EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000018184 (Gene tree)
Gene ID: -
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 45730 bases
Position: chrJH602131.1:5203304-5249033
Accession: 101708745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000025535	ResIII	PF04851.15	1.7e-08	1	1
ENSHGLP00000025532	ResIII	PF04851.15	1.9e-08	1	1
ENSHGLP00000025534	ResIII	PF04851.15	2e-08	1	1
ENSHGLP00000025533	ResIII	PF04851.15	2.1e-08	1	1
ENSHGLP00000025530	ResIII	PF04851.15	2.4e-08	1	1
ENSHGLP00000025529	ResIII	PF04851.15	4.6e-07	1	1
ENSHGLP00000025528	ResIII	PF04851.15	4.9e-07	1	1
ENSHGLP00000025531	ResIII	PF04851.15	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000025761	CHD5-208	5827	-	ENSHGLP00000025535	1892 (aa)	-	-
ENSHGLT00000025760	CHD5-207	5955	-	ENSHGLP00000025534	1909 (aa)	-	-
ENSHGLT00000025758	CHD5-205	5751	-	ENSHGLP00000025532	1916 (aa)	-	-
ENSHGLT00000025759	CHD5-206	5975	XM_004863734	ENSHGLP00000025533	1931 (aa)	XP_004863791	-
ENSHGLT00000025756	CHD5-203	5942	XM_004863732	ENSHGLP00000025530	1953 (aa)	XP_004863789	UPI00034FE026
ENSHGLT00000025757	CHD5-204	6018	-	ENSHGLP00000025531	2005 (aa)	-	-
ENSHGLT00000025754	CHD5-201	5988	-	ENSHGLP00000025528	1995 (aa)	-	-
ENSHGLT00000025755	CHD5-202	5838	-	ENSHGLP00000025529	1946 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000018184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000018184's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000018184	CHD5	99	69.024	ENSHGLG00000012017	CHD3	95	68.094
ENSHGLG00000018184	CHD5	96	71.176	ENSHGLG00000003093	-	95	72.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000018184	CHD5	100	95.496	ENSG00000116254	CHD5	100	95.496	Homo_sapiens
ENSHGLG00000018184	CHD5	99	94.748	ENSAMEG00000009880	CHD5	99	94.332	Ailuropoda_melanoleuca
ENSHGLG00000018184	CHD5	97	77.802	ENSACIG00000012582	chd5	98	80.944	Amphilophus_citrinellus
ENSHGLG00000018184	CHD5	97	78.571	ENSAOCG00000020356	chd5	90	79.650	Amphiprion_ocellaris
ENSHGLG00000018184	CHD5	97	80.391	ENSAPLG00000015475	CHD5	98	81.852	Anas_platyrhynchos
ENSHGLG00000018184	CHD5	99	84.367	ENSACAG00000002441	CHD5	96	84.119	Anolis_carolinensis
ENSHGLG00000018184	CHD5	89	95.506	ENSANAG00000001078	CHD5	91	95.506	Aotus_nancymaae
ENSHGLG00000018184	CHD5	97	74.352	ENSACLG00000003012	chd5	96	75.590	Astatotilapia_calliptera
ENSHGLG00000018184	CHD5	89	80.057	ENSAMXG00000008921	chd5	97	81.838	Astyanax_mexicanus
ENSHGLG00000018184	CHD5	96	95.985	ENSBTAG00000040477	CHD5	100	95.985	Bos_taurus
ENSHGLG00000018184	CHD5	100	95.292	ENSCJAG00000000101	CHD5	100	95.292	Callithrix_jacchus
ENSHGLG00000018184	CHD5	96	95.982	ENSCAFG00000019545	CHD5	100	95.982	Canis_familiaris
ENSHGLG00000018184	CHD5	99	95.648	ENSCAFG00020008689	CHD5	97	95.352	Canis_lupus_dingo
ENSHGLG00000018184	CHD5	99	94.436	ENSCHIG00000015027	CHD5	100	92.782	Capra_hircus
ENSHGLG00000018184	CHD5	99	90.674	ENSTSYG00000033991	CHD5	99	90.432	Carlito_syrichta
ENSHGLG00000018184	CHD5	100	96.806	ENSCAPG00000009294	CHD5	100	96.984	Cavia_aperea
ENSHGLG00000018184	CHD5	100	96.702	ENSCPOG00000025080	CHD5	100	96.931	Cavia_porcellus
ENSHGLG00000018184	CHD5	100	95.394	ENSCCAG00000024756	CHD5	100	95.394	Cebus_capucinus
ENSHGLG00000018184	CHD5	100	94.780	ENSCATG00000043011	CHD5	100	94.780	Cercocebus_atys
ENSHGLG00000018184	CHD5	100	97.225	ENSCLAG00000010589	CHD5	100	97.302	Chinchilla_lanigera
ENSHGLG00000018184	CHD5	100	95.650	ENSCSAG00000000733	CHD5	100	95.650	Chlorocebus_sabaeus
ENSHGLG00000018184	CHD5	96	90.126	ENSCPBG00000019363	CHD5	100	90.016	Chrysemys_picta_bellii
ENSHGLG00000018184	CHD5	99	95.864	ENSCANG00000032302	CHD5	99	95.634	Colobus_angolensis_palliatus
ENSHGLG00000018184	CHD5	56	96.604	ENSCGRG00001011042	Chd5	100	96.604	Cricetulus_griseus_chok1gshd
ENSHGLG00000018184	CHD5	99	95.061	ENSCGRG00000011341	Chd5	99	94.171	Cricetulus_griseus_crigri
ENSHGLG00000018184	CHD5	99	77.035	ENSDARG00000105083	chd5	97	80.612	Danio_rerio
ENSHGLG00000018184	CHD5	97	66.857	ENSDARG00000025789	chd4b	96	67.759	Danio_rerio
ENSHGLG00000018184	CHD5	100	90.839	ENSDNOG00000046342	CHD5	100	90.737	Dasypus_novemcinctus
ENSHGLG00000018184	CHD5	99	95.488	ENSDORG00000005923	Chd5	99	95.233	Dipodomys_ordii
ENSHGLG00000018184	CHD5	99	93.737	ENSEASG00005021464	CHD5	99	97.095	Equus_asinus_asinus
ENSHGLG00000018184	CHD5	99	93.312	ENSECAG00000025043	CHD5	98	96.016	Equus_caballus
ENSHGLG00000018184	CHD5	77	98.605	ENSEEUG00000002772	CHD5	77	98.605	Erinaceus_europaeus
ENSHGLG00000018184	CHD5	97	75.845	ENSELUG00000010742	chd5	92	82.213	Esox_lucius
ENSHGLG00000018184	CHD5	100	94.921	ENSFCAG00000006319	CHD5	100	94.729	Felis_catus
ENSHGLG00000018184	CHD5	99	88.642	ENSFALG00000009740	CHD5	99	87.578	Ficedula_albicollis
ENSHGLG00000018184	CHD5	99	97.293	ENSFDAG00000012881	CHD5	97	96.588	Fukomys_damarensis
ENSHGLG00000018184	CHD5	99	88.577	ENSGALG00000000747	CHD5	100	86.888	Gallus_gallus
ENSHGLG00000018184	CHD5	57	82.708	ENSGACG00000004389	chd5	93	82.996	Gasterosteus_aculeatus
ENSHGLG00000018184	CHD5	99	87.567	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSHGLG00000018184	CHD5	99	95.864	ENSGGOG00000000708	CHD5	99	95.582	Gorilla_gorilla
ENSHGLG00000018184	CHD5	97	75.881	ENSHBUG00000013453	chd5	96	76.936	Haplochromis_burtoni
ENSHGLG00000018184	CHD5	100	93.417	ENSHGLG00100013261	CHD5	99	93.310	Heterocephalus_glaber_male
ENSHGLG00000018184	CHD5	97	77.591	ENSIPUG00000005446	chd5	98	78.706	Ictalurus_punctatus
ENSHGLG00000018184	CHD5	99	96.017	ENSSTOG00000002778	CHD5	99	95.972	Ictidomys_tridecemlineatus
ENSHGLG00000018184	CHD5	100	95.357	ENSJJAG00000019072	Chd5	100	94.679	Jaculus_jaculus
ENSHGLG00000018184	CHD5	99	81.247	ENSLOCG00000004944	chd5	95	81.615	Lepisosteus_oculatus
ENSHGLG00000018184	CHD5	99	95.800	ENSLAFG00000006348	CHD5	99	95.630	Loxodonta_africana
ENSHGLG00000018184	CHD5	99	95.917	ENSMFAG00000033993	CHD5	100	96.092	Macaca_fascicularis
ENSHGLG00000018184	CHD5	99	95.864	ENSMMUG00000016838	CHD5	99	95.634	Macaca_mulatta
ENSHGLG00000018184	CHD5	100	95.752	ENSMNEG00000040044	CHD5	100	95.752	Macaca_nemestrina
ENSHGLG00000018184	CHD5	99	92.513	ENSMLEG00000039166	CHD5	99	92.308	Mandrillus_leucophaeus
ENSHGLG00000018184	CHD5	92	79.661	ENSMZEG00005000841	chd5	92	81.332	Maylandia_zebra
ENSHGLG00000018184	CHD5	99	88.630	ENSMGAG00000001055	CHD5	99	87.046	Meleagris_gallopavo
ENSHGLG00000018184	CHD5	100	91.658	ENSMICG00000017862	CHD5	100	91.658	Microcebus_murinus
ENSHGLG00000018184	CHD5	100	94.731	ENSMOCG00000011049	Chd5	100	94.063	Microtus_ochrogaster
ENSHGLG00000018184	CHD5	100	80.312	ENSMODG00000006294	CHD5	78	93.908	Monodelphis_domestica
ENSHGLG00000018184	CHD5	97	77.521	ENSMALG00000002831	chd5	96	77.583	Monopterus_albus
ENSHGLG00000018184	CHD5	100	94.626	MGP_CAROLIEiJ_G0026857	Chd5	100	94.626	Mus_caroli
ENSHGLG00000018184	CHD5	100	94.427	ENSMUSG00000005045	Chd5	100	94.323	Mus_musculus
ENSHGLG00000018184	CHD5	100	94.679	MGP_PahariEiJ_G0029205	Chd5	100	94.679	Mus_pahari
ENSHGLG00000018184	CHD5	100	94.679	MGP_SPRETEiJ_G0027850	Chd5	100	94.679	Mus_spretus
ENSHGLG00000018184	CHD5	97	95.232	ENSMPUG00000007122	CHD5	99	91.179	Mustela_putorius_furo
ENSHGLG00000018184	CHD5	99	94.374	ENSNGAG00000019812	Chd5	97	93.213	Nannospalax_galili
ENSHGLG00000018184	CHD5	99	93.372	ENSNLEG00000010320	CHD5	99	92.931	Nomascus_leucogenys
ENSHGLG00000018184	CHD5	87	90.541	ENSOPRG00000004304	CHD5	85	90.455	Ochotona_princeps
ENSHGLG00000018184	CHD5	100	96.702	ENSODEG00000010262	CHD5	100	96.667	Octodon_degus
ENSHGLG00000018184	CHD5	96	77.051	ENSONIG00000000619	chd5	93	78.202	Oreochromis_niloticus
ENSHGLG00000018184	CHD5	99	71.977	ENSOANG00000001819	CHD5	98	73.049	Ornithorhynchus_anatinus
ENSHGLG00000018184	CHD5	99	93.497	ENSOGAG00000005703	CHD5	100	93.007	Otolemur_garnettii
ENSHGLG00000018184	CHD5	98	94.589	ENSOARG00000013425	CHD5	99	92.987	Ovis_aries
ENSHGLG00000018184	CHD5	99	95.760	ENSPPAG00000034048	CHD5	99	95.221	Pan_paniscus
ENSHGLG00000018184	CHD5	100	94.293	ENSPPRG00000009453	CHD5	100	94.115	Panthera_pardus
ENSHGLG00000018184	CHD5	100	87.468	ENSPTIG00000013926	CHD5	99	87.250	Panthera_tigris_altaica
ENSHGLG00000018184	CHD5	100	95.448	ENSPTRG00000000075	CHD5	100	95.192	Pan_troglodytes
ENSHGLG00000018184	CHD5	100	95.701	ENSPANG00000006765	CHD5	100	95.701	Papio_anubis
ENSHGLG00000018184	CHD5	97	77.964	ENSPKIG00000004282	chd5	98	78.340	Paramormyrops_kingsleyae
ENSHGLG00000018184	CHD5	98	82.623	ENSPSIG00000006414	CHD5	100	82.452	Pelodiscus_sinensis
ENSHGLG00000018184	CHD5	69	96.426	ENSPEMG00000014799	Chd5	100	96.371	Peromyscus_maniculatus_bairdii
ENSHGLG00000018184	CHD5	99	91.755	ENSPCIG00000028310	CHD5	100	89.214	Phascolarctos_cinereus
ENSHGLG00000018184	CHD5	97	75.725	ENSPLAG00000005343	chd5	93	84.211	Poecilia_latipinna
ENSHGLG00000018184	CHD5	96	97.402	ENSPPYG00000001952	CHD5	98	94.111	Pongo_abelii
ENSHGLG00000018184	CHD5	100	95.803	ENSPCOG00000022930	CHD5	100	95.803	Propithecus_coquereli
ENSHGLG00000018184	CHD5	97	77.844	ENSPNYG00000003183	chd5	98	78.017	Pundamilia_nyererei
ENSHGLG00000018184	CHD5	100	94.933	ENSRNOG00000011268	Chd5	100	94.268	Rattus_norvegicus
ENSHGLG00000018184	CHD5	97	97.081	ENSRBIG00000032140	CHD5	98	94.341	Rhinopithecus_bieti
ENSHGLG00000018184	CHD5	99	95.758	ENSRROG00000041146	CHD5	98	95.530	Rhinopithecus_roxellana
ENSHGLG00000018184	CHD5	99	91.671	ENSSBOG00000001955	CHD5	99	96.071	Saimiri_boliviensis_boliviensis
ENSHGLG00000018184	CHD5	99	85.797	ENSSHAG00000018641	CHD5	99	85.775	Sarcophilus_harrisii
ENSHGLG00000018184	CHD5	99	77.181	ENSSFOG00015006296	chd5	91	87.395	Scleropages_formosus
ENSHGLG00000018184	CHD5	97	78.622	ENSSDUG00000017526	chd5	98	79.128	Seriola_dumerili
ENSHGLG00000018184	CHD5	99	80.472	ENSSPUG00000010622	CHD5	99	79.564	Sphenodon_punctatus
ENSHGLG00000018184	CHD5	98	95.507	ENSSSCG00000003366	CHD5	100	95.927	Sus_scrofa
ENSHGLG00000018184	CHD5	96	82.973	ENSTGUG00000002634	-	100	84.477	Taeniopygia_guttata
ENSHGLG00000018184	CHD5	54	80.528	ENSTNIG00000004346	chd5	99	80.765	Tetraodon_nigroviridis
ENSHGLG00000018184	CHD5	100	93.358	ENSTTRG00000010468	CHD5	100	93.565	Tursiops_truncatus
ENSHGLG00000018184	CHD5	99	95.488	ENSUAMG00000024509	CHD5	98	95.183	Ursus_americanus
ENSHGLG00000018184	CHD5	99	90.340	ENSUMAG00000024173	CHD5	99	90.047	Ursus_maritimus
ENSHGLG00000018184	CHD5	99	94.589	ENSVVUG00000026480	CHD5	99	93.365	Vulpes_vulpes
ENSHGLG00000018184	CHD5	99	78.815	ENSXETG00000002904	chd5	99	80.332	Xenopus_tropicalis
ENSHGLG00000018184	CHD5	58	83.871	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus