EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000018387 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 884 bases
Position: chrJH602117.1:3084-3967
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000025834	RRM_1	PF00076.22	1.1e-05	1	1
ENSHGLP00000025833	La	PF05383.17	2.1e-21	1	1
ENSHGLP00000025834	La	PF05383.17	2.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000026063	-	489	-	ENSHGLP00000025834	162 (aa)	-	-
ENSHGLT00000026062	-	447	-	ENSHGLP00000025833	148 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000018387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000018387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000018387	-	97	89.873	ENSHGLG00000001810	-	72	89.873
ENSHGLG00000018387	-	96	92.308	ENSHGLG00000011331	-	98	92.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000018387	-	100	94.068	ENSG00000138385	SSB	89	94.393	Homo_sapiens
ENSHGLG00000018387	-	95	63.871	ENSACIG00000001738	ssb	88	61.789	Amphilophus_citrinellus
ENSHGLG00000018387	-	100	94.915	ENSCJAG00000045073	SSB	88	93.277	Callithrix_jacchus
ENSHGLG00000018387	-	100	94.068	ENSCCAG00000035147	SSB	86	94.783	Cebus_capucinus
ENSHGLG00000018387	-	100	93.865	ENSCLAG00000004563	-	100	93.865	Chinchilla_lanigera
ENSHGLG00000018387	-	79	65.254	ENSFHEG00000003003	-	100	65.254	Fundulus_heteroclitus
ENSHGLG00000018387	-	80	96.154	ENSGGOG00000011507	-	88	96.154	Gorilla_gorilla
ENSHGLG00000018387	-	100	38.272	ENSGGOG00000023471	-	54	38.272	Gorilla_gorilla
ENSHGLG00000018387	-	78	100.000	ENSHGLG00100006391	-	97	92.969	Heterocephalus_glaber_male
ENSHGLG00000018387	-	78	92.241	ENSHGLG00100003175	-	99	91.453	Heterocephalus_glaber_male
ENSHGLG00000018387	-	93	76.000	ENSHGLG00100008353	-	65	76.000	Heterocephalus_glaber_male
ENSHGLG00000018387	-	94	94.118	ENSHGLG00100014205	-	85	94.118	Heterocephalus_glaber_male
ENSHGLG00000018387	-	82	90.984	ENSHGLG00100013137	-	75	94.262	Heterocephalus_glaber_male
ENSHGLG00000018387	-	97	93.038	ENSHGLG00100007213	-	81	93.038	Heterocephalus_glaber_male
ENSHGLG00000018387	-	99	66.942	ENSLAFG00000026721	-	51	71.242	Loxodonta_africana
ENSHGLG00000018387	-	100	94.068	ENSMFAG00000039066	SSB	93	88.095	Macaca_fascicularis
ENSHGLG00000018387	-	100	94.068	ENSMMUG00000023051	SSB	93	88.095	Macaca_mulatta
ENSHGLG00000018387	-	97	94.937	ENSMNEG00000028321	SSB	93	88.095	Macaca_nemestrina
ENSHGLG00000018387	-	100	94.068	ENSMLEG00000035717	SSB	88	94.783	Mandrillus_leucophaeus
ENSHGLG00000018387	-	97	78.481	ENSMGAG00000010328	SSB	77	78.481	Meleagris_gallopavo
ENSHGLG00000018387	-	93	90.066	ENSMAUG00000019529	-	99	90.066	Mesocricetus_auratus
ENSHGLG00000018387	-	93	88.742	ENSMOCG00000001823	-	99	88.742	Microtus_ochrogaster
ENSHGLG00000018387	-	77	63.478	ENSMMOG00000002088	-	88	63.478	Mola_mola
ENSHGLG00000018387	-	99	88.136	MGP_CAROLIEiJ_G0023629	-	99	85.802	Mus_caroli
ENSHGLG00000018387	-	99	88.136	ENSMUSG00000068882	Ssb	100	85.890	Mus_musculus
ENSHGLG00000018387	-	99	89.831	MGP_PahariEiJ_G0025081	-	100	87.117	Mus_pahari
ENSHGLG00000018387	-	99	88.136	MGP_SPRETEiJ_G0024551	Ssb	100	85.890	Mus_spretus
ENSHGLG00000018387	-	77	93.043	ENSNGAG00000012920	-	82	93.043	Nannospalax_galili
ENSHGLG00000018387	-	100	94.068	ENSNLEG00000004958	SSB	89	92.437	Nomascus_leucogenys
ENSHGLG00000018387	-	83	87.500	ENSMEUG00000001650	-	55	87.500	Notamacropus_eugenii
ENSHGLG00000018387	-	98	76.506	ENSODEG00000006639	-	90	76.506	Octodon_degus
ENSHGLG00000018387	-	97	95.570	ENSODEG00000010185	-	100	90.798	Octodon_degus
ENSHGLG00000018387	-	96	90.446	ENSODEG00000010041	-	95	90.446	Octodon_degus
ENSHGLG00000018387	-	99	85.965	ENSPPAG00000032427	-	100	85.271	Pan_paniscus
ENSHGLG00000018387	-	100	94.068	ENSPPAG00000042673	SSB	89	92.437	Pan_paniscus
ENSHGLG00000018387	-	100	94.068	ENSPTRG00000012620	SSB	89	92.437	Pan_troglodytes
ENSHGLG00000018387	-	100	94.068	ENSPANG00000007440	SSB	93	88.095	Papio_anubis
ENSHGLG00000018387	-	93	90.066	ENSPEMG00000021746	-	99	90.066	Peromyscus_maniculatus_bairdii
ENSHGLG00000018387	-	79	81.395	ENSPCIG00000016333	-	92	81.395	Phascolarctos_cinereus
ENSHGLG00000018387	-	100	87.879	ENSPCOG00000015741	-	92	87.931	Propithecus_coquereli
ENSHGLG00000018387	-	100	94.068	ENSRBIG00000041972	SSB	88	94.783	Rhinopithecus_bieti
ENSHGLG00000018387	-	80	83.969	ENSRBIG00000041232	-	82	83.969	Rhinopithecus_bieti
ENSHGLG00000018387	-	100	94.068	ENSRROG00000040346	SSB	93	88.095	Rhinopithecus_roxellana
ENSHGLG00000018387	-	94	81.818	ENSRROG00000031684	-	89	81.169	Rhinopithecus_roxellana
ENSHGLG00000018387	-	100	94.068	ENSSBOG00000027204	SSB	86	94.783	Saimiri_boliviensis_boliviensis
ENSHGLG00000018387	-	95	61.290	ENSXCOG00000019109	ssb	93	60.156	Xiphophorus_couchianus