EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000018311 (Gene tree)
Gene ID: -
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 31673 bases
Position: chrJH602047.1:8736911-8768583
Accession: 101696793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000025723	Beta-Casp	PF10996.8	9.3e-21	1	1
ENSHGLP00000025723	Lactamase_B	PF00753.27	1.5e-06	1	1
ENSHGLP00000025723	RMMBL	PF07521.12	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000025951	-	4847	XM_004837022	ENSHGLP00000025723	782 (aa)	XP_004837079	G5AZL8

Gene Model

Click here to download ENSHGLG00000018311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000018311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000018311	CPSF2	100	99.488	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSHGLG00000018311	CPSF2	100	85.932	ENSAPOG00000001242	cpsf2	100	85.932	Acanthochromis_polyacanthus
ENSHGLG00000018311	CPSF2	100	86.329	ENSACIG00000009331	cpsf2	100	86.329	Amphilophus_citrinellus
ENSHGLG00000018311	CPSF2	100	86.058	ENSAOCG00000014095	cpsf2	100	86.058	Amphiprion_ocellaris
ENSHGLG00000018311	CPSF2	100	86.058	ENSAPEG00000009158	cpsf2	100	86.058	Amphiprion_percula
ENSHGLG00000018311	CPSF2	96	86.316	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSHGLG00000018311	CPSF2	100	95.924	ENSAPLG00000006330	CPSF2	100	95.924	Anas_platyrhynchos
ENSHGLG00000018311	CPSF2	100	94.891	ENSACAG00000009245	CPSF2	100	94.891	Anolis_carolinensis
ENSHGLG00000018311	CPSF2	100	99.488	ENSANAG00000022915	CPSF2	100	99.488	Aotus_nancymaae
ENSHGLG00000018311	CPSF2	100	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSHGLG00000018311	CPSF2	100	99.488	ENSBTAG00000010227	CPSF2	100	99.488	Bos_taurus
ENSHGLG00000018311	CPSF2	100	41.569	WBGene00017313	cpsf-2	100	40.845	Caenorhabditis_elegans
ENSHGLG00000018311	CPSF2	100	99.488	ENSCJAG00000018069	CPSF2	100	99.488	Callithrix_jacchus
ENSHGLG00000018311	CPSF2	100	99.616	ENSCAFG00000010909	CPSF2	100	99.616	Canis_familiaris
ENSHGLG00000018311	CPSF2	100	99.616	ENSCAFG00020020670	CPSF2	100	99.616	Canis_lupus_dingo
ENSHGLG00000018311	CPSF2	100	99.488	ENSCHIG00000023848	CPSF2	100	99.488	Capra_hircus
ENSHGLG00000018311	CPSF2	100	98.338	ENSTSYG00000009036	CPSF2	100	98.338	Carlito_syrichta
ENSHGLG00000018311	CPSF2	100	99.744	ENSCPOG00000010899	CPSF2	100	99.744	Cavia_porcellus
ENSHGLG00000018311	CPSF2	100	99.488	ENSCCAG00000028088	CPSF2	100	99.488	Cebus_capucinus
ENSHGLG00000018311	CPSF2	100	99.616	ENSCATG00000030132	CPSF2	100	99.616	Cercocebus_atys
ENSHGLG00000018311	CPSF2	100	99.616	ENSCLAG00000012404	CPSF2	100	99.616	Chinchilla_lanigera
ENSHGLG00000018311	CPSF2	100	99.616	ENSCSAG00000011300	CPSF2	100	99.616	Chlorocebus_sabaeus
ENSHGLG00000018311	CPSF2	100	92.583	ENSCHOG00000012904	CPSF2	100	92.583	Choloepus_hoffmanni
ENSHGLG00000018311	CPSF2	100	96.552	ENSCPBG00000008766	CPSF2	97	96.552	Chrysemys_picta_bellii
ENSHGLG00000018311	CPSF2	100	54.795	ENSCING00000007881	-	100	54.421	Ciona_intestinalis
ENSHGLG00000018311	CPSF2	94	99.590	ENSCANG00000041651	CPSF2	100	99.590	Colobus_angolensis_palliatus
ENSHGLG00000018311	CPSF2	100	98.465	ENSCGRG00001006901	Cpsf2	100	98.465	Cricetulus_griseus_chok1gshd
ENSHGLG00000018311	CPSF2	100	98.465	ENSCGRG00000012416	Cpsf2	100	98.465	Cricetulus_griseus_crigri
ENSHGLG00000018311	CPSF2	100	83.904	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSHGLG00000018311	CPSF2	100	85.298	ENSCVAG00000000095	cpsf2	100	85.425	Cyprinodon_variegatus
ENSHGLG00000018311	CPSF2	100	85.696	ENSDARG00000028971	cpsf2	100	85.696	Danio_rerio
ENSHGLG00000018311	CPSF2	100	99.488	ENSDNOG00000042757	CPSF2	100	99.488	Dasypus_novemcinctus
ENSHGLG00000018311	CPSF2	100	99.361	ENSDORG00000013709	Cpsf2	100	99.361	Dipodomys_ordii
ENSHGLG00000018311	CPSF2	100	54.229	FBgn0027873	Cpsf100	100	53.990	Drosophila_melanogaster
ENSHGLG00000018311	CPSF2	100	90.421	ENSETEG00000012123	CPSF2	100	90.421	Echinops_telfairi
ENSHGLG00000018311	CPSF2	52	76.225	ENSEBUG00000012098	cpsf2	93	76.225	Eptatretus_burgeri
ENSHGLG00000018311	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSHGLG00000018311	CPSF2	100	99.488	ENSECAG00000023935	CPSF2	100	99.488	Equus_caballus
ENSHGLG00000018311	CPSF2	100	84.065	ENSELUG00000008442	cpsf2	100	84.065	Esox_lucius
ENSHGLG00000018311	CPSF2	100	99.488	ENSFCAG00000007886	CPSF2	100	99.488	Felis_catus
ENSHGLG00000018311	CPSF2	100	96.169	ENSFALG00000002412	CPSF2	100	96.169	Ficedula_albicollis
ENSHGLG00000018311	CPSF2	100	99.872	ENSFDAG00000006327	CPSF2	100	99.872	Fukomys_damarensis
ENSHGLG00000018311	CPSF2	96	84.575	ENSFHEG00000015465	cpsf2	98	84.837	Fundulus_heteroclitus
ENSHGLG00000018311	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSHGLG00000018311	CPSF2	100	95.402	ENSGALG00000010783	CPSF2	100	95.913	Gallus_gallus
ENSHGLG00000018311	CPSF2	100	85.551	ENSGAFG00000001407	cpsf2	100	85.551	Gambusia_affinis
ENSHGLG00000018311	CPSF2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSHGLG00000018311	CPSF2	100	96.679	ENSGAGG00000008287	CPSF2	100	96.679	Gopherus_agassizii
ENSHGLG00000018311	CPSF2	100	99.488	ENSGGOG00000011799	CPSF2	100	99.488	Gorilla_gorilla
ENSHGLG00000018311	CPSF2	100	85.298	ENSHBUG00000023466	cpsf2	100	85.298	Haplochromis_burtoni
ENSHGLG00000018311	CPSF2	100	100.000	ENSHGLG00100016460	CPSF2	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000018311	CPSF2	100	84.664	ENSHCOG00000019527	cpsf2	98	84.664	Hippocampus_comes
ENSHGLG00000018311	CPSF2	100	85.769	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSHGLG00000018311	CPSF2	100	99.616	ENSSTOG00000009528	CPSF2	100	99.616	Ictidomys_tridecemlineatus
ENSHGLG00000018311	CPSF2	100	99.233	ENSJJAG00000017925	Cpsf2	100	99.233	Jaculus_jaculus
ENSHGLG00000018311	CPSF2	100	84.791	ENSKMAG00000019429	cpsf2	100	84.791	Kryptolebias_marmoratus
ENSHGLG00000018311	CPSF2	95	84.203	ENSLBEG00000011585	cpsf2	100	84.358	Labrus_bergylta
ENSHGLG00000018311	CPSF2	100	89.527	ENSLACG00000019024	CPSF2	100	89.783	Latimeria_chalumnae
ENSHGLG00000018311	CPSF2	100	87.706	ENSLOCG00000014102	cpsf2	100	87.706	Lepisosteus_oculatus
ENSHGLG00000018311	CPSF2	100	99.235	ENSLAFG00000004891	CPSF2	100	99.235	Loxodonta_africana
ENSHGLG00000018311	CPSF2	100	99.616	ENSMFAG00000041212	CPSF2	100	99.616	Macaca_fascicularis
ENSHGLG00000018311	CPSF2	100	99.616	ENSMMUG00000000699	CPSF2	100	99.616	Macaca_mulatta
ENSHGLG00000018311	CPSF2	100	99.616	ENSMNEG00000031584	CPSF2	100	99.616	Macaca_nemestrina
ENSHGLG00000018311	CPSF2	100	99.616	ENSMLEG00000029394	CPSF2	100	99.616	Mandrillus_leucophaeus
ENSHGLG00000018311	CPSF2	100	85.932	ENSMAMG00000004235	cpsf2	100	85.932	Mastacembelus_armatus
ENSHGLG00000018311	CPSF2	100	85.425	ENSMZEG00005001769	cpsf2	100	85.425	Maylandia_zebra
ENSHGLG00000018311	CPSF2	100	95.408	ENSMGAG00000013122	CPSF2	100	95.918	Meleagris_gallopavo
ENSHGLG00000018311	CPSF2	100	98.465	ENSMAUG00000015160	Cpsf2	100	98.465	Mesocricetus_auratus
ENSHGLG00000018311	CPSF2	100	99.488	ENSMICG00000016441	CPSF2	100	99.488	Microcebus_murinus
ENSHGLG00000018311	CPSF2	100	98.465	ENSMOCG00000015372	Cpsf2	100	98.465	Microtus_ochrogaster
ENSHGLG00000018311	CPSF2	100	81.242	ENSMMOG00000015590	cpsf2	100	81.242	Mola_mola
ENSHGLG00000018311	CPSF2	100	98.849	ENSMODG00000002042	CPSF2	100	98.849	Monodelphis_domestica
ENSHGLG00000018311	CPSF2	100	82.763	ENSMALG00000022275	cpsf2	100	82.763	Monopterus_albus
ENSHGLG00000018311	CPSF2	100	97.954	ENSMUSG00000041781	Cpsf2	100	97.954	Mus_musculus
ENSHGLG00000018311	CPSF2	100	98.210	MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	Mus_pahari
ENSHGLG00000018311	CPSF2	100	97.954	MGP_SPRETEiJ_G0018877	Cpsf2	100	97.954	Mus_spretus
ENSHGLG00000018311	CPSF2	100	99.616	ENSMPUG00000007617	CPSF2	98	99.616	Mustela_putorius_furo
ENSHGLG00000018311	CPSF2	100	98.849	ENSMLUG00000005570	CPSF2	100	98.849	Myotis_lucifugus
ENSHGLG00000018311	CPSF2	100	98.977	ENSNGAG00000020312	Cpsf2	100	98.977	Nannospalax_galili
ENSHGLG00000018311	CPSF2	100	85.805	ENSNBRG00000022402	cpsf2	100	85.805	Neolamprologus_brichardi
ENSHGLG00000018311	CPSF2	100	98.593	ENSNLEG00000017132	CPSF2	100	98.593	Nomascus_leucogenys
ENSHGLG00000018311	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSHGLG00000018311	CPSF2	94	91.530	ENSOPRG00000008484	-	100	91.530	Ochotona_princeps
ENSHGLG00000018311	CPSF2	100	99.361	ENSODEG00000008682	CPSF2	100	99.361	Octodon_degus
ENSHGLG00000018311	CPSF2	100	86.185	ENSONIG00000005901	cpsf2	100	86.185	Oreochromis_niloticus
ENSHGLG00000018311	CPSF2	100	98.465	ENSOANG00000003822	CPSF2	100	98.465	Ornithorhynchus_anatinus
ENSHGLG00000018311	CPSF2	100	99.233	ENSOCUG00000005713	CPSF2	100	99.233	Oryctolagus_cuniculus
ENSHGLG00000018311	CPSF2	100	80.101	ENSORLG00000011628	cpsf2	100	80.101	Oryzias_latipes
ENSHGLG00000018311	CPSF2	100	84.918	ENSORLG00020016980	cpsf2	100	84.918	Oryzias_latipes_hni
ENSHGLG00000018311	CPSF2	100	84.918	ENSORLG00015011910	cpsf2	100	84.918	Oryzias_latipes_hsok
ENSHGLG00000018311	CPSF2	100	84.157	ENSOMEG00000022876	cpsf2	100	84.157	Oryzias_melastigma
ENSHGLG00000018311	CPSF2	100	96.429	ENSOARG00000012889	CPSF2	100	96.429	Ovis_aries
ENSHGLG00000018311	CPSF2	100	99.488	ENSPPAG00000039666	CPSF2	100	99.488	Pan_paniscus
ENSHGLG00000018311	CPSF2	99	99.488	ENSPPRG00000010869	CPSF2	100	99.488	Panthera_pardus
ENSHGLG00000018311	CPSF2	100	99.488	ENSPTIG00000021202	CPSF2	100	99.488	Panthera_tigris_altaica
ENSHGLG00000018311	CPSF2	100	99.488	ENSPTRG00000006651	CPSF2	100	99.488	Pan_troglodytes
ENSHGLG00000018311	CPSF2	100	99.616	ENSPANG00000017417	CPSF2	100	99.616	Papio_anubis
ENSHGLG00000018311	CPSF2	100	82.211	ENSPKIG00000021453	cpsf2	100	82.211	Paramormyrops_kingsleyae
ENSHGLG00000018311	CPSF2	100	95.785	ENSPSIG00000006289	CPSF2	100	95.785	Pelodiscus_sinensis
ENSHGLG00000018311	CPSF2	76	79.734	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSHGLG00000018311	CPSF2	100	98.721	ENSPEMG00000007917	Cpsf2	100	98.721	Peromyscus_maniculatus_bairdii
ENSHGLG00000018311	CPSF2	100	74.210	ENSPMAG00000006205	cpsf2	100	74.210	Petromyzon_marinus
ENSHGLG00000018311	CPSF2	100	98.849	ENSPCIG00000011393	CPSF2	100	98.849	Phascolarctos_cinereus
ENSHGLG00000018311	CPSF2	100	85.425	ENSPFOG00000018648	cpsf2	100	85.425	Poecilia_formosa
ENSHGLG00000018311	CPSF2	100	85.425	ENSPLAG00000019199	cpsf2	99	85.425	Poecilia_latipinna
ENSHGLG00000018311	CPSF2	96	85.789	ENSPMEG00000012100	cpsf2	100	85.160	Poecilia_mexicana
ENSHGLG00000018311	CPSF2	100	85.298	ENSPREG00000008960	cpsf2	100	85.298	Poecilia_reticulata
ENSHGLG00000018311	CPSF2	63	99.194	ENSPPYG00000029685	-	100	99.194	Pongo_abelii
ENSHGLG00000018311	CPSF2	100	99.105	ENSPCAG00000012477	CPSF2	100	99.105	Procavia_capensis
ENSHGLG00000018311	CPSF2	100	99.488	ENSPCOG00000026387	CPSF2	100	99.488	Propithecus_coquereli
ENSHGLG00000018311	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSHGLG00000018311	CPSF2	100	85.443	ENSPNYG00000023356	cpsf2	100	85.443	Pundamilia_nyererei
ENSHGLG00000018311	CPSF2	100	86.912	ENSPNAG00000001849	cpsf2	100	86.912	Pygocentrus_nattereri
ENSHGLG00000018311	CPSF2	100	98.338	ENSRNOG00000005733	Cpsf2	100	98.338	Rattus_norvegicus
ENSHGLG00000018311	CPSF2	100	99.616	ENSRBIG00000044792	CPSF2	100	99.616	Rhinopithecus_bieti
ENSHGLG00000018311	CPSF2	100	99.616	ENSRROG00000034875	CPSF2	100	99.616	Rhinopithecus_roxellana
ENSHGLG00000018311	CPSF2	100	99.488	ENSSBOG00000024571	CPSF2	100	99.488	Saimiri_boliviensis_boliviensis
ENSHGLG00000018311	CPSF2	100	98.977	ENSSHAG00000010458	CPSF2	100	98.977	Sarcophilus_harrisii
ENSHGLG00000018311	CPSF2	100	87.294	ENSSFOG00015002117	cpsf2	100	87.294	Scleropages_formosus
ENSHGLG00000018311	CPSF2	100	84.157	ENSSMAG00000002001	cpsf2	100	84.157	Scophthalmus_maximus
ENSHGLG00000018311	CPSF2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSHGLG00000018311	CPSF2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSHGLG00000018311	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSHGLG00000018311	CPSF2	100	95.658	ENSSPUG00000013485	CPSF2	100	95.658	Sphenodon_punctatus
ENSHGLG00000018311	CPSF2	100	85.298	ENSSPAG00000013284	cpsf2	100	85.298	Stegastes_partitus
ENSHGLG00000018311	CPSF2	100	99.488	ENSSSCG00000002447	CPSF2	100	99.488	Sus_scrofa
ENSHGLG00000018311	CPSF2	100	96.296	ENSTGUG00000012571	-	100	96.296	Taeniopygia_guttata
ENSHGLG00000018311	CPSF2	100	84.664	ENSTRUG00000003742	cpsf2	100	84.664	Takifugu_rubripes
ENSHGLG00000018311	CPSF2	100	83.565	ENSTNIG00000012228	cpsf2	100	84.324	Tetraodon_nigroviridis
ENSHGLG00000018311	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSHGLG00000018311	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSHGLG00000018311	CPSF2	100	99.744	ENSUAMG00000028071	CPSF2	100	99.744	Ursus_americanus
ENSHGLG00000018311	CPSF2	100	99.744	ENSUMAG00000005029	CPSF2	100	100.000	Ursus_maritimus
ENSHGLG00000018311	CPSF2	99	99.616	ENSVPAG00000003503	CPSF2	100	99.616	Vicugna_pacos
ENSHGLG00000018311	CPSF2	100	99.616	ENSVVUG00000024642	CPSF2	100	99.616	Vulpes_vulpes
ENSHGLG00000018311	CPSF2	100	91.954	ENSXETG00000010289	cpsf2	100	91.954	Xenopus_tropicalis
ENSHGLG00000018311	CPSF2	100	85.805	ENSXCOG00000001764	cpsf2	100	85.805	Xiphophorus_couchianus
ENSHGLG00000018311	CPSF2	100	85.932	ENSXMAG00000017048	cpsf2	100	85.932	Xiphophorus_maculatus