EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000018430 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 26778 bases
Position: chrJH602239.1:871000-897777
Accession: 101712635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000025895	CPSF_A	PF03178.15	5.7e-86	1	1
ENSHGLP00000025896	CPSF_A	PF03178.15	1.2e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000026124	-	8010	XM_004874353	ENSHGLP00000025895	1140 (aa)	XP_004874410	A0A0N8EST0
ENSHGLT00000026125	-	3288	-	ENSHGLP00000025896	1095 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000018430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000018430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000018430	DDB1	100	99.035	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSHGLG00000018430	DDB1	98	91.375	ENSAPOG00000005036	ddb1	99	91.327	Acanthochromis_polyacanthus
ENSHGLG00000018430	DDB1	100	99.123	ENSAMEG00000016518	DDB1	100	99.123	Ailuropoda_melanoleuca
ENSHGLG00000018430	DDB1	86	91.633	ENSACIG00000020624	ddb1	99	91.633	Amphilophus_citrinellus
ENSHGLG00000018430	DDB1	100	91.053	ENSAOCG00000003066	ddb1	100	91.053	Amphiprion_ocellaris
ENSHGLG00000018430	DDB1	100	91.228	ENSAPEG00000000092	ddb1	100	91.228	Amphiprion_percula
ENSHGLG00000018430	DDB1	94	91.535	ENSATEG00000020571	ddb1	97	91.535	Anabas_testudineus
ENSHGLG00000018430	DDB1	98	96.089	ENSAPLG00000007174	DDB1	99	96.089	Anas_platyrhynchos
ENSHGLG00000018430	DDB1	100	96.667	ENSACAG00000017758	DDB1	100	96.667	Anolis_carolinensis
ENSHGLG00000018430	DDB1	100	99.035	ENSANAG00000021878	DDB1	100	99.035	Aotus_nancymaae
ENSHGLG00000018430	DDB1	100	91.316	ENSACLG00000012401	ddb1	100	91.316	Astatotilapia_calliptera
ENSHGLG00000018430	DDB1	100	98.947	ENSBTAG00000021569	DDB1	93	98.947	Bos_taurus
ENSHGLG00000018430	DDB1	100	36.869	WBGene00010890	ddb-1	100	36.784	Caenorhabditis_elegans
ENSHGLG00000018430	DDB1	100	99.035	ENSCJAG00000019319	DDB1	100	99.035	Callithrix_jacchus
ENSHGLG00000018430	DDB1	100	99.123	ENSCAFG00000016264	DDB1	100	99.123	Canis_familiaris
ENSHGLG00000018430	DDB1	94	98.884	ENSCAFG00020012722	DDB1	99	98.884	Canis_lupus_dingo
ENSHGLG00000018430	DDB1	100	98.947	ENSCHIG00000014969	DDB1	100	98.947	Capra_hircus
ENSHGLG00000018430	DDB1	100	98.684	ENSTSYG00000008027	DDB1	100	98.684	Carlito_syrichta
ENSHGLG00000018430	DDB1	98	99.106	ENSCAPG00000010786	DDB1	100	99.106	Cavia_aperea
ENSHGLG00000018430	DDB1	100	99.123	ENSCPOG00000009956	DDB1	100	99.123	Cavia_porcellus
ENSHGLG00000018430	DDB1	100	99.035	ENSCCAG00000035883	DDB1	100	99.035	Cebus_capucinus
ENSHGLG00000018430	DDB1	100	96.528	ENSCATG00000044495	DDB1	100	96.528	Cercocebus_atys
ENSHGLG00000018430	DDB1	100	99.298	ENSCLAG00000004126	DDB1	100	99.298	Chinchilla_lanigera
ENSHGLG00000018430	DDB1	100	99.035	ENSCSAG00000006392	DDB1	100	99.035	Chlorocebus_sabaeus
ENSHGLG00000018430	DDB1	88	92.424	ENSCHOG00000011377	DDB1	90	92.424	Choloepus_hoffmanni
ENSHGLG00000018430	DDB1	100	97.544	ENSCPBG00000017728	DDB1	100	97.544	Chrysemys_picta_bellii
ENSHGLG00000018430	DDB1	100	61.806	ENSCING00000007437	-	100	61.719	Ciona_intestinalis
ENSHGLG00000018430	DDB1	94	60.184	ENSCSAVG00000004783	-	100	60.184	Ciona_savignyi
ENSHGLG00000018430	DDB1	100	99.035	ENSCANG00000019948	DDB1	100	99.035	Colobus_angolensis_palliatus
ENSHGLG00000018430	DDB1	100	99.211	ENSCGRG00001016599	Ddb1	100	99.211	Cricetulus_griseus_chok1gshd
ENSHGLG00000018430	DDB1	100	99.211	ENSCGRG00000013427	Ddb1	100	99.211	Cricetulus_griseus_crigri
ENSHGLG00000018430	DDB1	93	90.858	ENSCSEG00000012499	ddb1	99	89.271	Cynoglossus_semilaevis
ENSHGLG00000018430	DDB1	94	91.240	ENSCVAG00000019531	ddb1	99	91.240	Cyprinodon_variegatus
ENSHGLG00000018430	DDB1	100	88.354	ENSDARG00000074431	ddb1	100	88.354	Danio_rerio
ENSHGLG00000018430	DDB1	94	98.791	ENSDNOG00000014884	DDB1	97	98.791	Dasypus_novemcinctus
ENSHGLG00000018430	DDB1	88	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSHGLG00000018430	DDB1	100	60.699	FBgn0260962	pic	100	60.490	Drosophila_melanogaster
ENSHGLG00000018430	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSHGLG00000018430	DDB1	78	84.702	ENSEBUG00000014593	ddb1	97	84.702	Eptatretus_burgeri
ENSHGLG00000018430	DDB1	100	98.947	ENSEASG00005008184	DDB1	100	98.947	Equus_asinus_asinus
ENSHGLG00000018430	DDB1	100	98.860	ENSECAG00000012136	DDB1	100	98.860	Equus_caballus
ENSHGLG00000018430	DDB1	62	31.285	ENSEEUG00000015611	SF3B3	58	31.285	Erinaceus_europaeus
ENSHGLG00000018430	DDB1	85	96.633	ENSEEUG00000003194	DDB1	85	96.633	Erinaceus_europaeus
ENSHGLG00000018430	DDB1	100	91.053	ENSELUG00000023868	ddb1	100	91.053	Esox_lucius
ENSHGLG00000018430	DDB1	100	99.123	ENSFCAG00000029716	DDB1	100	99.123	Felis_catus
ENSHGLG00000018430	DDB1	100	96.500	ENSFALG00000011981	DDB1	100	96.500	Ficedula_albicollis
ENSHGLG00000018430	DDB1	100	99.386	ENSFDAG00000005128	DDB1	100	99.386	Fukomys_damarensis
ENSHGLG00000018430	DDB1	90	92.800	ENSFHEG00000022133	ddb1	98	92.800	Fundulus_heteroclitus
ENSHGLG00000018430	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSHGLG00000018430	DDB1	100	96.667	ENSGALG00000042333	DDB1	100	96.667	Gallus_gallus
ENSHGLG00000018430	DDB1	94	91.053	ENSGAFG00000013142	ddb1	99	91.053	Gambusia_affinis
ENSHGLG00000018430	DDB1	96	90.376	ENSGACG00000017182	ddb1	100	90.376	Gasterosteus_aculeatus
ENSHGLG00000018430	DDB1	95	97.417	ENSGAGG00000014124	DDB1	100	97.417	Gopherus_agassizii
ENSHGLG00000018430	DDB1	100	99.035	ENSGGOG00000004052	DDB1	100	99.035	Gorilla_gorilla
ENSHGLG00000018430	DDB1	100	91.316	ENSHBUG00000008873	ddb1	100	91.316	Haplochromis_burtoni
ENSHGLG00000018430	DDB1	100	98.904	ENSHGLG00100014475	DDB1	100	98.904	Heterocephalus_glaber_male
ENSHGLG00000018430	DDB1	94	90.799	ENSHCOG00000018670	ddb1	98	90.799	Hippocampus_comes
ENSHGLG00000018430	DDB1	100	90.526	ENSIPUG00000005612	DDB1	100	90.526	Ictalurus_punctatus
ENSHGLG00000018430	DDB1	100	99.035	ENSSTOG00000007552	DDB1	100	99.035	Ictidomys_tridecemlineatus
ENSHGLG00000018430	DDB1	100	98.860	ENSJJAG00000017769	Ddb1	100	98.860	Jaculus_jaculus
ENSHGLG00000018430	DDB1	94	91.146	ENSKMAG00000002315	ddb1	99	91.146	Kryptolebias_marmoratus
ENSHGLG00000018430	DDB1	85	91.295	ENSLBEG00000017065	ddb1	99	91.295	Labrus_bergylta
ENSHGLG00000018430	DDB1	100	93.170	ENSLACG00000017611	DDB1	100	93.170	Latimeria_chalumnae
ENSHGLG00000018430	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSHGLG00000018430	DDB1	100	98.947	ENSLAFG00000011513	DDB1	100	98.947	Loxodonta_africana
ENSHGLG00000018430	DDB1	100	99.035	ENSMFAG00000042035	DDB1	100	99.035	Macaca_fascicularis
ENSHGLG00000018430	DDB1	99	99.027	ENSMMUG00000002691	DDB1	99	99.027	Macaca_mulatta
ENSHGLG00000018430	DDB1	100	99.035	ENSMNEG00000031559	DDB1	100	99.035	Macaca_nemestrina
ENSHGLG00000018430	DDB1	100	99.035	ENSMLEG00000044136	DDB1	100	99.035	Mandrillus_leucophaeus
ENSHGLG00000018430	DDB1	100	91.404	ENSMAMG00000014372	ddb1	100	91.404	Mastacembelus_armatus
ENSHGLG00000018430	DDB1	100	91.228	ENSMZEG00005013835	ddb1	100	91.228	Maylandia_zebra
ENSHGLG00000018430	DDB1	94	95.996	ENSMGAG00000004990	DDB1	100	95.996	Meleagris_gallopavo
ENSHGLG00000018430	DDB1	100	99.211	ENSMAUG00000012926	Ddb1	100	99.211	Mesocricetus_auratus
ENSHGLG00000018430	DDB1	100	99.035	ENSMICG00000013703	DDB1	100	99.035	Microcebus_murinus
ENSHGLG00000018430	DDB1	100	98.947	ENSMOCG00000020499	Ddb1	100	98.947	Microtus_ochrogaster
ENSHGLG00000018430	DDB1	86	91.633	ENSMMOG00000001758	ddb1	99	91.633	Mola_mola
ENSHGLG00000018430	DDB1	100	88.581	ENSMODG00000020353	DDB1	100	88.581	Monodelphis_domestica
ENSHGLG00000018430	DDB1	100	91.316	ENSMALG00000014071	ddb1	100	91.316	Monopterus_albus
ENSHGLG00000018430	DDB1	100	99.123	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.123	Mus_caroli
ENSHGLG00000018430	DDB1	100	98.947	ENSMUSG00000024740	Ddb1	100	98.947	Mus_musculus
ENSHGLG00000018430	DDB1	100	99.123	MGP_PahariEiJ_G0014189	Ddb1	100	99.123	Mus_pahari
ENSHGLG00000018430	DDB1	100	99.035	MGP_SPRETEiJ_G0023609	Ddb1	100	99.035	Mus_spretus
ENSHGLG00000018430	DDB1	100	95.789	ENSMPUG00000014200	DDB1	100	95.789	Mustela_putorius_furo
ENSHGLG00000018430	DDB1	100	98.684	ENSMLUG00000013232	DDB1	100	98.684	Myotis_lucifugus
ENSHGLG00000018430	DDB1	100	98.947	ENSNGAG00000009384	Ddb1	100	98.947	Nannospalax_galili
ENSHGLG00000018430	DDB1	100	91.404	ENSNBRG00000019581	ddb1	100	91.404	Neolamprologus_brichardi
ENSHGLG00000018430	DDB1	100	95.920	ENSNLEG00000002022	DDB1	100	95.920	Nomascus_leucogenys
ENSHGLG00000018430	DDB1	90	98.944	ENSMEUG00000001099	DDB1	92	98.944	Notamacropus_eugenii
ENSHGLG00000018430	DDB1	90	90.398	ENSOPRG00000008254	DDB1	90	90.398	Ochotona_princeps
ENSHGLG00000018430	DDB1	100	98.947	ENSODEG00000002419	DDB1	100	98.947	Octodon_degus
ENSHGLG00000018430	DDB1	100	91.404	ENSONIG00000005804	ddb1	100	91.404	Oreochromis_niloticus
ENSHGLG00000018430	DDB1	91	97.578	ENSOANG00000004897	DDB1	100	97.578	Ornithorhynchus_anatinus
ENSHGLG00000018430	DDB1	100	99.035	ENSOCUG00000001667	DDB1	100	99.035	Oryctolagus_cuniculus
ENSHGLG00000018430	DDB1	96	89.826	ENSORLG00000001399	ddb1	98	91.066	Oryzias_latipes
ENSHGLG00000018430	DDB1	96	89.734	ENSORLG00020001277	ddb1	97	89.734	Oryzias_latipes_hni
ENSHGLG00000018430	DDB1	94	90.884	ENSORLG00015002080	ddb1	99	90.884	Oryzias_latipes_hsok
ENSHGLG00000018430	DDB1	96	89.699	ENSOMEG00000006181	ddb1	99	89.699	Oryzias_melastigma
ENSHGLG00000018430	DDB1	100	98.860	ENSOGAG00000016103	DDB1	100	98.860	Otolemur_garnettii
ENSHGLG00000018430	DDB1	99	98.931	ENSOARG00000011716	DDB1	98	98.931	Ovis_aries
ENSHGLG00000018430	DDB1	100	99.035	ENSPPAG00000035343	DDB1	100	99.035	Pan_paniscus
ENSHGLG00000018430	DDB1	100	99.123	ENSPPRG00000013300	DDB1	100	99.123	Panthera_pardus
ENSHGLG00000018430	DDB1	98	99.106	ENSPTIG00000006909	DDB1	98	99.106	Panthera_tigris_altaica
ENSHGLG00000018430	DDB1	100	99.035	ENSPTRG00000003737	DDB1	100	99.035	Pan_troglodytes
ENSHGLG00000018430	DDB1	100	99.035	ENSPANG00000000242	DDB1	100	99.035	Papio_anubis
ENSHGLG00000018430	DDB1	94	91.053	ENSPKIG00000019213	ddb1	94	91.053	Paramormyrops_kingsleyae
ENSHGLG00000018430	DDB1	98	96.619	ENSPSIG00000013275	DDB1	100	96.619	Pelodiscus_sinensis
ENSHGLG00000018430	DDB1	86	91.327	ENSPMGG00000021179	ddb1	99	91.327	Periophthalmus_magnuspinnatus
ENSHGLG00000018430	DDB1	100	99.211	ENSPEMG00000012241	Ddb1	100	99.211	Peromyscus_maniculatus_bairdii
ENSHGLG00000018430	DDB1	89	86.542	ENSPMAG00000008479	ddb1	100	86.542	Petromyzon_marinus
ENSHGLG00000018430	DDB1	100	98.596	ENSPCIG00000002643	DDB1	100	98.596	Phascolarctos_cinereus
ENSHGLG00000018430	DDB1	100	90.798	ENSPFOG00000002768	ddb1	100	90.798	Poecilia_formosa
ENSHGLG00000018430	DDB1	100	90.614	ENSPLAG00000017227	ddb1	100	90.614	Poecilia_latipinna
ENSHGLG00000018430	DDB1	100	90.614	ENSPMEG00000011398	ddb1	100	90.614	Poecilia_mexicana
ENSHGLG00000018430	DDB1	94	91.163	ENSPREG00000004440	ddb1	98	91.163	Poecilia_reticulata
ENSHGLG00000018430	DDB1	100	94.154	ENSPPYG00000003193	DDB1	100	94.154	Pongo_abelii
ENSHGLG00000018430	DDB1	85	98.806	ENSPCAG00000011040	DDB1	85	98.806	Procavia_capensis
ENSHGLG00000018430	DDB1	100	97.461	ENSPCOG00000015176	DDB1	100	97.461	Propithecus_coquereli
ENSHGLG00000018430	DDB1	100	98.947	ENSPVAG00000003847	DDB1	100	98.947	Pteropus_vampyrus
ENSHGLG00000018430	DDB1	50	89.680	ENSPNYG00000010482	ddb1	100	90.036	Pundamilia_nyererei
ENSHGLG00000018430	DDB1	94	91.146	ENSPNAG00000006635	ddb1	97	91.146	Pygocentrus_nattereri
ENSHGLG00000018430	DDB1	100	99.123	ENSRNOG00000020715	Ddb1	100	99.123	Rattus_norvegicus
ENSHGLG00000018430	DDB1	100	99.035	ENSRBIG00000033611	DDB1	100	99.035	Rhinopithecus_bieti
ENSHGLG00000018430	DDB1	100	99.035	ENSRROG00000041407	DDB1	100	99.035	Rhinopithecus_roxellana
ENSHGLG00000018430	DDB1	100	98.947	ENSSBOG00000019775	DDB1	100	98.947	Saimiri_boliviensis_boliviensis
ENSHGLG00000018430	DDB1	94	96.262	ENSSHAG00000011600	DDB1	100	96.262	Sarcophilus_harrisii
ENSHGLG00000018430	DDB1	94	91.171	ENSSFOG00015011151	ddb1	97	91.171	Scleropages_formosus
ENSHGLG00000018430	DDB1	100	90.965	ENSSMAG00000009495	ddb1	100	90.965	Scophthalmus_maximus
ENSHGLG00000018430	DDB1	100	91.316	ENSSDUG00000004642	ddb1	100	91.316	Seriola_dumerili
ENSHGLG00000018430	DDB1	100	91.316	ENSSLDG00000015804	ddb1	100	91.316	Seriola_lalandi_dorsalis
ENSHGLG00000018430	DDB1	72	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSHGLG00000018430	DDB1	100	97.368	ENSSPUG00000019338	DDB1	100	97.368	Sphenodon_punctatus
ENSHGLG00000018430	DDB1	94	91.442	ENSSPAG00000009888	ddb1	99	91.442	Stegastes_partitus
ENSHGLG00000018430	DDB1	100	98.070	ENSSSCG00000013094	DDB1	100	98.070	Sus_scrofa
ENSHGLG00000018430	DDB1	100	96.667	ENSTGUG00000006414	DDB1	100	96.667	Taeniopygia_guttata
ENSHGLG00000018430	DDB1	94	90.121	ENSTRUG00000016682	ddb1	98	90.121	Takifugu_rubripes
ENSHGLG00000018430	DDB1	88	85.030	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSHGLG00000018430	DDB1	94	93.595	ENSTTRG00000011055	DDB1	94	93.995	Tursiops_truncatus
ENSHGLG00000018430	DDB1	94	98.884	ENSUAMG00000017793	DDB1	93	98.884	Ursus_americanus
ENSHGLG00000018430	DDB1	94	98.884	ENSUMAG00000011788	DDB1	98	98.884	Ursus_maritimus
ENSHGLG00000018430	DDB1	90	99.020	ENSVPAG00000007963	DDB1	92	99.020	Vicugna_pacos
ENSHGLG00000018430	DDB1	100	99.035	ENSVVUG00000004987	DDB1	100	99.035	Vulpes_vulpes
ENSHGLG00000018430	DDB1	100	92.920	ENSXETG00000008820	ddb1	100	92.920	Xenopus_tropicalis
ENSHGLG00000018430	DDB1	86	91.122	ENSXCOG00000013956	ddb1	99	91.122	Xiphophorus_couchianus
ENSHGLG00000018430	DDB1	94	91.053	ENSXMAG00000000022	ddb1	99	91.053	Xiphophorus_maculatus