EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000017607 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 1245 bases
Position: chrJH602096.1:3657797-3659041
Accession: 101716669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000024689	zf-RNPHF	PF08080.12	1.3e-21	1	1
ENSHGLP00000024689	RRM_1	PF00076.22	2.6e-26	1	2
ENSHGLP00000024689	RRM_1	PF00076.22	2.6e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000024911	-	1227	XM_013076484	ENSHGLP00000024689	408 (aa)	XP_012931938	-

Gene Model

Click here to download ENSHGLG00000017607's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000017607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000017607	-	99	69.479	ENSHGLG00000018565	-	96	68.269
ENSHGLG00000017607	-	93	88.095	ENSHGLG00000014139	-	97	88.095
ENSHGLG00000017607	-	51	62.810	ENSHGLG00000011321	-	82	55.172
ENSHGLG00000017607	-	89	36.883	ENSHGLG00000000661	GRSF1	93	36.883
ENSHGLG00000017607	-	100	89.130	ENSHGLG00000000147	-	99	89.130
ENSHGLG00000017607	-	94	52.344	ENSHGLG00000016084	-	94	50.488
ENSHGLG00000017607	-	70	34.211	ENSHGLG00000013208	RBM12	50	34.211
ENSHGLG00000017607	-	97	45.631	ENSHGLG00000008716	-	90	47.573
ENSHGLG00000017607	-	99	67.494	ENSHGLG00000001154	HNRNPH2	95	65.116
ENSHGLG00000017607	-	99	86.861	ENSHGLG00000010276	-	99	86.861

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000017607	-	100	87.440	ENSG00000169813	HNRNPF	99	91.753	Homo_sapiens
ENSHGLG00000017607	-	100	87.198	ENSAMEG00000018983	HNRNPF	99	87.198	Ailuropoda_melanoleuca
ENSHGLG00000017607	-	90	75.339	ENSANAG00000033452	-	89	75.339	Aotus_nancymaae
ENSHGLG00000017607	-	100	85.266	ENSANAG00000033285	-	99	85.266	Aotus_nancymaae
ENSHGLG00000017607	-	100	86.957	ENSBTAG00000008853	HNRNPF	99	86.957	Bos_taurus
ENSHGLG00000017607	-	99	72.182	ENSBTAG00000020513	-	99	72.182	Bos_taurus
ENSHGLG00000017607	-	100	87.681	ENSCJAG00000008291	HNRNPF	99	87.681	Callithrix_jacchus
ENSHGLG00000017607	-	100	87.198	ENSCAFG00000007044	HNRNPF	99	87.198	Canis_familiaris
ENSHGLG00000017607	-	100	86.957	ENSCHIG00000006714	HNRNPF	99	86.957	Capra_hircus
ENSHGLG00000017607	-	97	64.951	ENSCHIG00000022971	-	98	64.951	Capra_hircus
ENSHGLG00000017607	-	100	87.198	ENSTSYG00000030439	-	99	87.198	Carlito_syrichta
ENSHGLG00000017607	-	99	74.396	ENSTSYG00000002112	-	99	74.396	Carlito_syrichta
ENSHGLG00000017607	-	100	88.889	ENSCAPG00000011521	HNRNPF	99	88.889	Cavia_aperea
ENSHGLG00000017607	-	100	88.889	ENSCPOG00000003678	HNRNPF	99	88.889	Cavia_porcellus
ENSHGLG00000017607	-	100	87.440	ENSCCAG00000031457	-	99	87.440	Cebus_capucinus
ENSHGLG00000017607	-	100	71.149	ENSCCAG00000028687	-	99	71.149	Cebus_capucinus
ENSHGLG00000017607	-	100	88.889	ENSCLAG00000005161	HNRNPF	99	88.889	Chinchilla_lanigera
ENSHGLG00000017607	-	100	85.990	ENSCANG00000003086	-	99	85.990	Colobus_angolensis_palliatus
ENSHGLG00000017607	-	96	68.031	ENSCGRG00001016206	-	88	68.031	Cricetulus_griseus_chok1gshd
ENSHGLG00000017607	-	100	88.406	ENSCGRG00001016276	Hnrnpf	99	88.406	Cricetulus_griseus_chok1gshd
ENSHGLG00000017607	-	96	86.189	ENSDNOG00000030849	-	99	83.816	Dasypus_novemcinctus
ENSHGLG00000017607	-	100	87.198	ENSDORG00000024298	-	99	87.198	Dipodomys_ordii
ENSHGLG00000017607	-	100	80.676	ENSDORG00000008260	-	99	80.676	Dipodomys_ordii
ENSHGLG00000017607	-	100	84.058	ENSDORG00000024936	-	99	84.058	Dipodomys_ordii
ENSHGLG00000017607	-	100	79.952	ENSDORG00000005431	-	99	79.952	Dipodomys_ordii
ENSHGLG00000017607	-	100	87.198	ENSEASG00005006903	HNRNPF	99	87.198	Equus_asinus_asinus
ENSHGLG00000017607	-	96	89.258	ENSECAG00000003229	HNRNPF	97	89.258	Equus_caballus
ENSHGLG00000017607	-	100	87.198	ENSFCAG00000028219	-	99	87.198	Felis_catus
ENSHGLG00000017607	-	100	72.222	ENSFDAG00000015308	-	98	72.222	Fukomys_damarensis
ENSHGLG00000017607	-	100	88.889	ENSFDAG00000011431	-	99	88.889	Fukomys_damarensis
ENSHGLG00000017607	-	89	89.548	ENSFDAG00000007858	-	87	89.548	Fukomys_damarensis
ENSHGLG00000017607	-	92	89.362	ENSGGOG00000010867	HNRNPF	93	89.362	Gorilla_gorilla
ENSHGLG00000017607	-	96	100.000	ENSHGLG00100019910	-	99	100.000	Heterocephalus_glaber_male
ENSHGLG00000017607	-	99	87.591	ENSHGLG00100019572	-	99	87.591	Heterocephalus_glaber_male
ENSHGLG00000017607	-	98	88.916	ENSHGLG00100020825	-	100	88.916	Heterocephalus_glaber_male
ENSHGLG00000017607	-	99	86.861	ENSHGLG00100019558	-	99	86.861	Heterocephalus_glaber_male
ENSHGLG00000017607	-	93	80.688	ENSHGLG00100010905	-	97	80.688	Heterocephalus_glaber_male
ENSHGLG00000017607	-	100	88.406	ENSSTOG00000025560	-	99	88.406	Ictidomys_tridecemlineatus
ENSHGLG00000017607	-	99	75.181	ENSSTOG00000023820	-	99	75.181	Ictidomys_tridecemlineatus
ENSHGLG00000017607	-	100	79.277	ENSSTOG00000022853	-	99	79.277	Ictidomys_tridecemlineatus
ENSHGLG00000017607	-	99	66.184	ENSJJAG00000000554	-	99	66.184	Jaculus_jaculus
ENSHGLG00000017607	-	99	59.564	ENSJJAG00000014424	-	99	59.564	Jaculus_jaculus
ENSHGLG00000017607	-	100	79.952	ENSJJAG00000017385	-	99	79.952	Jaculus_jaculus
ENSHGLG00000017607	-	100	72.947	ENSJJAG00000022288	-	99	72.947	Jaculus_jaculus
ENSHGLG00000017607	-	98	84.636	ENSJJAG00000014334	-	98	84.636	Jaculus_jaculus
ENSHGLG00000017607	-	100	86.024	ENSLAFG00000000424	HNRNPF	99	86.024	Loxodonta_africana
ENSHGLG00000017607	-	100	87.440	ENSMFAG00000021184	HNRNPF	99	87.440	Macaca_fascicularis
ENSHGLG00000017607	-	100	87.440	ENSMMUG00000020982	HNRNPF	99	87.440	Macaca_mulatta
ENSHGLG00000017607	-	100	87.440	ENSMLEG00000023515	HNRNPF	99	87.440	Mandrillus_leucophaeus
ENSHGLG00000017607	-	100	88.406	ENSMAUG00000007892	Hnrnpf	99	88.406	Mesocricetus_auratus
ENSHGLG00000017607	-	99	71.671	ENSMICG00000043739	-	99	71.671	Microcebus_murinus
ENSHGLG00000017607	-	99	71.905	ENSMICG00000044171	-	99	71.905	Microcebus_murinus
ENSHGLG00000017607	-	100	87.681	ENSMOCG00000014915	Hnrnpf	99	87.681	Microtus_ochrogaster
ENSHGLG00000017607	-	100	88.406	ENSMUSG00000042079	Hnrnpf	99	90.870	Mus_musculus
ENSHGLG00000017607	-	100	87.198	MGP_PahariEiJ_G0026903	-	99	87.198	Mus_pahari
ENSHGLG00000017607	-	100	87.010	ENSMPUG00000017283	HNRNPF	99	87.010	Mustela_putorius_furo
ENSHGLG00000017607	-	99	85.922	ENSMLUG00000007261	HNRNPF	99	85.922	Myotis_lucifugus
ENSHGLG00000017607	-	99	72.639	ENSNGAG00000014079	-	99	72.639	Nannospalax_galili
ENSHGLG00000017607	-	100	87.923	ENSNGAG00000010409	-	99	87.923	Nannospalax_galili
ENSHGLG00000017607	-	99	63.680	ENSNGAG00000009482	-	99	63.680	Nannospalax_galili
ENSHGLG00000017607	-	100	87.681	ENSNLEG00000019098	HNRNPF	99	87.681	Nomascus_leucogenys
ENSHGLG00000017607	-	100	88.889	ENSODEG00000019266	-	99	88.889	Octodon_degus
ENSHGLG00000017607	-	99	82.968	ENSODEG00000002359	-	99	82.968	Octodon_degus
ENSHGLG00000017607	-	100	83.092	ENSOCUG00000024604	-	99	83.092	Oryctolagus_cuniculus
ENSHGLG00000017607	-	100	87.923	ENSOCUG00000024719	-	99	87.923	Oryctolagus_cuniculus
ENSHGLG00000017607	-	100	81.205	ENSOGAG00000013734	-	99	81.205	Otolemur_garnettii
ENSHGLG00000017607	-	100	83.092	ENSOGAG00000030480	-	99	83.092	Otolemur_garnettii
ENSHGLG00000017607	-	99	71.671	ENSOARG00000016658	-	99	71.671	Ovis_aries
ENSHGLG00000017607	-	90	90.217	ENSOARG00000003995	HNRNPF	91	90.217	Ovis_aries
ENSHGLG00000017607	-	100	87.198	ENSPPRG00000021222	HNRNPF	99	87.198	Panthera_pardus
ENSHGLG00000017607	-	100	87.198	ENSPTIG00000009644	HNRNPF	99	87.198	Panthera_tigris_altaica
ENSHGLG00000017607	-	100	87.440	ENSPTRG00000002446	HNRNPF	99	87.440	Pan_troglodytes
ENSHGLG00000017607	-	100	87.198	ENSPANG00000002212	HNRNPF	99	87.198	Papio_anubis
ENSHGLG00000017607	-	100	87.440	ENSPPYG00000002212	HNRNPF	99	87.440	Pongo_abelii
ENSHGLG00000017607	-	100	85.783	ENSPCAG00000013169	HNRNPF	99	85.783	Procavia_capensis
ENSHGLG00000017607	-	99	87.105	ENSPVAG00000011646	HNRNPF	99	87.105	Pteropus_vampyrus
ENSHGLG00000017607	-	100	88.406	ENSRNOG00000014562	Hnrnpf	99	88.406	Rattus_norvegicus
ENSHGLG00000017607	-	100	87.440	ENSRROG00000001235	HNRNPF	99	87.440	Rhinopithecus_roxellana
ENSHGLG00000017607	-	100	87.681	ENSSBOG00000018361	HNRNPF	99	87.681	Saimiri_boliviensis_boliviensis
ENSHGLG00000017607	-	100	86.957	ENSSARG00000010059	HNRNPF	99	86.957	Sorex_araneus
ENSHGLG00000017607	-	100	68.000	ENSSSCG00000024956	-	95	68.000	Sus_scrofa
ENSHGLG00000017607	-	100	86.957	ENSSSCG00000010203	-	98	90.160	Sus_scrofa
ENSHGLG00000017607	-	98	64.039	ENSTBEG00000016094	HNRNPF	99	64.039	Tupaia_belangeri
ENSHGLG00000017607	-	100	87.198	ENSUAMG00000000455	HNRNPF	99	87.198	Ursus_americanus
ENSHGLG00000017607	-	100	87.198	ENSUMAG00000016485	HNRNPF	99	87.198	Ursus_maritimus
ENSHGLG00000017607	-	100	87.198	ENSVVUG00000021261	HNRNPF	99	87.198	Vulpes_vulpes