EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000017580 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 6386 bases
Position: chrJH602100.1:7294499-7300884
Accession: 101724484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000024656	RRM_1	PF00076.22	2.3e-15	1	1
ENSHGLP00000024656	RRM_3	PF08777.11	3.5e-30	1	1
ENSHGLP00000024656	La	PF05383.17	6.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000024878	-	1239	XM_004857644	ENSHGLP00000024656	412 (aa)	XP_004857701	-

Gene Model

Click here to download ENSHGLG00000017580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000017580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000017580	-	100	88.647	ENSHGLG00000004478	-	100	88.647
ENSHGLG00000017580	-	100	88.107	ENSHGLG00000005832	-	100	88.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000017580	-	100	93.494	ENSG00000138385	SSB	100	97.500	Homo_sapiens
ENSHGLG00000017580	-	98	54.791	ENSAPOG00000003448	ssb	100	55.340	Acanthochromis_polyacanthus
ENSHGLG00000017580	-	100	91.667	ENSAMEG00000010507	SSB	100	91.667	Ailuropoda_melanoleuca
ENSHGLG00000017580	-	92	57.480	ENSACIG00000001738	ssb	97	57.480	Amphilophus_citrinellus
ENSHGLG00000017580	-	98	55.283	ENSAOCG00000020398	ssb	100	55.825	Amphiprion_ocellaris
ENSHGLG00000017580	-	98	55.528	ENSAPEG00000020395	ssb	100	56.068	Amphiprion_percula
ENSHGLG00000017580	-	99	58.394	ENSATEG00000016884	ssb	100	58.738	Anabas_testudineus
ENSHGLG00000017580	-	100	72.471	ENSAPLG00000006109	SSB	100	72.471	Anas_platyrhynchos
ENSHGLG00000017580	-	100	66.667	ENSACAG00000017008	SSB	99	66.667	Anolis_carolinensis
ENSHGLG00000017580	-	100	84.223	ENSANAG00000027195	-	100	84.223	Aotus_nancymaae
ENSHGLG00000017580	-	99	54.015	ENSACLG00000010798	ssb	100	53.771	Astatotilapia_calliptera
ENSHGLG00000017580	-	98	54.745	ENSAMXG00000012606	ssb	100	56.490	Astyanax_mexicanus
ENSHGLG00000017580	-	100	93.447	ENSBTAG00000008716	SSB	100	93.447	Bos_taurus
ENSHGLG00000017580	-	72	35.430	WBGene00016653	C44E4.4	76	35.430	Caenorhabditis_elegans
ENSHGLG00000017580	-	100	93.204	ENSCJAG00000045073	SSB	100	93.204	Callithrix_jacchus
ENSHGLG00000017580	-	100	93.462	ENSCAFG00000012418	SSB	100	93.462	Canis_familiaris
ENSHGLG00000017580	-	100	93.462	ENSCAFG00020002900	SSB	100	93.462	Canis_lupus_dingo
ENSHGLG00000017580	-	100	93.447	ENSCHIG00000022624	-	100	93.447	Capra_hircus
ENSHGLG00000017580	-	100	87.379	ENSCHIG00000022196	-	100	87.379	Capra_hircus
ENSHGLG00000017580	-	100	93.932	ENSTSYG00000000097	SSB	100	93.932	Carlito_syrichta
ENSHGLG00000017580	-	100	96.602	ENSCPOG00000003338	SSB	100	96.602	Cavia_porcellus
ENSHGLG00000017580	-	100	93.689	ENSCCAG00000035147	SSB	100	93.689	Cebus_capucinus
ENSHGLG00000017580	-	100	69.660	ENSCATG00000042909	-	100	69.660	Cercocebus_atys
ENSHGLG00000017580	-	100	73.544	ENSCATG00000036701	SSB	100	73.544	Cercocebus_atys
ENSHGLG00000017580	-	100	96.359	ENSCLAG00000015617	-	100	96.359	Chinchilla_lanigera
ENSHGLG00000017580	-	100	93.689	ENSCSAG00000015200	SSB	89	93.689	Chlorocebus_sabaeus
ENSHGLG00000017580	-	98	85.149	ENSCSAG00000018390	-	100	85.149	Chlorocebus_sabaeus
ENSHGLG00000017580	-	100	93.447	ENSCHOG00000007763	SSB	100	93.447	Choloepus_hoffmanni
ENSHGLG00000017580	-	100	76.442	ENSCPBG00000006519	SSB	100	78.606	Chrysemys_picta_bellii
ENSHGLG00000017580	-	100	79.612	ENSCANG00000033240	-	100	79.612	Colobus_angolensis_palliatus
ENSHGLG00000017580	-	100	93.689	ENSCANG00000027695	SSB	100	93.689	Colobus_angolensis_palliatus
ENSHGLG00000017580	-	98	73.399	ENSCANG00000028838	-	95	73.399	Colobus_angolensis_palliatus
ENSHGLG00000017580	-	100	78.641	ENSCGRG00001024831	Ssb	100	79.612	Cricetulus_griseus_chok1gshd
ENSHGLG00000017580	-	100	78.641	ENSCGRG00000005387	Ssb	100	79.612	Cricetulus_griseus_crigri
ENSHGLG00000017580	-	98	57.037	ENSCSEG00000011599	ssb	99	57.389	Cynoglossus_semilaevis
ENSHGLG00000017580	-	99	57.664	ENSCVAG00000021558	ssb	100	58.394	Cyprinodon_variegatus
ENSHGLG00000017580	-	98	56.341	ENSDARG00000029252	ssb	99	56.934	Danio_rerio
ENSHGLG00000017580	-	100	93.689	ENSDNOG00000013450	SSB	100	93.689	Dasypus_novemcinctus
ENSHGLG00000017580	-	100	84.951	ENSDORG00000005543	Ssb	100	84.951	Dipodomys_ordii
ENSHGLG00000017580	-	84	33.708	FBgn0011638	La	86	34.160	Drosophila_melanogaster
ENSHGLG00000017580	-	57	94.527	ENSETEG00000004614	-	61	94.527	Echinops_telfairi
ENSHGLG00000017580	-	96	47.487	ENSEBUG00000001237	ssb	96	47.990	Eptatretus_burgeri
ENSHGLG00000017580	-	100	94.660	ENSEASG00005022835	SSB	100	94.660	Equus_asinus_asinus
ENSHGLG00000017580	-	100	94.903	ENSECAG00000018495	SSB	100	94.903	Equus_caballus
ENSHGLG00000017580	-	81	89.286	ENSEEUG00000008077	SSB	86	89.286	Erinaceus_europaeus
ENSHGLG00000017580	-	98	58.088	ENSELUG00000020929	ssb	100	59.564	Esox_lucius
ENSHGLG00000017580	-	100	93.220	ENSFCAG00000011601	SSB	100	93.220	Felis_catus
ENSHGLG00000017580	-	100	72.115	ENSFALG00000000930	SSB	100	74.519	Ficedula_albicollis
ENSHGLG00000017580	-	100	97.087	ENSFDAG00000000598	SSB	100	97.087	Fukomys_damarensis
ENSHGLG00000017580	-	73	53.770	ENSFHEG00000003268	ssb	95	54.487	Fundulus_heteroclitus
ENSHGLG00000017580	-	97	55.062	ENSGMOG00000002664	ssb	99	54.988	Gadus_morhua
ENSHGLG00000017580	-	100	74.217	ENSGALG00000009677	SSB	100	74.217	Gallus_gallus
ENSHGLG00000017580	-	99	55.718	ENSGAFG00000002749	ssb	100	56.068	Gambusia_affinis
ENSHGLG00000017580	-	99	55.097	ENSGACG00000005107	ssb	100	55.097	Gasterosteus_aculeatus
ENSHGLG00000017580	-	100	76.202	ENSGAGG00000007807	SSB	100	78.365	Gopherus_agassizii
ENSHGLG00000017580	-	100	76.942	ENSGGOG00000024891	-	100	76.942	Gorilla_gorilla
ENSHGLG00000017580	-	63	89.655	ENSGGOG00000023471	-	100	89.655	Gorilla_gorilla
ENSHGLG00000017580	-	99	53.528	ENSHBUG00000006584	ssb	100	53.285	Haplochromis_burtoni
ENSHGLG00000017580	-	100	83.738	ENSHGLG00100008767	-	100	83.738	Heterocephalus_glaber_male
ENSHGLG00000017580	-	100	100.000	ENSHGLG00100003084	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000017580	-	98	54.208	ENSHCOG00000019011	ssb	99	54.703	Hippocampus_comes
ENSHGLG00000017580	-	97	57.457	ENSIPUG00000003681	SSB	99	58.010	Ictalurus_punctatus
ENSHGLG00000017580	-	100	94.660	ENSSTOG00000008416	SSB	100	94.660	Ictidomys_tridecemlineatus
ENSHGLG00000017580	-	99	67.237	ENSJJAG00000016250	-	99	67.237	Jaculus_jaculus
ENSHGLG00000017580	-	100	80.615	ENSJJAG00000023158	-	100	80.615	Jaculus_jaculus
ENSHGLG00000017580	-	99	55.718	ENSKMAG00000017317	ssb	100	56.068	Kryptolebias_marmoratus
ENSHGLG00000017580	-	98	54.054	ENSLBEG00000017345	ssb	100	54.612	Labrus_bergylta
ENSHGLG00000017580	-	99	68.116	ENSLACG00000014056	SSB	99	68.599	Latimeria_chalumnae
ENSHGLG00000017580	-	98	66.585	ENSLOCG00000007933	ssb	99	66.830	Lepisosteus_oculatus
ENSHGLG00000017580	-	100	88.626	ENSLAFG00000000867	-	100	89.810	Loxodonta_africana
ENSHGLG00000017580	-	100	78.641	ENSLAFG00000028909	-	100	78.641	Loxodonta_africana
ENSHGLG00000017580	-	73	70.199	ENSLAFG00000026721	-	99	70.199	Loxodonta_africana
ENSHGLG00000017580	-	100	93.932	ENSMFAG00000039066	SSB	100	93.932	Macaca_fascicularis
ENSHGLG00000017580	-	88	79.670	ENSMFAG00000041478	-	100	79.670	Macaca_fascicularis
ENSHGLG00000017580	-	99	65.610	ENSMMUG00000039889	-	100	65.854	Macaca_mulatta
ENSHGLG00000017580	-	100	79.126	ENSMMUG00000011724	-	97	79.126	Macaca_mulatta
ENSHGLG00000017580	-	100	93.932	ENSMMUG00000023051	SSB	100	93.932	Macaca_mulatta
ENSHGLG00000017580	-	100	81.535	ENSMNEG00000028321	SSB	85	98.261	Macaca_nemestrina
ENSHGLG00000017580	-	88	79.670	ENSMNEG00000034698	-	100	79.670	Macaca_nemestrina
ENSHGLG00000017580	-	100	93.932	ENSMLEG00000035717	SSB	100	93.932	Mandrillus_leucophaeus
ENSHGLG00000017580	-	100	66.748	ENSMLEG00000042644	-	100	66.748	Mandrillus_leucophaeus
ENSHGLG00000017580	-	99	59.367	ENSMAMG00000004800	ssb	100	59.709	Mastacembelus_armatus
ENSHGLG00000017580	-	99	54.015	ENSMZEG00005005749	ssb	100	53.771	Maylandia_zebra
ENSHGLG00000017580	-	100	73.976	ENSMGAG00000010328	SSB	99	76.585	Meleagris_gallopavo
ENSHGLG00000017580	-	98	86.386	ENSMICG00000033304	-	98	85.570	Microcebus_murinus
ENSHGLG00000017580	-	99	95.122	ENSMICG00000028252	-	99	95.122	Microcebus_murinus
ENSHGLG00000017580	-	100	79.759	ENSMODG00000008227	-	100	79.759	Monodelphis_domestica
ENSHGLG00000017580	-	85	79.874	ENSMODG00000007027	-	99	79.874	Monodelphis_domestica
ENSHGLG00000017580	-	100	56.010	ENSMODG00000019271	-	100	57.452	Monodelphis_domestica
ENSHGLG00000017580	-	90	55.376	ENSMALG00000008045	ssb	90	58.486	Monopterus_albus
ENSHGLG00000017580	-	100	77.672	MGP_CAROLIEiJ_G0023629	-	100	91.304	Mus_caroli
ENSHGLG00000017580	-	100	76.960	ENSMUSG00000068882	Ssb	100	91.304	Mus_musculus
ENSHGLG00000017580	-	100	77.435	MGP_PahariEiJ_G0025081	-	100	92.391	Mus_pahari
ENSHGLG00000017580	-	100	76.960	MGP_SPRETEiJ_G0024551	Ssb	100	91.304	Mus_spretus
ENSHGLG00000017580	-	100	93.689	ENSMPUG00000000785	SSB	100	93.689	Mustela_putorius_furo
ENSHGLG00000017580	-	100	90.714	ENSMLUG00000016316	SSB	100	90.714	Myotis_lucifugus
ENSHGLG00000017580	-	99	54.015	ENSNBRG00000012661	ssb	100	53.771	Neolamprologus_brichardi
ENSHGLG00000017580	-	100	94.175	ENSNLEG00000004958	SSB	100	94.175	Nomascus_leucogenys
ENSHGLG00000017580	-	100	67.070	ENSNLEG00000028754	-	100	67.554	Nomascus_leucogenys
ENSHGLG00000017580	-	60	89.113	ENSMEUG00000001650	-	100	89.113	Notamacropus_eugenii
ENSHGLG00000017580	-	72	74.074	ENSOPRG00000008475	-	100	74.074	Ochotona_princeps
ENSHGLG00000017580	-	93	89.091	ENSODEG00000004202	-	100	89.091	Octodon_degus
ENSHGLG00000017580	-	99	53.771	ENSONIG00000008776	ssb	100	53.528	Oreochromis_niloticus
ENSHGLG00000017580	-	100	81.553	ENSOANG00000008543	SSB	100	83.252	Ornithorhynchus_anatinus
ENSHGLG00000017580	-	100	94.175	ENSOCUG00000010396	SSB	100	94.175	Oryctolagus_cuniculus
ENSHGLG00000017580	-	99	56.934	ENSORLG00000017208	ssb	100	57.282	Oryzias_latipes
ENSHGLG00000017580	-	99	57.178	ENSORLG00020022574	ssb	100	57.524	Oryzias_latipes_hni
ENSHGLG00000017580	-	99	56.934	ENSORLG00015016592	ssb	100	57.282	Oryzias_latipes_hsok
ENSHGLG00000017580	-	98	56.511	ENSOMEG00000003193	ssb	100	57.178	Oryzias_melastigma
ENSHGLG00000017580	-	100	90.758	ENSOGAG00000029768	SSB	100	90.758	Otolemur_garnettii
ENSHGLG00000017580	-	100	92.961	ENSOARG00000002906	SSB	100	92.961	Ovis_aries
ENSHGLG00000017580	-	100	75.971	ENSPPAG00000032427	-	100	86.047	Pan_paniscus
ENSHGLG00000017580	-	97	72.569	ENSPPAG00000006189	-	96	76.253	Pan_paniscus
ENSHGLG00000017580	-	100	93.494	ENSPPAG00000042673	SSB	100	93.494	Pan_paniscus
ENSHGLG00000017580	-	100	93.220	ENSPPRG00000006599	SSB	100	93.220	Panthera_pardus
ENSHGLG00000017580	-	100	92.978	ENSPTIG00000011021	SSB	97	92.978	Panthera_tigris_altaica
ENSHGLG00000017580	-	100	72.330	ENSPTRG00000042880	-	100	72.330	Pan_troglodytes
ENSHGLG00000017580	-	100	93.494	ENSPTRG00000012620	SSB	100	93.494	Pan_troglodytes
ENSHGLG00000017580	-	98	64.778	ENSPANG00000031877	-	95	64.778	Papio_anubis
ENSHGLG00000017580	-	100	93.932	ENSPANG00000007440	SSB	100	93.932	Papio_anubis
ENSHGLG00000017580	-	100	67.233	ENSPANG00000034126	-	100	67.718	Papio_anubis
ENSHGLG00000017580	-	98	61.576	ENSPKIG00000019325	ssb	99	62.774	Paramormyrops_kingsleyae
ENSHGLG00000017580	-	100	73.558	ENSPSIG00000002265	SSB	93	75.481	Pelodiscus_sinensis
ENSHGLG00000017580	-	84	53.846	ENSPMGG00000020075	ssb	91	55.650	Periophthalmus_magnuspinnatus
ENSHGLG00000017580	-	80	50.606	ENSPMAG00000002982	ssb	100	46.207	Petromyzon_marinus
ENSHGLG00000017580	-	100	82.039	ENSPCIG00000028591	-	100	82.809	Phascolarctos_cinereus
ENSHGLG00000017580	-	99	56.691	ENSPFOG00000009650	ssb	100	57.039	Poecilia_formosa
ENSHGLG00000017580	-	99	56.448	ENSPLAG00000020498	ssb	100	56.796	Poecilia_latipinna
ENSHGLG00000017580	-	99	56.448	ENSPMEG00000001051	ssb	100	56.796	Poecilia_mexicana
ENSHGLG00000017580	-	94	56.812	ENSPREG00000003708	ssb	99	57.179	Poecilia_reticulata
ENSHGLG00000017580	-	100	94.175	ENSPPYG00000012919	SSB	100	94.175	Pongo_abelii
ENSHGLG00000017580	-	95	87.436	ENSPCAG00000010276	SSB	100	89.231	Procavia_capensis
ENSHGLG00000017580	-	100	83.738	ENSPCOG00000023189	-	100	83.738	Propithecus_coquereli
ENSHGLG00000017580	-	100	91.262	ENSPCOG00000015741	-	100	91.262	Propithecus_coquereli
ENSHGLG00000017580	-	88	93.906	ENSPVAG00000006615	SSB	100	93.906	Pteropus_vampyrus
ENSHGLG00000017580	-	99	54.015	ENSPNYG00000006444	ssb	100	53.771	Pundamilia_nyererei
ENSHGLG00000017580	-	98	55.932	ENSPNAG00000011708	ssb	100	57.416	Pygocentrus_nattereri
ENSHGLG00000017580	-	100	77.427	ENSRNOG00000011606	AABR07061825.1	100	77.427	Rattus_norvegicus
ENSHGLG00000017580	-	100	77.672	ENSRNOG00000007998	Ssb	100	77.672	Rattus_norvegicus
ENSHGLG00000017580	-	100	77.698	ENSRBIG00000041972	SSB	88	98.261	Rhinopithecus_bieti
ENSHGLG00000017580	-	89	85.366	ENSRBIG00000041608	-	98	85.366	Rhinopithecus_bieti
ENSHGLG00000017580	-	94	77.979	ENSRBIG00000041232	-	98	77.979	Rhinopithecus_bieti
ENSHGLG00000017580	-	100	68.039	ENSRBIG00000029918	-	100	68.039	Rhinopithecus_bieti
ENSHGLG00000017580	-	98	78.908	ENSRROG00000031684	-	100	78.908	Rhinopithecus_roxellana
ENSHGLG00000017580	-	98	84.275	ENSRROG00000034102	-	98	84.198	Rhinopithecus_roxellana
ENSHGLG00000017580	-	100	93.689	ENSRROG00000040346	SSB	100	93.689	Rhinopithecus_roxellana
ENSHGLG00000017580	-	100	77.724	ENSRROG00000007149	-	100	77.724	Rhinopithecus_roxellana
ENSHGLG00000017580	-	100	94.175	ENSSBOG00000027204	SSB	100	94.175	Saimiri_boliviensis_boliviensis
ENSHGLG00000017580	-	100	81.553	ENSSHAG00000018062	SSB	100	82.324	Sarcophilus_harrisii
ENSHGLG00000017580	-	99	63.614	ENSSFOG00015000550	ssb	100	64.337	Scleropages_formosus
ENSHGLG00000017580	-	98	53.448	ENSSMAG00000013885	ssb	99	57.407	Scophthalmus_maximus
ENSHGLG00000017580	-	99	57.421	ENSSDUG00000020117	ssb	100	57.767	Seriola_dumerili
ENSHGLG00000017580	-	99	54.390	ENSSLDG00000002525	ssb	100	55.231	Seriola_lalandi_dorsalis
ENSHGLG00000017580	-	95	85.128	ENSSARG00000007747	SSB	100	85.128	Sorex_araneus
ENSHGLG00000017580	-	100	72.947	ENSSPUG00000012112	SSB	100	76.087	Sphenodon_punctatus
ENSHGLG00000017580	-	99	55.718	ENSSPAG00000005696	ssb	100	56.068	Stegastes_partitus
ENSHGLG00000017580	-	98	76.296	ENSSSCG00000015938	SSB	98	77.284	Sus_scrofa
ENSHGLG00000017580	-	100	71.875	ENSTGUG00000007942	SSB	100	74.279	Taeniopygia_guttata
ENSHGLG00000017580	-	99	56.311	ENSTRUG00000017839	ssb	100	57.039	Takifugu_rubripes
ENSHGLG00000017580	-	91	58.400	ENSTNIG00000000915	ssb	100	58.400	Tetraodon_nigroviridis
ENSHGLG00000017580	-	83	98.261	ENSTBEG00000009056	SSB	82	98.261	Tupaia_belangeri
ENSHGLG00000017580	-	100	93.220	ENSTTRG00000002152	SSB	100	93.220	Tursiops_truncatus
ENSHGLG00000017580	-	93	94.531	ENSUAMG00000027833	SSB	99	94.531	Ursus_americanus
ENSHGLG00000017580	-	100	93.947	ENSUMAG00000013907	SSB	100	93.947	Ursus_maritimus
ENSHGLG00000017580	-	100	93.204	ENSVPAG00000007183	SSB	100	93.204	Vicugna_pacos
ENSHGLG00000017580	-	100	93.462	ENSVVUG00000016573	SSB	78	93.462	Vulpes_vulpes
ENSHGLG00000017580	-	100	57.931	ENSXETG00000025402	ssb	100	59.770	Xenopus_tropicalis
ENSHGLG00000017580	-	94	54.381	ENSXCOG00000019109	ssb	99	55.013	Xiphophorus_couchianus
ENSHGLG00000017580	-	99	55.718	ENSXMAG00000004888	ssb	100	56.311	Xiphophorus_maculatus