EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000018491 (Gene tree)
Gene ID: -
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 5702 bases
Position: chrJH602047.1:24191979-24197680
Accession: 101701662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000025974	RRM_1	PF00076.22	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000026204	SLIRP-201	1161	XM_004837118	ENSHGLP00000025974	111 (aa)	XP_004837175	UPI00034F2DB1

Gene Model

Click here to download ENSHGLG00000018491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000018491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000018491	SLIRP	83	60.870	ENSG00000119705	SLIRP	100	58.559	Homo_sapiens
ENSHGLG00000018491	SLIRP	64	54.930	ENSAPOG00000001298	slirp	71	54.930	Acanthochromis_polyacanthus
ENSHGLG00000018491	SLIRP	82	67.033	ENSAMEG00000003975	SLIRP	100	67.033	Ailuropoda_melanoleuca
ENSHGLG00000018491	SLIRP	81	47.778	ENSACIG00000023083	slirp	87	47.778	Amphilophus_citrinellus
ENSHGLG00000018491	SLIRP	77	50.000	ENSAOCG00000006342	slirp	86	50.000	Amphiprion_ocellaris
ENSHGLG00000018491	SLIRP	78	51.685	ENSAPEG00000015917	slirp	86	50.000	Amphiprion_percula
ENSHGLG00000018491	SLIRP	78	51.685	ENSAPEG00000015719	-	87	50.000	Amphiprion_percula
ENSHGLG00000018491	SLIRP	80	43.820	ENSATEG00000013525	slirp	89	43.820	Anabas_testudineus
ENSHGLG00000018491	SLIRP	78	52.273	ENSAMXG00000018693	slirp	88	52.273	Astyanax_mexicanus
ENSHGLG00000018491	SLIRP	100	65.766	ENSCJAG00000016946	SLIRP	100	65.766	Callithrix_jacchus
ENSHGLG00000018491	SLIRP	100	67.568	ENSCAFG00020015876	-	100	67.568	Canis_lupus_dingo
ENSHGLG00000018491	SLIRP	100	66.667	ENSCCAG00000030130	SLIRP	100	66.667	Cebus_capucinus
ENSHGLG00000018491	SLIRP	100	62.162	ENSCATG00000036327	SLIRP	100	62.162	Cercocebus_atys
ENSHGLG00000018491	SLIRP	90	62.000	ENSCSAG00000011736	SLIRP	100	63.063	Chlorocebus_sabaeus
ENSHGLG00000018491	SLIRP	74	47.619	ENSCPBG00000026327	SLIRP	85	47.619	Chrysemys_picta_bellii
ENSHGLG00000018491	SLIRP	67	64.865	ENSCANG00000032892	SLIRP	90	64.773	Colobus_angolensis_palliatus
ENSHGLG00000018491	SLIRP	100	59.459	ENSCGRG00001024068	Slirp	100	59.459	Cricetulus_griseus_chok1gshd
ENSHGLG00000018491	SLIRP	100	59.459	ENSCGRG00000017440	Slirp	100	59.459	Cricetulus_griseus_crigri
ENSHGLG00000018491	SLIRP	64	54.930	ENSCSEG00000015766	slirp	72	54.930	Cynoglossus_semilaevis
ENSHGLG00000018491	SLIRP	62	53.623	ENSCVAG00000012504	slirp	68	53.623	Cyprinodon_variegatus
ENSHGLG00000018491	SLIRP	65	51.389	ENSDARG00000097753	slirp	69	52.113	Danio_rerio
ENSHGLG00000018491	SLIRP	83	65.217	ENSDNOG00000007721	SLIRP	100	61.261	Dasypus_novemcinctus
ENSHGLG00000018491	SLIRP	100	69.369	ENSDORG00000012379	Slirp	100	69.369	Dipodomys_ordii
ENSHGLG00000018491	SLIRP	90	61.000	ENSETEG00000010345	SLIRP	100	60.360	Echinops_telfairi
ENSHGLG00000018491	SLIRP	100	72.973	ENSEASG00005020193	SLIRP	100	72.973	Equus_asinus_asinus
ENSHGLG00000018491	SLIRP	83	58.696	ENSEEUG00000007257	SLIRP	90	58.696	Erinaceus_europaeus
ENSHGLG00000018491	SLIRP	77	47.674	ENSELUG00000016800	slirp	84	47.674	Esox_lucius
ENSHGLG00000018491	SLIRP	79	72.727	ENSFCAG00000036326	SLIRP	90	72.727	Felis_catus
ENSHGLG00000018491	SLIRP	64	47.887	ENSFALG00000012583	SLIRP	69	47.945	Ficedula_albicollis
ENSHGLG00000018491	SLIRP	97	76.106	ENSFDAG00000008347	SLIRP	100	76.106	Fukomys_damarensis
ENSHGLG00000018491	SLIRP	53	54.237	ENSFHEG00000004709	slirp	64	54.237	Fundulus_heteroclitus
ENSHGLG00000018491	SLIRP	64	53.521	ENSGMOG00000016948	slirp	68	53.521	Gadus_morhua
ENSHGLG00000018491	SLIRP	71	48.148	ENSGALG00000031238	SLIRP	82	48.148	Gallus_gallus
ENSHGLG00000018491	SLIRP	82	46.154	ENSGAFG00000010998	slirp	89	46.154	Gambusia_affinis
ENSHGLG00000018491	SLIRP	64	52.113	ENSGACG00000020137	slirp	83	52.113	Gasterosteus_aculeatus
ENSHGLG00000018491	SLIRP	86	50.515	ENSGAGG00000009953	SLIRP	67	50.515	Gopherus_agassizii
ENSHGLG00000018491	SLIRP	83	59.783	ENSGGOG00000011059	-	100	57.658	Gorilla_gorilla
ENSHGLG00000018491	SLIRP	100	100.000	ENSHGLG00100014153	SLIRP	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000018491	SLIRP	80	47.778	ENSHCOG00000006795	slirp	89	47.778	Hippocampus_comes
ENSHGLG00000018491	SLIRP	64	50.704	ENSIPUG00000010214	SLIRP	71	50.704	Ictalurus_punctatus
ENSHGLG00000018491	SLIRP	90	74.000	ENSSTOG00000034316	SLIRP	100	73.874	Ictidomys_tridecemlineatus
ENSHGLG00000018491	SLIRP	81	42.391	ENSKMAG00000002038	slirp	88	42.391	Kryptolebias_marmoratus
ENSHGLG00000018491	SLIRP	81	44.444	ENSLBEG00000007564	slirp	88	44.444	Labrus_bergylta
ENSHGLG00000018491	SLIRP	81	46.667	ENSLACG00000013434	SLIRP	86	46.667	Latimeria_chalumnae
ENSHGLG00000018491	SLIRP	90	61.000	ENSMFAG00000042960	SLIRP	100	61.261	Macaca_fascicularis
ENSHGLG00000018491	SLIRP	90	61.000	ENSMMUG00000029256	SLIRP	100	62.162	Macaca_mulatta
ENSHGLG00000018491	SLIRP	90	61.000	ENSMNEG00000028921	SLIRP	100	61.261	Macaca_nemestrina
ENSHGLG00000018491	SLIRP	79	64.773	ENSMLEG00000043644	SLIRP	90	64.773	Mandrillus_leucophaeus
ENSHGLG00000018491	SLIRP	81	50.000	ENSMZEG00005004617	slirp	89	50.000	Maylandia_zebra
ENSHGLG00000018491	SLIRP	100	62.162	ENSMAUG00000003857	Slirp	100	62.162	Mesocricetus_auratus
ENSHGLG00000018491	SLIRP	100	63.063	ENSMICG00000012080	SLIRP	100	63.063	Microcebus_murinus
ENSHGLG00000018491	SLIRP	98	63.303	ENSMOCG00000016019	Slirp	97	63.303	Microtus_ochrogaster
ENSHGLG00000018491	SLIRP	78	47.126	ENSMMOG00000018268	slirp	87	47.126	Mola_mola
ENSHGLG00000018491	SLIRP	63	67.143	ENSMODG00000005207	-	99	67.143	Monodelphis_domestica
ENSHGLG00000018491	SLIRP	80	48.315	ENSMALG00000012581	slirp	89	48.315	Monopterus_albus
ENSHGLG00000018491	SLIRP	97	62.037	MGP_CAROLIEiJ_G0017995	Slirp	100	62.037	Mus_caroli
ENSHGLG00000018491	SLIRP	98	62.385	ENSMUSG00000021040	Slirp	97	62.385	Mus_musculus
ENSHGLG00000018491	SLIRP	98	62.385	MGP_SPRETEiJ_G0018840	Slirp	97	62.385	Mus_spretus
ENSHGLG00000018491	SLIRP	86	70.526	ENSMLUG00000024998	-	100	67.568	Myotis_lucifugus
ENSHGLG00000018491	SLIRP	90	70.000	ENSMLUG00000029544	-	100	68.468	Myotis_lucifugus
ENSHGLG00000018491	SLIRP	97	61.111	ENSNGAG00000016363	Slirp	100	61.111	Nannospalax_galili
ENSHGLG00000018491	SLIRP	93	55.340	ENSNLEG00000027238	-	97	55.340	Nomascus_leucogenys
ENSHGLG00000018491	SLIRP	100	56.757	ENSNLEG00000032459	-	100	56.757	Nomascus_leucogenys
ENSHGLG00000018491	SLIRP	98	68.807	ENSODEG00000012580	SLIRP	97	68.807	Octodon_degus
ENSHGLG00000018491	SLIRP	81	51.111	ENSONIG00000011692	slirp	89	51.111	Oreochromis_niloticus
ENSHGLG00000018491	SLIRP	89	53.271	ENSOANG00000022366	SLIRP	93	53.271	Ornithorhynchus_anatinus
ENSHGLG00000018491	SLIRP	80	48.315	ENSORLG00000010761	slirp	69	48.315	Oryzias_latipes
ENSHGLG00000018491	SLIRP	80	49.438	ENSORLG00020022188	slirp	89	49.438	Oryzias_latipes_hni
ENSHGLG00000018491	SLIRP	99	44.545	ENSORLG00015020171	slirp	100	44.545	Oryzias_latipes_hsok
ENSHGLG00000018491	SLIRP	81	48.889	ENSOMEG00000019321	slirp	88	48.889	Oryzias_melastigma
ENSHGLG00000018491	SLIRP	83	59.783	ENSPPAG00000040710	-	100	57.658	Pan_paniscus
ENSHGLG00000018491	SLIRP	79	72.727	ENSPPRG00000014350	SLIRP	90	72.727	Panthera_pardus
ENSHGLG00000018491	SLIRP	79	72.727	ENSPTIG00000014196	SLIRP	90	72.727	Panthera_tigris_altaica
ENSHGLG00000018491	SLIRP	81	61.111	ENSPTRG00000030691	SLIRP	100	58.716	Pan_troglodytes
ENSHGLG00000018491	SLIRP	100	63.964	ENSPANG00000026323	SLIRP	100	63.964	Papio_anubis
ENSHGLG00000018491	SLIRP	62	47.222	ENSPKIG00000008831	slirp	71	47.222	Paramormyrops_kingsleyae
ENSHGLG00000018491	SLIRP	62	56.522	ENSPMGG00000010541	slirp	79	56.522	Periophthalmus_magnuspinnatus
ENSHGLG00000018491	SLIRP	88	62.626	ENSPEMG00000013234	Slirp	95	62.385	Peromyscus_maniculatus_bairdii
ENSHGLG00000018491	SLIRP	61	51.471	ENSPMAG00000009355	slirp	76	51.471	Petromyzon_marinus
ENSHGLG00000018491	SLIRP	72	62.195	ENSPCIG00000026842	-	88	62.195	Phascolarctos_cinereus
ENSHGLG00000018491	SLIRP	81	45.556	ENSPFOG00000006758	slirp	88	45.556	Poecilia_formosa
ENSHGLG00000018491	SLIRP	81	46.667	ENSPLAG00000011140	slirp	88	46.667	Poecilia_latipinna
ENSHGLG00000018491	SLIRP	81	45.556	ENSPMEG00000019535	slirp	88	45.556	Poecilia_mexicana
ENSHGLG00000018491	SLIRP	64	52.113	ENSPREG00000011673	slirp	71	52.113	Poecilia_reticulata
ENSHGLG00000018491	SLIRP	88	61.224	ENSPPYG00000006030	SLIRP	97	61.468	Pongo_abelii
ENSHGLG00000018491	SLIRP	100	62.162	ENSPCOG00000015159	SLIRP	100	62.162	Propithecus_coquereli
ENSHGLG00000018491	SLIRP	80	53.933	ENSPNAG00000008633	slirp	89	53.933	Pygocentrus_nattereri
ENSHGLG00000018491	SLIRP	88	56.122	ENSRBIG00000035817	-	100	57.798	Rhinopithecus_bieti
ENSHGLG00000018491	SLIRP	69	62.338	ENSRBIG00000032998	-	81	63.636	Rhinopithecus_bieti
ENSHGLG00000018491	SLIRP	90	61.000	ENSRBIG00000032222	-	100	62.162	Rhinopithecus_bieti
ENSHGLG00000018491	SLIRP	68	62.667	ENSRBIG00000031396	-	86	63.953	Rhinopithecus_bieti
ENSHGLG00000018491	SLIRP	83	57.609	ENSRROG00000041312	-	99	59.223	Rhinopithecus_roxellana
ENSHGLG00000018491	SLIRP	90	60.000	ENSRROG00000036656	-	100	61.261	Rhinopithecus_roxellana
ENSHGLG00000018491	SLIRP	69	62.338	ENSRROG00000017133	-	92	63.636	Rhinopithecus_roxellana
ENSHGLG00000018491	SLIRP	68	64.000	ENSRROG00000035604	-	86	65.116	Rhinopithecus_roxellana
ENSHGLG00000018491	SLIRP	79	65.909	ENSSBOG00000020014	SLIRP	95	65.909	Saimiri_boliviensis_boliviensis
ENSHGLG00000018491	SLIRP	74	53.571	ENSSFOG00015011165	slirp	85	53.571	Scleropages_formosus
ENSHGLG00000018491	SLIRP	78	43.678	ENSSMAG00000012930	slirp	85	43.678	Scophthalmus_maximus
ENSHGLG00000018491	SLIRP	80	48.315	ENSSDUG00000021883	slirp	59	48.315	Seriola_dumerili
ENSHGLG00000018491	SLIRP	80	48.315	ENSSLDG00000023136	slirp	81	48.315	Seriola_lalandi_dorsalis
ENSHGLG00000018491	SLIRP	86	44.211	ENSSPUG00000009346	SLIRP	91	44.211	Sphenodon_punctatus
ENSHGLG00000018491	SLIRP	63	52.857	ENSSPAG00000013477	slirp	70	52.857	Stegastes_partitus
ENSHGLG00000018491	SLIRP	100	72.072	ENSSSCG00000028167	SLIRP	100	72.072	Sus_scrofa
ENSHGLG00000018491	SLIRP	64	47.887	ENSTGUG00000012337	SLIRP	69	47.945	Taeniopygia_guttata
ENSHGLG00000018491	SLIRP	80	43.333	ENSTRUG00000020127	slirp	88	43.333	Takifugu_rubripes
ENSHGLG00000018491	SLIRP	100	70.270	ENSUAMG00000022445	SLIRP	100	70.270	Ursus_americanus
ENSHGLG00000018491	SLIRP	100	71.171	ENSUMAG00000007166	SLIRP	100	71.171	Ursus_maritimus
ENSHGLG00000018491	SLIRP	100	69.369	ENSVPAG00000001781	SLIRP	100	69.369	Vicugna_pacos
ENSHGLG00000018491	SLIRP	85	69.149	ENSVVUG00000004436	SLIRP	100	67.568	Vulpes_vulpes
ENSHGLG00000018491	SLIRP	63	52.857	ENSXETG00000030343	SLIRP	79	52.857	Xenopus_tropicalis
ENSHGLG00000018491	SLIRP	81	45.556	ENSXCOG00000009422	slirp	88	45.556	Xiphophorus_couchianus
ENSHGLG00000018491	SLIRP	81	46.667	ENSXMAG00000015655	slirp	88	46.667	Xiphophorus_maculatus