EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000017390 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 23858 bases
Position: chrJH602043.1:63218107-63241964
Accession: 101726054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000024394	MMR_HSR1	PF01926.23	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000024615	LSG1-201	1899	XM_004834754	ENSHGLP00000024394	632 (aa)	XP_004834811	-

Gene Model

Click here to download ENSHGLG00000017390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000017390's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000017390	LSG1	100	76.657	ENSG00000041802	LSG1	98	88.506	Homo_sapiens
ENSHGLG00000017390	LSG1	99	63.608	ENSAPOG00000009694	lsg1	99	63.465	Acanthochromis_polyacanthus
ENSHGLG00000017390	LSG1	99	74.510	ENSAMEG00000009343	LSG1	99	75.113	Ailuropoda_melanoleuca
ENSHGLG00000017390	LSG1	98	63.854	ENSACIG00000012406	lsg1	99	64.050	Amphilophus_citrinellus
ENSHGLG00000017390	LSG1	99	63.199	ENSAOCG00000016066	lsg1	99	63.199	Amphiprion_ocellaris
ENSHGLG00000017390	LSG1	99	63.665	ENSAPEG00000003252	lsg1	99	63.199	Amphiprion_percula
ENSHGLG00000017390	LSG1	98	63.565	ENSATEG00000011794	lsg1	99	63.495	Anabas_testudineus
ENSHGLG00000017390	LSG1	94	63.593	ENSACAG00000004222	LSG1	99	62.780	Anolis_carolinensis
ENSHGLG00000017390	LSG1	100	76.471	ENSANAG00000021153	LSG1	100	76.621	Aotus_nancymaae
ENSHGLG00000017390	LSG1	99	62.387	ENSACLG00000000520	lsg1	99	62.006	Astatotilapia_calliptera
ENSHGLG00000017390	LSG1	99	63.142	ENSAMXG00000008271	lsg1	99	63.650	Astyanax_mexicanus
ENSHGLG00000017390	LSG1	100	75.189	ENSBTAG00000008461	LSG1	100	75.684	Bos_taurus
ENSHGLG00000017390	LSG1	82	41.635	WBGene00016907	C53H9.2	80	50.495	Caenorhabditis_elegans
ENSHGLG00000017390	LSG1	100	76.169	ENSCJAG00000013962	LSG1	100	76.320	Callithrix_jacchus
ENSHGLG00000017390	LSG1	95	75.079	ENSCAFG00000013445	LSG1	99	75.119	Canis_familiaris
ENSHGLG00000017390	LSG1	99	74.661	ENSCAFG00020002216	LSG1	99	75.240	Canis_lupus_dingo
ENSHGLG00000017390	LSG1	99	77.846	ENSCHIG00000015769	LSG1	99	77.231	Capra_hircus
ENSHGLG00000017390	LSG1	100	76.355	ENSTSYG00000001447	LSG1	100	76.391	Carlito_syrichta
ENSHGLG00000017390	LSG1	95	79.167	ENSCAPG00000009856	LSG1	100	77.258	Cavia_aperea
ENSHGLG00000017390	LSG1	100	76.923	ENSCCAG00000035744	LSG1	100	76.169	Cebus_capucinus
ENSHGLG00000017390	LSG1	100	76.923	ENSCATG00000042060	LSG1	100	75.904	Cercocebus_atys
ENSHGLG00000017390	LSG1	100	76.923	ENSCSAG00000008796	LSG1	92	77.225	Chlorocebus_sabaeus
ENSHGLG00000017390	LSG1	99	64.275	ENSCPBG00000015941	LSG1	83	64.574	Chrysemys_picta_bellii
ENSHGLG00000017390	LSG1	83	49.905	ENSCING00000007079	-	99	49.715	Ciona_intestinalis
ENSHGLG00000017390	LSG1	84	50.844	ENSCSAVG00000002514	-	99	50.094	Ciona_savignyi
ENSHGLG00000017390	LSG1	100	76.506	ENSCANG00000030709	LSG1	100	76.772	Colobus_angolensis_palliatus
ENSHGLG00000017390	LSG1	100	78.694	ENSCGRG00001019846	Lsg1	100	79.005	Cricetulus_griseus_chok1gshd
ENSHGLG00000017390	LSG1	100	78.407	ENSCGRG00000014617	Lsg1	100	78.714	Cricetulus_griseus_crigri
ENSHGLG00000017390	LSG1	98	63.679	ENSCSEG00000008522	lsg1	99	63.537	Cynoglossus_semilaevis
ENSHGLG00000017390	LSG1	97	64.593	ENSCVAG00000002484	lsg1	99	65.884	Cyprinodon_variegatus
ENSHGLG00000017390	LSG1	99	64.885	ENSDARG00000015352	lsg1	99	65.736	Danio_rerio
ENSHGLG00000017390	LSG1	100	75.716	ENSDNOG00000006224	LSG1	100	74.320	Dasypus_novemcinctus
ENSHGLG00000017390	LSG1	99	49.452	FBgn0266284	Ns3	99	48.826	Drosophila_melanogaster
ENSHGLG00000017390	LSG1	88	89.333	ENSETEG00000003888	LSG1	89	89.333	Echinops_telfairi
ENSHGLG00000017390	LSG1	88	56.529	ENSEBUG00000003119	lsg1	85	55.938	Eptatretus_burgeri
ENSHGLG00000017390	LSG1	100	75.753	ENSEASG00005000678	LSG1	100	76.541	Equus_asinus_asinus
ENSHGLG00000017390	LSG1	100	75.753	ENSECAG00000017659	LSG1	100	76.692	Equus_caballus
ENSHGLG00000017390	LSG1	86	80.172	ENSEEUG00000015217	LSG1	87	80.172	Erinaceus_europaeus
ENSHGLG00000017390	LSG1	99	61.478	ENSELUG00000023973	lsg1	99	61.622	Esox_lucius
ENSHGLG00000017390	LSG1	99	76.471	ENSFCAG00000024957	LSG1	99	75.566	Felis_catus
ENSHGLG00000017390	LSG1	92	62.075	ENSFALG00000007210	LSG1	94	60.806	Ficedula_albicollis
ENSHGLG00000017390	LSG1	100	86.728	ENSFDAG00000017373	LSG1	100	86.265	Fukomys_damarensis
ENSHGLG00000017390	LSG1	97	62.835	ENSFHEG00000003680	lsg1	99	62.037	Fundulus_heteroclitus
ENSHGLG00000017390	LSG1	98	58.075	ENSGMOG00000015834	lsg1	86	68.775	Gadus_morhua
ENSHGLG00000017390	LSG1	99	61.319	ENSGALG00000007058	LSG1	87	61.469	Gallus_gallus
ENSHGLG00000017390	LSG1	97	65.169	ENSGAFG00000015831	lsg1	99	64.835	Gambusia_affinis
ENSHGLG00000017390	LSG1	98	61.129	ENSGACG00000009323	lsg1	99	61.146	Gasterosteus_aculeatus
ENSHGLG00000017390	LSG1	100	77.108	ENSGGOG00000000520	LSG1	100	77.376	Gorilla_gorilla
ENSHGLG00000017390	LSG1	99	62.538	ENSHBUG00000005659	lsg1	99	62.366	Haplochromis_burtoni
ENSHGLG00000017390	LSG1	100	99.684	ENSHGLG00100018587	LSG1	100	99.684	Heterocephalus_glaber_male
ENSHGLG00000017390	LSG1	97	62.853	ENSHCOG00000016848	lsg1	99	62.654	Hippocampus_comes
ENSHGLG00000017390	LSG1	99	64.142	ENSIPUG00000008631	lsg1	99	63.509	Ictalurus_punctatus
ENSHGLG00000017390	LSG1	80	84.848	ENSSTOG00000010234	LSG1	99	84.848	Ictidomys_tridecemlineatus
ENSHGLG00000017390	LSG1	100	78.615	ENSJJAG00000015513	Lsg1	100	78.428	Jaculus_jaculus
ENSHGLG00000017390	LSG1	98	63.269	ENSKMAG00000009681	lsg1	99	63.233	Kryptolebias_marmoratus
ENSHGLG00000017390	LSG1	98	62.945	ENSLBEG00000024261	lsg1	99	62.559	Labrus_bergylta
ENSHGLG00000017390	LSG1	99	62.222	ENSLACG00000013399	LSG1	99	62.874	Latimeria_chalumnae
ENSHGLG00000017390	LSG1	98	64.031	ENSLOCG00000004918	lsg1	99	63.470	Lepisosteus_oculatus
ENSHGLG00000017390	LSG1	100	76.994	ENSLAFG00000012919	-	100	76.840	Loxodonta_africana
ENSHGLG00000017390	LSG1	100	76.923	ENSMFAG00000039903	LSG1	100	75.904	Macaca_fascicularis
ENSHGLG00000017390	LSG1	100	77.074	ENSMMUG00000010708	LSG1	100	77.225	Macaca_mulatta
ENSHGLG00000017390	LSG1	100	77.074	ENSMNEG00000031538	LSG1	100	76.018	Macaca_nemestrina
ENSHGLG00000017390	LSG1	100	77.225	ENSMLEG00000041184	LSG1	100	77.376	Mandrillus_leucophaeus
ENSHGLG00000017390	LSG1	99	62.205	ENSMAMG00000000470	lsg1	99	62.205	Mastacembelus_armatus
ENSHGLG00000017390	LSG1	99	62.691	ENSMZEG00005017865	lsg1	99	62.519	Maylandia_zebra
ENSHGLG00000017390	LSG1	88	62.901	ENSMGAG00000007050	LSG1	99	62.901	Meleagris_gallopavo
ENSHGLG00000017390	LSG1	91	78.876	ENSMAUG00000016976	Lsg1	93	77.853	Mesocricetus_auratus
ENSHGLG00000017390	LSG1	100	75.643	ENSMICG00000049087	LSG1	100	74.281	Microcebus_murinus
ENSHGLG00000017390	LSG1	100	77.217	ENSMOCG00000022136	Lsg1	100	77.982	Microtus_ochrogaster
ENSHGLG00000017390	LSG1	98	63.710	ENSMMOG00000008884	lsg1	99	63.449	Mola_mola
ENSHGLG00000017390	LSG1	99	57.951	ENSMODG00000019828	LSG1	99	56.288	Monodelphis_domestica
ENSHGLG00000017390	LSG1	100	76.263	MGP_CAROLIEiJ_G0020648	Lsg1	100	77.966	Mus_caroli
ENSHGLG00000017390	LSG1	100	76.947	ENSMUSG00000022538	Lsg1	100	78.120	Mus_musculus
ENSHGLG00000017390	LSG1	98	78.383	MGP_PahariEiJ_G0016352	Lsg1	100	77.829	Mus_pahari
ENSHGLG00000017390	LSG1	100	76.380	MGP_SPRETEiJ_G0021544	Lsg1	100	78.274	Mus_spretus
ENSHGLG00000017390	LSG1	99	76.355	ENSMPUG00000003734	LSG1	99	75.602	Mustela_putorius_furo
ENSHGLG00000017390	LSG1	99	76.524	ENSMLUG00000012548	LSG1	99	77.744	Myotis_lucifugus
ENSHGLG00000017390	LSG1	100	76.852	ENSNGAG00000021872	Lsg1	100	75.457	Nannospalax_galili
ENSHGLG00000017390	LSG1	100	77.225	ENSNLEG00000008293	LSG1	100	76.621	Nomascus_leucogenys
ENSHGLG00000017390	LSG1	71	69.072	ENSMEUG00000009041	-	81	69.072	Notamacropus_eugenii
ENSHGLG00000017390	LSG1	99	62.727	ENSONIG00000002635	lsg1	99	61.927	Oreochromis_niloticus
ENSHGLG00000017390	LSG1	95	71.290	ENSOANG00000012742	LSG1	99	70.323	Ornithorhynchus_anatinus
ENSHGLG00000017390	LSG1	100	79.819	ENSOCUG00000004817	LSG1	100	78.797	Oryctolagus_cuniculus
ENSHGLG00000017390	LSG1	98	63.916	ENSORLG00000007695	lsg1	99	63.708	Oryzias_latipes
ENSHGLG00000017390	LSG1	98	63.563	ENSORLG00020016286	lsg1	99	63.208	Oryzias_latipes_hni
ENSHGLG00000017390	LSG1	98	63.916	ENSORLG00015012025	lsg1	99	63.233	Oryzias_latipes_hsok
ENSHGLG00000017390	LSG1	98	64.355	ENSOMEG00000022379	lsg1	99	63.507	Oryzias_melastigma
ENSHGLG00000017390	LSG1	100	75.826	ENSOGAG00000003475	LSG1	100	75.676	Otolemur_garnettii
ENSHGLG00000017390	LSG1	99	75.038	ENSOARG00000020403	LSG1	99	74.772	Ovis_aries
ENSHGLG00000017390	LSG1	100	77.828	ENSPPAG00000029271	LSG1	100	77.225	Pan_paniscus
ENSHGLG00000017390	LSG1	99	76.532	ENSPPRG00000010281	LSG1	99	75.635	Panthera_pardus
ENSHGLG00000017390	LSG1	99	76.772	ENSPTIG00000010789	LSG1	99	75.867	Panthera_tigris_altaica
ENSHGLG00000017390	LSG1	100	77.677	ENSPTRG00000015760	LSG1	100	77.074	Pan_troglodytes
ENSHGLG00000017390	LSG1	100	77.677	ENSPANG00000018249	LSG1	100	76.657	Papio_anubis
ENSHGLG00000017390	LSG1	97	63.565	ENSPKIG00000002895	lsg1	100	62.364	Paramormyrops_kingsleyae
ENSHGLG00000017390	LSG1	96	62.928	ENSPSIG00000009821	LSG1	99	62.871	Pelodiscus_sinensis
ENSHGLG00000017390	LSG1	95	63.844	ENSPMGG00000000931	lsg1	99	63.727	Periophthalmus_magnuspinnatus
ENSHGLG00000017390	LSG1	100	77.252	ENSPEMG00000012082	-	100	77.252	Peromyscus_maniculatus_bairdii
ENSHGLG00000017390	LSG1	99	59.463	ENSPMAG00000007451	lsg1	99	58.702	Petromyzon_marinus
ENSHGLG00000017390	LSG1	99	63.861	ENSPCIG00000013890	LSG1	84	63.861	Phascolarctos_cinereus
ENSHGLG00000017390	LSG1	97	64.818	ENSPFOG00000021882	lsg1	99	63.945	Poecilia_formosa
ENSHGLG00000017390	LSG1	97	64.342	ENSPLAG00000019536	lsg1	99	63.482	Poecilia_latipinna
ENSHGLG00000017390	LSG1	97	63.981	ENSPMEG00000017281	lsg1	99	63.134	Poecilia_mexicana
ENSHGLG00000017390	LSG1	97	54.250	ENSPREG00000006048	lsg1	99	54.338	Poecilia_reticulata
ENSHGLG00000017390	LSG1	92	75.450	ENSPPYG00000014425	LSG1	100	74.754	Pongo_abelii
ENSHGLG00000017390	LSG1	89	89.333	ENSPCAG00000005511	LSG1	70	89.333	Procavia_capensis
ENSHGLG00000017390	LSG1	100	76.054	ENSPCOG00000012360	LSG1	100	76.090	Propithecus_coquereli
ENSHGLG00000017390	LSG1	99	62.236	ENSPNYG00000021994	lsg1	99	61.854	Pundamilia_nyererei
ENSHGLG00000017390	LSG1	99	63.678	ENSPNAG00000015533	lsg1	99	63.735	Pygocentrus_nattereri
ENSHGLG00000017390	LSG1	100	77.727	ENSRNOG00000001727	Lsg1	100	78.333	Rattus_norvegicus
ENSHGLG00000017390	LSG1	100	77.039	ENSRBIG00000029053	LSG1	100	76.284	Rhinopithecus_bieti
ENSHGLG00000017390	LSG1	100	77.039	ENSRROG00000037702	LSG1	100	76.284	Rhinopithecus_roxellana
ENSHGLG00000017390	LSG1	65	55.952	YGL099W	LSG1	65	55.952	Saccharomyces_cerevisiae
ENSHGLG00000017390	LSG1	100	76.471	ENSSBOG00000034938	LSG1	100	76.772	Saimiri_boliviensis_boliviensis
ENSHGLG00000017390	LSG1	77	62.830	ENSSHAG00000003487	LSG1	99	62.476	Sarcophilus_harrisii
ENSHGLG00000017390	LSG1	98	63.551	ENSSFOG00015008955	lsg1	99	63.919	Scleropages_formosus
ENSHGLG00000017390	LSG1	98	63.509	ENSSDUG00000004622	lsg1	99	62.443	Seriola_dumerili
ENSHGLG00000017390	LSG1	98	64.696	ENSSLDG00000010869	lsg1	99	63.850	Seriola_lalandi_dorsalis
ENSHGLG00000017390	LSG1	83	77.126	ENSSARG00000012981	LSG1	84	75.487	Sorex_araneus
ENSHGLG00000017390	LSG1	99	66.163	ENSSPUG00000016347	LSG1	99	65.106	Sphenodon_punctatus
ENSHGLG00000017390	LSG1	99	64.196	ENSSPAG00000005508	lsg1	99	63.722	Stegastes_partitus
ENSHGLG00000017390	LSG1	99	75.809	ENSSSCG00000011827	LSG1	99	75.809	Sus_scrofa
ENSHGLG00000017390	LSG1	88	60.596	ENSTGUG00000009068	LSG1	99	61.398	Taeniopygia_guttata
ENSHGLG00000017390	LSG1	97	59.618	ENSTRUG00000017380	lsg1	99	59.380	Takifugu_rubripes
ENSHGLG00000017390	LSG1	97	63.981	ENSTNIG00000015570	lsg1	99	64.297	Tetraodon_nigroviridis
ENSHGLG00000017390	LSG1	99	70.136	ENSTTRG00000000559	LSG1	99	68.892	Tursiops_truncatus
ENSHGLG00000017390	LSG1	99	76.205	ENSUAMG00000012454	LSG1	99	75.452	Ursus_americanus
ENSHGLG00000017390	LSG1	99	76.205	ENSUMAG00000000855	LSG1	99	75.452	Ursus_maritimus
ENSHGLG00000017390	LSG1	95	70.476	ENSVPAG00000012400	LSG1	99	66.875	Vicugna_pacos
ENSHGLG00000017390	LSG1	95	74.841	ENSVVUG00000008956	LSG1	97	75.040	Vulpes_vulpes
ENSHGLG00000017390	LSG1	99	63.914	ENSXETG00000003451	lsg1	99	64.386	Xenopus_tropicalis
ENSHGLG00000017390	LSG1	97	63.150	ENSXCOG00000003239	lsg1	99	62.809	Xiphophorus_couchianus
ENSHGLG00000017390	LSG1	97	64.251	ENSXMAG00000005536	lsg1	99	63.422	Xiphophorus_maculatus