EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000017574 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 402 bases
Position: chrJH602083.1:19315077-19315478
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000024649	LSM	PF01423.22	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000024871	-	339	-	ENSHGLP00000024649	112 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000017574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000017574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000017574	-	100	79.699	ENSHGLG00000005711	LSM1	100	79.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000017574	-	100	79.699	ENSG00000175324	LSM1	100	79.699	Homo_sapiens
ENSHGLG00000017574	-	93	78.182	ENSAPOG00000010833	lsm1	100	69.925	Acanthochromis_polyacanthus
ENSHGLG00000017574	-	100	79.699	ENSAMEG00000011141	LSM1	100	79.699	Ailuropoda_melanoleuca
ENSHGLG00000017574	-	55	68.831	ENSACIG00000019593	lsm1	64	68.831	Amphilophus_citrinellus
ENSHGLG00000017574	-	100	69.925	ENSAOCG00000017997	-	100	69.925	Amphiprion_ocellaris
ENSHGLG00000017574	-	100	69.925	ENSAOCG00000017096	lsm1	100	69.925	Amphiprion_ocellaris
ENSHGLG00000017574	-	100	69.925	ENSAPEG00000011669	lsm1	100	69.925	Amphiprion_percula
ENSHGLG00000017574	-	100	68.421	ENSATEG00000022266	lsm1	100	68.421	Anabas_testudineus
ENSHGLG00000017574	-	100	79.699	ENSANAG00000027785	LSM1	100	79.699	Aotus_nancymaae
ENSHGLG00000017574	-	100	68.421	ENSACLG00000011400	lsm1	100	68.421	Astatotilapia_calliptera
ENSHGLG00000017574	-	100	66.917	ENSAMXG00000005441	lsm1	100	66.917	Astyanax_mexicanus
ENSHGLG00000017574	-	100	78.947	ENSBTAG00000001612	LSM1	100	78.947	Bos_taurus
ENSHGLG00000017574	-	79	48.936	WBGene00003076	lsm-1	74	48.936	Caenorhabditis_elegans
ENSHGLG00000017574	-	100	78.947	ENSCJAG00000048015	LSM1	100	78.947	Callithrix_jacchus
ENSHGLG00000017574	-	100	79.699	ENSCAFG00000006113	LSM1	100	79.699	Canis_familiaris
ENSHGLG00000017574	-	100	79.699	ENSCAFG00020001822	LSM1	100	79.699	Canis_lupus_dingo
ENSHGLG00000017574	-	100	79.699	ENSCHIG00000013194	LSM1	100	79.699	Capra_hircus
ENSHGLG00000017574	-	100	79.699	ENSTSYG00000010394	LSM1	100	79.699	Carlito_syrichta
ENSHGLG00000017574	-	100	79.699	ENSCPOG00000032671	LSM1	100	79.699	Cavia_porcellus
ENSHGLG00000017574	-	100	79.699	ENSCCAG00000037171	LSM1	100	79.699	Cebus_capucinus
ENSHGLG00000017574	-	100	79.699	ENSCATG00000020377	LSM1	100	79.699	Cercocebus_atys
ENSHGLG00000017574	-	100	78.195	ENSCLAG00000001137	LSM1	100	78.195	Chinchilla_lanigera
ENSHGLG00000017574	-	100	79.699	ENSCSAG00000015485	LSM1	100	79.699	Chlorocebus_sabaeus
ENSHGLG00000017574	-	100	79.699	ENSCHOG00000006030	LSM1	100	79.699	Choloepus_hoffmanni
ENSHGLG00000017574	-	93	84.545	ENSCPBG00000006569	LSM1	74	84.545	Chrysemys_picta_bellii
ENSHGLG00000017574	-	75	61.616	ENSCING00000013536	-	92	57.025	Ciona_intestinalis
ENSHGLG00000017574	-	100	79.699	ENSCANG00000019173	LSM1	100	79.699	Colobus_angolensis_palliatus
ENSHGLG00000017574	-	100	78.947	ENSCGRG00001024560	-	100	78.947	Cricetulus_griseus_chok1gshd
ENSHGLG00000017574	-	79	78.723	ENSCGRG00001002259	-	82	78.723	Cricetulus_griseus_chok1gshd
ENSHGLG00000017574	-	100	78.947	ENSCGRG00000006554	-	100	78.947	Cricetulus_griseus_crigri
ENSHGLG00000017574	-	79	78.723	ENSCGRG00000013603	-	82	78.723	Cricetulus_griseus_crigri
ENSHGLG00000017574	-	100	68.421	ENSCSEG00000010570	lsm1	92	68.421	Cynoglossus_semilaevis
ENSHGLG00000017574	-	100	67.669	ENSCSEG00000008319	lsm1	92	67.669	Cynoglossus_semilaevis
ENSHGLG00000017574	-	100	67.669	ENSCVAG00000003871	lsm1	100	67.669	Cyprinodon_variegatus
ENSHGLG00000017574	-	100	66.165	ENSDARG00000043177	lsm1	100	66.165	Danio_rerio
ENSHGLG00000017574	-	100	79.699	ENSDNOG00000032911	-	100	79.699	Dasypus_novemcinctus
ENSHGLG00000017574	-	93	68.908	ENSDNOG00000046620	-	100	68.908	Dasypus_novemcinctus
ENSHGLG00000017574	-	100	79.699	ENSDNOG00000046387	-	100	79.699	Dasypus_novemcinctus
ENSHGLG00000017574	-	99	75.000	ENSDNOG00000030989	-	99	75.000	Dasypus_novemcinctus
ENSHGLG00000017574	-	100	79.699	ENSDORG00000028172	Lsm1	100	79.699	Dipodomys_ordii
ENSHGLG00000017574	-	91	57.843	FBgn0261067	LSm1	74	57.843	Drosophila_melanogaster
ENSHGLG00000017574	-	100	78.947	ENSEASG00005016677	LSM1	100	78.947	Equus_asinus_asinus
ENSHGLG00000017574	-	100	78.947	ENSECAG00000010461	LSM1	100	78.947	Equus_caballus
ENSHGLG00000017574	-	72	64.583	ENSEEUG00000015181	LSM1	97	64.583	Erinaceus_europaeus
ENSHGLG00000017574	-	100	69.173	ENSELUG00000002322	lsm1	100	69.173	Esox_lucius
ENSHGLG00000017574	-	100	66.917	ENSELUG00000023374	lsm1	100	66.917	Esox_lucius
ENSHGLG00000017574	-	100	79.699	ENSFCAG00000039335	LSM1	100	79.699	Felis_catus
ENSHGLG00000017574	-	93	85.455	ENSFALG00000006723	LSM1	93	85.455	Ficedula_albicollis
ENSHGLG00000017574	-	100	79.699	ENSFDAG00000007658	LSM1	100	79.699	Fukomys_damarensis
ENSHGLG00000017574	-	100	67.669	ENSFHEG00000009556	lsm1	100	67.669	Fundulus_heteroclitus
ENSHGLG00000017574	-	100	67.669	ENSGMOG00000016651	lsm1	98	67.669	Gadus_morhua
ENSHGLG00000017574	-	100	75.188	ENSGALG00000003245	LSM1	100	75.188	Gallus_gallus
ENSHGLG00000017574	-	100	67.669	ENSGAFG00000011355	lsm1	100	67.669	Gambusia_affinis
ENSHGLG00000017574	-	100	66.917	ENSGACG00000011763	lsm1	98	66.917	Gasterosteus_aculeatus
ENSHGLG00000017574	-	100	75.940	ENSGAGG00000024065	LSM1	100	75.940	Gopherus_agassizii
ENSHGLG00000017574	-	100	79.699	ENSGGOG00000022658	LSM1	100	79.699	Gorilla_gorilla
ENSHGLG00000017574	-	93	76.364	ENSHBUG00000010897	lsm1	100	68.421	Haplochromis_burtoni
ENSHGLG00000017574	-	100	100.000	ENSHGLG00100012152	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000017574	-	100	79.699	ENSHGLG00100017660	LSM1	100	79.699	Heterocephalus_glaber_male
ENSHGLG00000017574	-	100	68.421	ENSHCOG00000017233	lsm1	100	68.421	Hippocampus_comes
ENSHGLG00000017574	-	100	66.165	ENSIPUG00000002312	LSM1	100	66.165	Ictalurus_punctatus
ENSHGLG00000017574	-	55	75.325	ENSSTOG00000026870	LSM1	94	75.325	Ictidomys_tridecemlineatus
ENSHGLG00000017574	-	100	78.195	ENSJJAG00000014605	-	100	78.195	Jaculus_jaculus
ENSHGLG00000017574	-	100	68.421	ENSKMAG00000003016	lsm1	100	68.421	Kryptolebias_marmoratus
ENSHGLG00000017574	-	100	68.421	ENSLBEG00000022352	lsm1	100	68.421	Labrus_bergylta
ENSHGLG00000017574	-	93	80.000	ENSLACG00000010947	LSM1	91	80.000	Latimeria_chalumnae
ENSHGLG00000017574	-	100	74.436	ENSLOCG00000015149	lsm1	100	74.436	Lepisosteus_oculatus
ENSHGLG00000017574	-	100	79.699	ENSLAFG00000003534	LSM1	100	79.699	Loxodonta_africana
ENSHGLG00000017574	-	100	79.699	ENSMFAG00000032661	LSM1	100	79.699	Macaca_fascicularis
ENSHGLG00000017574	-	100	79.699	ENSMLEG00000034535	LSM1	100	79.699	Mandrillus_leucophaeus
ENSHGLG00000017574	-	100	68.421	ENSMAMG00000007464	lsm1	100	68.421	Mastacembelus_armatus
ENSHGLG00000017574	-	100	68.421	ENSMZEG00005010321	lsm1	100	68.421	Maylandia_zebra
ENSHGLG00000017574	-	100	75.188	ENSMGAG00000002125	LSM1	100	75.188	Meleagris_gallopavo
ENSHGLG00000017574	-	100	78.947	ENSMICG00000030726	LSM1	100	78.947	Microcebus_murinus
ENSHGLG00000017574	-	100	78.947	ENSMOCG00000022817	Lsm1	100	78.947	Microtus_ochrogaster
ENSHGLG00000017574	-	100	69.173	ENSMMOG00000015466	lsm1	100	69.173	Mola_mola
ENSHGLG00000017574	-	100	77.444	ENSMODG00000010732	-	100	77.444	Monodelphis_domestica
ENSHGLG00000017574	-	55	68.831	ENSMALG00000001478	lsm1	82	68.831	Monopterus_albus
ENSHGLG00000017574	-	100	79.699	MGP_CAROLIEiJ_G0030930	Lsm1	100	79.699	Mus_caroli
ENSHGLG00000017574	-	100	79.699	ENSMUSG00000037296	Lsm1	100	79.699	Mus_musculus
ENSHGLG00000017574	-	100	79.699	MGP_PahariEiJ_G0021400	Lsm1	100	79.699	Mus_pahari
ENSHGLG00000017574	-	100	79.699	MGP_SPRETEiJ_G0032049	Lsm1	100	79.699	Mus_spretus
ENSHGLG00000017574	-	100	78.947	ENSMPUG00000009883	LSM1	100	78.947	Mustela_putorius_furo
ENSHGLG00000017574	-	100	78.947	ENSMLUG00000003734	LSM1	100	78.947	Myotis_lucifugus
ENSHGLG00000017574	-	100	78.947	ENSNGAG00000003753	Lsm1	100	78.947	Nannospalax_galili
ENSHGLG00000017574	-	55	68.831	ENSNBRG00000017370	lsm1	66	68.831	Neolamprologus_brichardi
ENSHGLG00000017574	-	100	79.699	ENSNLEG00000029390	LSM1	100	79.699	Nomascus_leucogenys
ENSHGLG00000017574	-	100	77.444	ENSMEUG00000014077	LSM1	100	77.444	Notamacropus_eugenii
ENSHGLG00000017574	-	93	83.636	ENSOPRG00000000333	LSM1	94	83.636	Ochotona_princeps
ENSHGLG00000017574	-	100	79.699	ENSODEG00000004834	LSM1	100	79.699	Octodon_degus
ENSHGLG00000017574	-	100	68.421	ENSONIG00000010782	lsm1	100	68.421	Oreochromis_niloticus
ENSHGLG00000017574	-	100	76.692	ENSOANG00000003256	LSM1	100	76.692	Ornithorhynchus_anatinus
ENSHGLG00000017574	-	100	79.699	ENSOCUG00000015399	LSM1	100	79.699	Oryctolagus_cuniculus
ENSHGLG00000017574	-	100	68.421	ENSORLG00000030288	lsm1	100	68.421	Oryzias_latipes
ENSHGLG00000017574	-	100	66.917	ENSORLG00020006213	-	86	66.917	Oryzias_latipes_hni
ENSHGLG00000017574	-	100	68.421	ENSORLG00020003941	lsm1	100	68.421	Oryzias_latipes_hni
ENSHGLG00000017574	-	100	68.421	ENSORLG00015018350	lsm1	100	68.421	Oryzias_latipes_hsok
ENSHGLG00000017574	-	100	69.173	ENSOMEG00000012454	lsm1	100	69.173	Oryzias_melastigma
ENSHGLG00000017574	-	100	79.699	ENSOGAG00000015161	LSM1	100	79.699	Otolemur_garnettii
ENSHGLG00000017574	-	100	79.699	ENSOARG00000001317	LSM1	100	79.699	Ovis_aries
ENSHGLG00000017574	-	100	79.699	ENSPPAG00000032279	LSM1	100	79.699	Pan_paniscus
ENSHGLG00000017574	-	100	79.699	ENSPPRG00000014172	-	100	79.699	Panthera_pardus
ENSHGLG00000017574	-	100	79.699	ENSPTIG00000010289	LSM1	100	79.699	Panthera_tigris_altaica
ENSHGLG00000017574	-	100	79.699	ENSPTRG00000020169	LSM1	100	79.699	Pan_troglodytes
ENSHGLG00000017574	-	100	79.699	ENSPANG00000008814	LSM1	100	79.699	Papio_anubis
ENSHGLG00000017574	-	100	68.421	ENSPKIG00000019409	LSM1	99	68.421	Paramormyrops_kingsleyae
ENSHGLG00000017574	-	93	79.091	ENSPKIG00000001839	lsm1	100	71.429	Paramormyrops_kingsleyae
ENSHGLG00000017574	-	93	84.545	ENSPSIG00000012563	LSM1	85	84.545	Pelodiscus_sinensis
ENSHGLG00000017574	-	55	68.831	ENSPMGG00000022999	lsm1	73	68.831	Periophthalmus_magnuspinnatus
ENSHGLG00000017574	-	93	70.909	ENSPMAG00000002671	lsm1	97	70.909	Petromyzon_marinus
ENSHGLG00000017574	-	100	76.692	ENSPCIG00000008880	LSM1	100	76.692	Phascolarctos_cinereus
ENSHGLG00000017574	-	100	67.669	ENSPFOG00000016029	lsm1	100	67.669	Poecilia_formosa
ENSHGLG00000017574	-	100	67.669	ENSPLAG00000007879	lsm1	100	67.669	Poecilia_latipinna
ENSHGLG00000017574	-	100	67.669	ENSPMEG00000023550	lsm1	100	67.669	Poecilia_mexicana
ENSHGLG00000017574	-	100	67.669	ENSPREG00000009574	lsm1	100	67.669	Poecilia_reticulata
ENSHGLG00000017574	-	100	79.699	ENSPPYG00000018521	LSM1	100	79.699	Pongo_abelii
ENSHGLG00000017574	-	100	79.699	ENSPCOG00000020901	-	100	79.699	Propithecus_coquereli
ENSHGLG00000017574	-	100	79.699	ENSPVAG00000006016	LSM1	100	79.699	Pteropus_vampyrus
ENSHGLG00000017574	-	100	68.421	ENSPNYG00000018067	lsm1	100	68.421	Pundamilia_nyererei
ENSHGLG00000017574	-	100	66.165	ENSPNAG00000013707	lsm1	100	66.165	Pygocentrus_nattereri
ENSHGLG00000017574	-	100	77.444	ENSRNOG00000015375	Lsm1	100	77.444	Rattus_norvegicus
ENSHGLG00000017574	-	100	79.699	ENSRBIG00000027449	LSM1	100	79.699	Rhinopithecus_bieti
ENSHGLG00000017574	-	100	79.699	ENSRROG00000036074	LSM1	100	79.699	Rhinopithecus_roxellana
ENSHGLG00000017574	-	100	77.444	ENSSHAG00000017260	LSM1	100	77.444	Sarcophilus_harrisii
ENSHGLG00000017574	-	100	72.932	ENSSFOG00015019528	lsm1	100	72.932	Scleropages_formosus
ENSHGLG00000017574	-	100	68.421	ENSSMAG00000004930	lsm1	100	68.421	Scophthalmus_maximus
ENSHGLG00000017574	-	100	69.173	ENSSDUG00000021823	lsm1	100	69.173	Seriola_dumerili
ENSHGLG00000017574	-	100	69.173	ENSSLDG00000012154	lsm1	100	69.173	Seriola_lalandi_dorsalis
ENSHGLG00000017574	-	100	75.940	ENSSPUG00000014878	LSM1	100	75.940	Sphenodon_punctatus
ENSHGLG00000017574	-	100	69.173	ENSSPAG00000020548	lsm1	100	69.173	Stegastes_partitus
ENSHGLG00000017574	-	100	78.195	ENSSSCG00000039058	LSM1	100	78.195	Sus_scrofa
ENSHGLG00000017574	-	100	75.940	ENSTGUG00000004793	LSM1	100	75.940	Taeniopygia_guttata
ENSHGLG00000017574	-	100	67.669	ENSTRUG00000025239	lsm1	100	67.669	Takifugu_rubripes
ENSHGLG00000017574	-	100	67.669	ENSTNIG00000004055	lsm1	100	67.669	Tetraodon_nigroviridis
ENSHGLG00000017574	-	93	86.364	ENSTBEG00000015884	LSM1	94	86.364	Tupaia_belangeri
ENSHGLG00000017574	-	100	79.699	ENSTTRG00000004482	LSM1	100	79.699	Tursiops_truncatus
ENSHGLG00000017574	-	100	79.699	ENSUAMG00000004103	LSM1	100	79.699	Ursus_americanus
ENSHGLG00000017574	-	100	79.699	ENSUMAG00000009132	LSM1	100	79.699	Ursus_maritimus
ENSHGLG00000017574	-	55	76.316	ENSVPAG00000011593	LSM1	100	76.316	Vicugna_pacos
ENSHGLG00000017574	-	100	79.699	ENSVVUG00000020191	LSM1	100	79.699	Vulpes_vulpes
ENSHGLG00000017574	-	63	56.977	ENSVVUG00000014880	-	91	56.977	Vulpes_vulpes
ENSHGLG00000017574	-	100	72.993	ENSXETG00000009004	lsm1	100	72.993	Xenopus_tropicalis
ENSHGLG00000017574	-	100	67.669	ENSXCOG00000015631	lsm1	100	67.669	Xiphophorus_couchianus
ENSHGLG00000017574	-	100	67.669	ENSXMAG00000026637	lsm1	100	67.669	Xiphophorus_maculatus