHGLG00000017315	-	91	46.237	ENSGGOG00000038678	APOBEC3F	99	46.237	Gorilla_gorilla
ENSHGLG00000017315	-	83	45.745	ENSGGOG00000036587	-	98	45.745	Gorilla_gorilla
ENSHGLG00000017315	-	99	98.972	ENSHGLG00100003105	-	99	98.972	Heterocephalus_glaber_male
ENSHGLG00000017315	-	91	43.011	ENSMFAG00000004037	APOBEC3F	99	43.011	Macaca_fascicularis
ENSHGLG00000017315	-	87	43.915	ENSMFAG00000016792	APOBEC3C	98	43.915	Macaca_fascicularis
ENSHGLG00000017315	-	95	47.150	ENSMFAG00000002331	-	99	47.150	Macaca_fascicularis
ENSHGLG00000017315	-	84	43.169	ENSMMUG00000004018	APOBEC3C	95	43.784	Macaca_mulatta
ENSHGLG00000017315	-	94	43.478	ENSMMUG00000004017	APOBEC3F	99	44.565	Macaca_mulatta
ENSHGLG00000017315	-	95	47.150	ENSMNEG00000043316	APOBEC3D	99	47.150	Macaca_nemestrina
ENSHGLG00000017315	-	85	43.784	ENSMNEG00000045196	APOBEC3C	98	44.385	Macaca_nemestrina
ENSHGLG00000017315	-	87	43.548	ENSMLEG00000036992	APOBEC3C	98	46.032	Mandrillus_leucophaeus
ENSHGLG00000017315	-	91	42.473	ENSMLEG00000029642	APOBEC3F	99	42.473	Mandrillus_leucophaeus
ENSHGLG00000017315	-	91	41.827	ENSMICG00000042615	-	100	43.333	Microcebus_murinus
ENSHGLG00000017315	-	90	42.157	ENSMLUG00000023676	-	99	44.681	Myotis_lucifugus
ENSHGLG00000017315	-	92	41.667	ENSNLEG00000035811	-	99	41.667	Nomascus_leucogenys
ENSHGLG00000017315	-	85	45.405	ENSNLEG00000028392	APOBEC3C	98	45.161	Nomascus_leucogenys
ENSHGLG00000017315	-	94	43.617	ENSOGAG00000032498	-	100	43.617	Otolemur_garnettii
ENSHGLG00000017315	-	90	38.587	ENSOGAG00000030300	-	98	38.587	Otolemur_garnettii
ENSHGLG00000017315	-	93	40.659	ENSOGAG00000033404	-	99	40.659	Otolemur_garnettii
ENSHGLG00000017315	-	92	44.086	ENSPPAG00000028218	-	98	44.149	Pan_paniscus
ENSHGLG00000017315	-	85	43.316	ENSPPAG00000014118	APOBEC3C	98	45.213	Pan_paniscus
ENSHGLG00000017315	-	86	42.553	ENSPPRG00000003726	-	98	42.553	Panthera_pardus
ENSHGLG00000017315	-	91	46.774	ENSPTRG00000014385	APOBEC3C	99	46.774	Pan_troglodytes
ENSHGLG00000017315	-	92	41.146	ENSPTRG00000041588	APOBEC3D	99	44.000	Pan_troglodytes
ENSHGLG00000017315	-	95	42.487	ENSPANG00000010775	APOBEC3F	98	45.503	Papio_anubis
ENSHGLG00000017315	-	85	45.989	ENSPPYG00000011832	APOBEC3C	98	45.989	Pongo_abelii
ENSHGLG00000017315	-	61	42.636	ENSPCOG00000022067	-	98	44.615	Propithecus_coquereli
ENSHGLG00000017315	-	63	43.066	ENSPCOG00000018072	-	100	43.066	Propithecus_coquereli
ENSHGLG00000017315	-	76	43.820	ENSPVAG00000009461	-	72	43.820	Pteropus_vampyrus
ENSHGLG00000017315	-	83	43.429	ENSRBIG00000042297	-	99	43.429	Rhinopithecus_bieti
ENSHGLG00000017315	-	94	42.473	ENSRBIG00000030834	-	99	42.473	Rhinopithecus_bieti
ENSHGLG00000017315	-	90	43.548	ENSRBIG00000030323	-	98	48.128	Rhinopithecus_bieti
ENSHGLG00000017315	-	91	43.548	ENSRROG00000029045	APOBEC3C	98	48.128	Rhinopithecus_roxellana
ENSHGLG00000017315	-	83	43.931	ENSRROG00000029996	-	99	43.931	Rhinopithecus_roxellana
ENSHGLG00000017315	-	94	43.817	ENSRROG00000028557	-	99	43.817	Rhinopithecus_roxellana
ENSHGLG00000017315	-	87	44.865	ENSSBOG00000032780	-	100	44.865	Saimiri_boliviensis_boliviensis
ENSHGLG00000017315	-	85	42.458	ENSUAMG00000004433	-	100	44.586	Ursus_americanus
ENSHGLG00000017315	-	89	40.580	ENSUMAG00000014441	-	98	40.580	Ursus_maritimus
ENSHGLG00000017315	-	67	46.980	ENSVVUG00000014628	-	91	48.630	Vulpes_vulpes