EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000017457 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 2877 bases
Position: chrJH602046.1:19840056-19842932
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000024492	PAP_RNA-bind	PF04926.15	9.9e-25	1	2
ENSHGLP00000024492	PAP_RNA-bind	PF04926.15	9.9e-25	2	2
ENSHGLP00000024494	PAP_RNA-bind	PF04926.15	9.8e-23	1	2
ENSHGLP00000024494	PAP_RNA-bind	PF04926.15	9.8e-23	2	2
ENSHGLP00000024493	PAP_RNA-bind	PF04926.15	1.1e-22	1	2
ENSHGLP00000024493	PAP_RNA-bind	PF04926.15	1.1e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000024715	-	2016	-	ENSHGLP00000024494	671 (aa)	-	-
ENSHGLT00000024714	-	2058	-	ENSHGLP00000024493	685 (aa)	-	-
ENSHGLT00000024713	-	1722	-	ENSHGLP00000024492	573 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000017457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000017457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000017457	-	91	72.029	ENSHGLG00000002987	-	96	72.679
ENSHGLG00000017457	-	92	60.764	ENSHGLG00000019610	PAPOLG	99	53.369
ENSHGLG00000017457	-	100	85.831	ENSHGLG00000007909	-	99	86.785
ENSHGLG00000017457	-	100	73.538	ENSHGLG00000007467	-	99	75.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000017457	-	100	84.324	ENSG00000090060	PAPOLA	100	85.684	Homo_sapiens
ENSHGLG00000017457	-	100	84.647	ENSAMEG00000014142	PAPOLA	99	85.326	Ailuropoda_melanoleuca
ENSHGLG00000017457	-	100	78.668	ENSAPLG00000006645	PAPOLA	99	79.212	Anas_platyrhynchos
ENSHGLG00000017457	-	98	78.976	ENSACAG00000013474	PAPOLA	99	81.748	Anolis_carolinensis
ENSHGLG00000017457	-	100	84.189	ENSANAG00000018274	PAPOLA	99	85.424	Aotus_nancymaae
ENSHGLG00000017457	-	82	80.347	ENSANAG00000027941	-	98	81.118	Aotus_nancymaae
ENSHGLG00000017457	-	93	70.578	ENSAMXG00000018141	papola	97	75.416	Astyanax_mexicanus
ENSHGLG00000017457	-	100	84.332	ENSBTAG00000004054	PAPOLA	99	85.034	Bos_taurus
ENSHGLG00000017457	-	100	84.054	ENSCJAG00000006512	PAPOLA	100	84.522	Callithrix_jacchus
ENSHGLG00000017457	-	100	84.605	ENSCAFG00000017783	PAPOLA	99	85.286	Canis_familiaris
ENSHGLG00000017457	-	100	84.605	ENSCAFG00020011550	PAPOLA	99	85.054	Canis_lupus_dingo
ENSHGLG00000017457	-	100	84.332	ENSCHIG00000025004	-	99	85.034	Capra_hircus
ENSHGLG00000017457	-	100	83.924	ENSTSYG00000012384	PAPOLA	99	84.605	Carlito_syrichta
ENSHGLG00000017457	-	100	81.744	ENSCPOG00000002648	PAPOLA	99	82.698	Cavia_porcellus
ENSHGLG00000017457	-	100	84.189	ENSCCAG00000025120	PAPOLA	99	84.865	Cebus_capucinus
ENSHGLG00000017457	-	100	84.324	ENSCATG00000018815	PAPOLA	99	85.421	Cercocebus_atys
ENSHGLG00000017457	-	100	85.695	ENSCLAG00000016342	PAPOLA	99	86.512	Chinchilla_lanigera
ENSHGLG00000017457	-	100	84.324	ENSCSAG00000010516	PAPOLA	99	85.000	Chlorocebus_sabaeus
ENSHGLG00000017457	-	72	73.842	ENSCHOG00000001115	PAPOLA	71	73.842	Choloepus_hoffmanni
ENSHGLG00000017457	-	98	80.360	ENSCPBG00000024125	PAPOLA	99	80.000	Chrysemys_picta_bellii
ENSHGLG00000017457	-	100	79.730	ENSCANG00000000159	PAPOLA	99	80.405	Colobus_angolensis_palliatus
ENSHGLG00000017457	-	100	82.970	ENSCGRG00001022693	-	99	83.651	Cricetulus_griseus_chok1gshd
ENSHGLG00000017457	-	99	75.939	ENSCGRG00001002732	-	99	75.939	Cricetulus_griseus_chok1gshd
ENSHGLG00000017457	-	99	76.093	ENSCGRG00001000229	-	99	76.230	Cricetulus_griseus_chok1gshd
ENSHGLG00000017457	-	98	70.556	ENSCGRG00000001888	-	96	71.389	Cricetulus_griseus_crigri
ENSHGLG00000017457	-	100	82.970	ENSCGRG00000003664	-	99	83.651	Cricetulus_griseus_crigri
ENSHGLG00000017457	-	99	70.492	ENSCGRG00000000257	-	99	70.628	Cricetulus_griseus_crigri
ENSHGLG00000017457	-	83	44.118	ENSCSEG00000001841	-	87	41.484	Cynoglossus_semilaevis
ENSHGLG00000017457	-	99	64.130	ENSDARG00000009585	papola	99	63.624	Danio_rerio
ENSHGLG00000017457	-	68	77.301	ENSDORG00000013415	-	100	78.528	Dipodomys_ordii
ENSHGLG00000017457	-	100	73.699	ENSETEG00000004889	PAPOLA	99	73.973	Echinops_telfairi
ENSHGLG00000017457	-	87	73.056	ENSELUG00000018972	papola	98	61.194	Esox_lucius
ENSHGLG00000017457	-	100	85.014	ENSFCAG00000006784	PAPOLA	99	85.695	Felis_catus
ENSHGLG00000017457	-	100	76.253	ENSFALG00000002547	PAPOLA	98	76.649	Ficedula_albicollis
ENSHGLG00000017457	-	100	84.741	ENSFDAG00000010370	PAPOLA	99	85.695	Fukomys_damarensis
ENSHGLG00000017457	-	75	60.405	ENSGMOG00000010209	papola	100	60.367	Gadus_morhua
ENSHGLG00000017457	-	100	78.367	ENSGALG00000033099	PAPOLA	99	78.912	Gallus_gallus
ENSHGLG00000017457	-	74	49.020	ENSGACG00000006142	-	96	49.028	Gasterosteus_aculeatus
ENSHGLG00000017457	-	93	80.968	ENSGAGG00000020500	PAPOLA	98	80.974	Gopherus_agassizii
ENSHGLG00000017457	-	100	84.324	ENSGGOG00000006287	PAPOLA	99	85.135	Gorilla_gorilla
ENSHGLG00000017457	-	100	85.695	ENSHGLG00100017273	PAPOLA	99	86.649	Heterocephalus_glaber_male
ENSHGLG00000017457	-	97	66.504	ENSIPUG00000005919	papola	99	60.925	Ictalurus_punctatus
ENSHGLG00000017457	-	100	84.605	ENSSTOG00000011471	PAPOLA	99	85.286	Ictidomys_tridecemlineatus
ENSHGLG00000017457	-	100	83.106	ENSJJAG00000024340	Papola	99	83.379	Jaculus_jaculus
ENSHGLG00000017457	-	99	67.164	ENSLACG00000018136	PAPOLA	99	67.164	Latimeria_chalumnae
ENSHGLG00000017457	-	99	57.510	ENSLOCG00000008632	papola	99	57.973	Lepisosteus_oculatus
ENSHGLG00000017457	-	100	84.196	ENSLAFG00000000946	PAPOLA	99	85.014	Loxodonta_africana
ENSHGLG00000017457	-	100	84.324	ENSMFAG00000001792	PAPOLA	99	85.213	Macaca_fascicularis
ENSHGLG00000017457	-	100	84.324	ENSMMUG00000018610	PAPOLA	99	85.000	Macaca_mulatta
ENSHGLG00000017457	-	100	84.324	ENSMNEG00000043747	PAPOLA	99	85.000	Macaca_nemestrina
ENSHGLG00000017457	-	100	84.324	ENSMLEG00000032066	PAPOLA	99	85.000	Mandrillus_leucophaeus
ENSHGLG00000017457	-	85	77.974	ENSMGAG00000013228	-	100	78.135	Meleagris_gallopavo
ENSHGLG00000017457	-	100	82.834	ENSMAUG00000017178	Papola	99	83.515	Mesocricetus_auratus
ENSHGLG00000017457	-	100	84.741	ENSMICG00000010347	PAPOLA	99	85.422	Microcebus_murinus
ENSHGLG00000017457	-	100	82.834	ENSMOCG00000021670	Papola	99	83.106	Microtus_ochrogaster
ENSHGLG00000017457	-	100	83.356	ENSMODG00000012887	-	99	83.902	Monodelphis_domestica
ENSHGLG00000017457	-	99	71.841	ENSMODG00000001969	-	99	72.115	Monodelphis_domestica
ENSHGLG00000017457	-	100	82.289	MGP_CAROLIEiJ_G0018093	Papola	100	82.670	Mus_caroli
ENSHGLG00000017457	-	100	82.561	ENSMUSG00000021111	Papola	99	83.230	Mus_musculus
ENSHGLG00000017457	-	100	82.561	MGP_PahariEiJ_G0029850	Papola	100	83.230	Mus_pahari
ENSHGLG00000017457	-	100	82.698	MGP_SPRETEiJ_G0018943	Papola	100	83.540	Mus_spretus
ENSHGLG00000017457	-	100	84.741	ENSMPUG00000003054	PAPOLA	99	85.422	Mustela_putorius_furo
ENSHGLG00000017457	-	100	83.243	ENSMLUG00000010922	PAPOLA	99	83.787	Myotis_lucifugus
ENSHGLG00000017457	-	98	83.518	ENSNGAG00000022172	Papola	99	83.787	Nannospalax_galili
ENSHGLG00000017457	-	100	81.916	ENSNLEG00000000625	PAPOLA	99	82.726	Nomascus_leucogenys
ENSHGLG00000017457	-	70	78.788	ENSMEUG00000007831	-	73	83.065	Notamacropus_eugenii
ENSHGLG00000017457	-	97	79.749	ENSOPRG00000007625	PAPOLA	99	80.307	Ochotona_princeps
ENSHGLG00000017457	-	73	49.007	ENSONIG00000001062	-	93	48.802	Oreochromis_niloticus
ENSHGLG00000017457	-	100	77.929	ENSOANG00000013812	PAPOLA	99	79.019	Ornithorhynchus_anatinus
ENSHGLG00000017457	-	100	82.970	ENSOCUG00000011531	PAPOLA	99	83.924	Oryctolagus_cuniculus
ENSHGLG00000017457	-	100	84.490	ENSOGAG00000004611	PAPOLA	99	85.170	Otolemur_garnettii
ENSHGLG00000017457	-	100	84.196	ENSOARG00000016579	-	99	84.877	Ovis_aries
ENSHGLG00000017457	-	100	84.324	ENSPPAG00000030505	PAPOLA	99	85.135	Pan_paniscus
ENSHGLG00000017457	-	100	85.014	ENSPPRG00000008616	PAPOLA	99	85.695	Panthera_pardus
ENSHGLG00000017457	-	100	85.014	ENSPTIG00000018852	PAPOLA	99	85.695	Panthera_tigris_altaica
ENSHGLG00000017457	-	100	84.324	ENSPTRG00000006704	PAPOLA	99	85.135	Pan_troglodytes
ENSHGLG00000017457	-	100	84.324	ENSPANG00000025582	PAPOLA	99	85.000	Papio_anubis
ENSHGLG00000017457	-	94	69.360	ENSPKIG00000014471	papola	99	63.032	Paramormyrops_kingsleyae
ENSHGLG00000017457	-	98	80.913	ENSPSIG00000014157	PAPOLA	86	81.361	Pelodiscus_sinensis
ENSHGLG00000017457	-	98	83.102	ENSPEMG00000000043	Papola	99	83.379	Peromyscus_maniculatus_bairdii
ENSHGLG00000017457	-	100	82.834	ENSPCIG00000013234	PAPOLA	100	82.729	Phascolarctos_cinereus
ENSHGLG00000017457	-	100	82.027	ENSPPYG00000006128	PAPOLA	99	82.838	Pongo_abelii
ENSHGLG00000017457	-	90	78.201	ENSPCAG00000004199	PAPOLA	100	78.354	Procavia_capensis
ENSHGLG00000017457	-	100	84.562	ENSPCOG00000022117	PAPOLA	99	85.257	Propithecus_coquereli
ENSHGLG00000017457	-	100	83.515	ENSPVAG00000013925	PAPOLA	99	84.196	Pteropus_vampyrus
ENSHGLG00000017457	-	99	63.862	ENSPNAG00000010467	papola	99	63.462	Pygocentrus_nattereri
ENSHGLG00000017457	-	100	82.153	ENSRNOG00000004827	Papola	99	82.561	Rattus_norvegicus
ENSHGLG00000017457	-	100	81.216	ENSRBIG00000038490	PAPOLA	97	84.659	Rhinopithecus_bieti
ENSHGLG00000017457	-	100	84.324	ENSRROG00000025545	PAPOLA	99	85.000	Rhinopithecus_roxellana
ENSHGLG00000017457	-	100	84.189	ENSSBOG00000024061	PAPOLA	99	84.865	Saimiri_boliviensis_boliviensis
ENSHGLG00000017457	-	100	83.356	ENSSHAG00000015211	PAPOLA	99	84.038	Sarcophilus_harrisii
ENSHGLG00000017457	-	98	63.512	ENSSFOG00015004431	papola	98	75.735	Scleropages_formosus
ENSHGLG00000017457	-	74	52.061	ENSSDUG00000018247	-	71	50.936	Seriola_dumerili
ENSHGLG00000017457	-	98	79.806	ENSSPUG00000005835	PAPOLA	99	80.272	Sphenodon_punctatus
ENSHGLG00000017457	-	100	85.422	ENSSSCG00000002505	-	99	86.104	Sus_scrofa
ENSHGLG00000017457	-	100	78.912	ENSTGUG00000012687	PAPOLA	99	79.320	Taeniopygia_guttata
ENSHGLG00000017457	-	76	75.000	ENSTBEG00000000194	PAPOLA	75	75.543	Tupaia_belangeri
ENSHGLG00000017457	-	74	96.104	ENSTTRG00000005717	PAPOLA	72	96.104	Tursiops_truncatus
ENSHGLG00000017457	-	65	83.412	ENSUAMG00000025737	PAPOLA	98	84.360	Ursus_americanus
ENSHGLG00000017457	-	100	84.469	ENSVPAG00000006464	PAPOLA	99	85.014	Vicugna_pacos
ENSHGLG00000017457	-	100	84.605	ENSVVUG00000028340	PAPOLA	99	85.286	Vulpes_vulpes
ENSHGLG00000017457	-	99	72.245	ENSXETG00000013949	papola	99	72.245	Xenopus_tropicalis