EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000018597 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 2004 bases
Position: chrJH602057.1:33835948-33837951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000026126	SRP72	PF08492.12	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000026358	-	1782	-	ENSHGLP00000026126	593 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000018597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000018597's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000018597	-	97	71.538	ENSHGLG00000005029	-	97	70.878
ENSHGLG00000018597	-	98	59.688	ENSHGLG00000010633	-	98	59.177
ENSHGLG00000018597	-	86	71.304	ENSHGLG00000003950	-	97	71.304
ENSHGLG00000018597	-	97	75.152	ENSHGLG00000009791	SRP72	97	74.809

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000018597	-	97	74.390	ENSG00000174780	SRP72	97	74.046	Homo_sapiens
ENSHGLG00000018597	-	99	52.941	ENSAPOG00000019438	srp72	96	52.558	Acanthochromis_polyacanthus
ENSHGLG00000018597	-	95	74.534	ENSAMEG00000008469	SRP72	97	73.813	Ailuropoda_melanoleuca
ENSHGLG00000018597	-	99	60.811	ENSACIG00000000488	srp72	97	60.247	Amphilophus_citrinellus
ENSHGLG00000018597	-	99	60.030	ENSAOCG00000011256	srp72	97	59.288	Amphiprion_ocellaris
ENSHGLG00000018597	-	99	60.030	ENSAPEG00000001512	srp72	97	59.288	Amphiprion_percula
ENSHGLG00000018597	-	90	60.000	ENSATEG00000006781	srp72	99	59.836	Anabas_testudineus
ENSHGLG00000018597	-	98	65.606	ENSAPLG00000008751	SRP72	96	65.008	Anas_platyrhynchos
ENSHGLG00000018597	-	96	67.233	ENSACAG00000002381	SRP72	97	66.161	Anolis_carolinensis
ENSHGLG00000018597	-	94	72.926	ENSANAG00000020836	-	97	71.768	Aotus_nancymaae
ENSHGLG00000018597	-	99	61.295	ENSACLG00000014617	srp72	97	60.433	Astatotilapia_calliptera
ENSHGLG00000018597	-	97	59.509	ENSAMXG00000004011	srp72	97	59.231	Astyanax_mexicanus
ENSHGLG00000018597	-	97	73.323	ENSBTAG00000010593	SRP72	97	72.977	Bos_taurus
ENSHGLG00000018597	-	97	73.628	ENSCJAG00000017998	SRP72	97	73.282	Callithrix_jacchus
ENSHGLG00000018597	-	97	74.390	ENSCAFG00000002244	SRP72	97	74.046	Canis_familiaris
ENSHGLG00000018597	-	97	74.390	ENSCAFG00020027338	SRP72	95	75.265	Canis_lupus_dingo
ENSHGLG00000018597	-	97	71.277	ENSCHIG00000021465	SRP72	97	70.928	Capra_hircus
ENSHGLG00000018597	-	96	75.077	ENSTSYG00000010571	-	97	74.006	Carlito_syrichta
ENSHGLG00000018597	-	77	66.154	ENSCAPG00000016668	SRP72	96	66.154	Cavia_aperea
ENSHGLG00000018597	-	97	74.695	ENSCPOG00000000218	SRP72	97	74.351	Cavia_porcellus
ENSHGLG00000018597	-	94	73.270	ENSCCAG00000030683	-	95	72.956	Cebus_capucinus
ENSHGLG00000018597	-	97	72.129	ENSCCAG00000030830	-	97	71.779	Cebus_capucinus
ENSHGLG00000018597	-	96	64.734	ENSCATG00000045359	-	95	64.516	Cercocebus_atys
ENSHGLG00000018597	-	97	74.238	ENSCATG00000008072	SRP72	97	73.893	Cercocebus_atys
ENSHGLG00000018597	-	97	74.695	ENSCLAG00000003571	SRP72	97	74.351	Chinchilla_lanigera
ENSHGLG00000018597	-	97	71.603	ENSCSAG00000005079	SRP72	97	71.254	Chlorocebus_sabaeus
ENSHGLG00000018597	-	89	68.067	ENSCHOG00000013240	SRP72	87	68.067	Choloepus_hoffmanni
ENSHGLG00000018597	-	95	67.134	ENSCPBG00000015015	SRP72	97	65.697	Chrysemys_picta_bellii
ENSHGLG00000018597	-	90	34.290	ENSCING00000002417	-	90	35.407	Ciona_intestinalis
ENSHGLG00000018597	-	89	34.790	ENSCSAVG00000011288	-	93	34.783	Ciona_savignyi
ENSHGLG00000018597	-	99	57.393	ENSCANG00000037920	-	97	57.955	Colobus_angolensis_palliatus
ENSHGLG00000018597	-	97	74.238	ENSCANG00000041709	SRP72	97	73.893	Colobus_angolensis_palliatus
ENSHGLG00000018597	-	100	74.256	ENSCGRG00001013548	Srp72	97	73.588	Cricetulus_griseus_chok1gshd
ENSHGLG00000018597	-	95	75.791	ENSCGRG00000003013	Srp72	96	78.409	Cricetulus_griseus_crigri
ENSHGLG00000018597	-	96	60.401	ENSCSEG00000003616	srp72	97	60.587	Cynoglossus_semilaevis
ENSHGLG00000018597	-	89	59.504	ENSCVAG00000001520	srp72	99	59.174	Cyprinodon_variegatus
ENSHGLG00000018597	-	85	60.424	ENSDARG00000014139	srp72	96	60.209	Danio_rerio
ENSHGLG00000018597	-	97	71.494	ENSDNOG00000039012	SRP72	81	70.992	Dasypus_novemcinctus
ENSHGLG00000018597	-	95	74.884	ENSDORG00000000171	Srp72	97	74.351	Dipodomys_ordii
ENSHGLG00000018597	-	89	34.826	FBgn0038810	Srp72	92	34.826	Drosophila_melanogaster
ENSHGLG00000018597	-	97	73.018	ENSETEG00000005191	SRP72	97	72.672	Echinops_telfairi
ENSHGLG00000018597	-	86	43.273	ENSEBUG00000003696	srp72	95	43.297	Eptatretus_burgeri
ENSHGLG00000018597	-	97	74.238	ENSEASG00005017747	SRP72	97	73.893	Equus_asinus_asinus
ENSHGLG00000018597	-	97	74.085	ENSECAG00000006920	SRP72	97	73.740	Equus_caballus
ENSHGLG00000018597	-	99	58.894	ENSELUG00000022415	srp72	95	60.456	Esox_lucius
ENSHGLG00000018597	-	97	73.780	ENSFCAG00000027600	SRP72	97	73.435	Felis_catus
ENSHGLG00000018597	-	95	66.978	ENSFALG00000006713	SRP72	96	66.254	Ficedula_albicollis
ENSHGLG00000018597	-	97	74.771	ENSFDAG00000002014	-	97	74.426	Fukomys_damarensis
ENSHGLG00000018597	-	96	51.466	ENSFDAG00000009793	-	94	51.387	Fukomys_damarensis
ENSHGLG00000018597	-	99	58.929	ENSFHEG00000017652	srp72	90	58.931	Fundulus_heteroclitus
ENSHGLG00000018597	-	95	55.882	ENSGMOG00000005986	srp72	96	56.192	Gadus_morhua
ENSHGLG00000018597	-	95	67.083	ENSGALG00000011403	SRP72	97	66.107	Gallus_gallus
ENSHGLG00000018597	-	99	60.451	ENSGAFG00000017762	srp72	96	59.938	Gambusia_affinis
ENSHGLG00000018597	-	99	58.929	ENSGACG00000016749	srp72	97	58.931	Gasterosteus_aculeatus
ENSHGLG00000018597	-	89	67.121	ENSGAGG00000024611	SRP72	97	66.382	Gopherus_agassizii
ENSHGLG00000018597	-	97	73.933	ENSGGOG00000013234	-	97	73.588	Gorilla_gorilla
ENSHGLG00000018597	-	99	61.295	ENSHBUG00000020723	srp72	97	60.433	Haplochromis_burtoni
ENSHGLG00000018597	-	97	57.903	ENSHGLG00100009346	-	97	58.307	Heterocephalus_glaber_male
ENSHGLG00000018597	-	97	71.538	ENSHGLG00100011236	-	97	70.878	Heterocephalus_glaber_male
ENSHGLG00000018597	-	86	70.870	ENSHGLG00100017133	-	97	70.870	Heterocephalus_glaber_male
ENSHGLG00000018597	-	97	75.152	ENSHGLG00100009021	SRP72	97	74.809	Heterocephalus_glaber_male
ENSHGLG00000018597	-	96	59.414	ENSHCOG00000013760	srp72	97	59.133	Hippocampus_comes
ENSHGLG00000018597	-	99	59.581	ENSIPUG00000000210	srp72	97	58.833	Ictalurus_punctatus
ENSHGLG00000018597	-	97	75.000	ENSSTOG00000007305	SRP72	97	74.656	Ictidomys_tridecemlineatus
ENSHGLG00000018597	-	95	73.292	ENSJJAG00000018324	Srp72	97	72.713	Jaculus_jaculus
ENSHGLG00000018597	-	99	58.647	ENSKMAG00000003776	srp72	97	58.333	Kryptolebias_marmoratus
ENSHGLG00000018597	-	96	60.555	ENSLOCG00000002628	srp72	96	60.433	Lepisosteus_oculatus
ENSHGLG00000018597	-	97	73.780	ENSLAFG00000018307	SRP72	97	73.435	Loxodonta_africana
ENSHGLG00000018597	-	97	74.390	ENSMFAG00000031065	SRP72	97	74.046	Macaca_fascicularis
ENSHGLG00000018597	-	97	65.869	ENSMFAG00000037164	-	97	65.747	Macaca_fascicularis
ENSHGLG00000018597	-	98	74.545	ENSMMUG00000016368	SRP72	97	74.046	Macaca_mulatta
ENSHGLG00000018597	-	94	61.513	ENSMMUG00000021262	-	95	61.258	Macaca_mulatta
ENSHGLG00000018597	-	97	74.390	ENSMNEG00000038065	-	97	74.046	Macaca_nemestrina
ENSHGLG00000018597	-	94	74.921	ENSMLEG00000030140	-	95	74.286	Mandrillus_leucophaeus
ENSHGLG00000018597	-	99	59.463	ENSMAMG00000014989	srp72	86	58.716	Mastacembelus_armatus
ENSHGLG00000018597	-	99	61.295	ENSMZEG00005003325	srp72	97	60.433	Maylandia_zebra
ENSHGLG00000018597	-	93	65.097	ENSMGAG00000008567	SRP72	96	68.293	Meleagris_gallopavo
ENSHGLG00000018597	-	100	74.256	ENSMAUG00000001237	Srp72	97	73.588	Mesocricetus_auratus
ENSHGLG00000018597	-	94	74.286	ENSMICG00000008507	-	95	73.968	Microcebus_murinus
ENSHGLG00000018597	-	100	73.958	ENSMOCG00000020309	Srp72	97	73.282	Microtus_ochrogaster
ENSHGLG00000018597	-	99	58.434	ENSMMOG00000002627	srp72	97	58.423	Mola_mola
ENSHGLG00000018597	-	95	67.601	ENSMODG00000020697	SRP72	97	66.820	Monodelphis_domestica
ENSHGLG00000018597	-	100	60.565	ENSMALG00000003747	srp72	97	60.307	Monopterus_albus
ENSHGLG00000018597	-	100	73.065	MGP_CAROLIEiJ_G0027323	Srp72	97	72.366	Mus_caroli
ENSHGLG00000018597	-	100	73.065	ENSMUSG00000036323	Srp72	97	72.366	Mus_musculus
ENSHGLG00000018597	-	98	73.716	MGP_PahariEiJ_G0017103	Srp72	97	72.561	Mus_pahari
ENSHGLG00000018597	-	100	73.065	MGP_SPRETEiJ_G0028317	Srp72	97	72.366	Mus_spretus
ENSHGLG00000018597	-	95	74.528	ENSMPUG00000004828	SRP72	97	73.507	Mustela_putorius_furo
ENSHGLG00000018597	-	95	73.333	ENSMLUG00000007344	SRP72	97	72.492	Myotis_lucifugus
ENSHGLG00000018597	-	100	73.512	ENSNGAG00000012595	Srp72	97	72.824	Nannospalax_galili
ENSHGLG00000018597	-	99	59.237	ENSNBRG00000014492	srp72	97	58.255	Neolamprologus_brichardi
ENSHGLG00000018597	-	97	69.008	ENSNLEG00000008806	-	97	68.702	Nomascus_leucogenys
ENSHGLG00000018597	-	87	74.737	ENSMEUG00000005164	SRP72	87	75.556	Notamacropus_eugenii
ENSHGLG00000018597	-	95	72.317	ENSOPRG00000012521	SRP72	97	71.908	Ochotona_princeps
ENSHGLG00000018597	-	95	75.000	ENSODEG00000012214	SRP72	97	74.264	Octodon_degus
ENSHGLG00000018597	-	99	61.103	ENSONIG00000001446	srp72	97	60.245	Oreochromis_niloticus
ENSHGLG00000018597	-	96	57.496	ENSOANG00000008562	SRP72	97	57.447	Ornithorhynchus_anatinus
ENSHGLG00000018597	-	97	73.933	ENSOCUG00000012226	SRP72	97	73.740	Oryctolagus_cuniculus
ENSHGLG00000018597	-	99	58.673	ENSORLG00000020418	srp72	96	58.230	Oryzias_latipes
ENSHGLG00000018597	-	99	58.220	ENSORLG00020009138	srp72	95	57.143	Oryzias_latipes_hni
ENSHGLG00000018597	-	99	58.069	ENSORLG00015018251	srp72	96	57.609	Oryzias_latipes_hsok
ENSHGLG00000018597	-	99	58.220	ENSOMEG00000022008	srp72	97	57.740	Oryzias_melastigma
ENSHGLG00000018597	-	97	73.933	ENSOGAG00000003578	SRP72	97	73.588	Otolemur_garnettii
ENSHGLG00000018597	-	97	73.476	ENSOARG00000004329	SRP72	97	73.130	Ovis_aries
ENSHGLG00000018597	-	97	74.390	ENSPPAG00000042265	SRP72	97	77.320	Pan_paniscus
ENSHGLG00000018597	-	98	55.573	ENSPPAG00000011428	-	95	55.850	Pan_paniscus
ENSHGLG00000018597	-	80	62.715	ENSPPAG00000032490	-	91	63.188	Pan_paniscus
ENSHGLG00000018597	-	95	74.068	ENSPPRG00000015991	SRP72	97	73.354	Panthera_pardus
ENSHGLG00000018597	-	95	74.068	ENSPTIG00000018786	SRP72	97	73.354	Panthera_tigris_altaica
ENSHGLG00000018597	-	98	58.075	ENSPTRG00000048100	-	95	58.425	Pan_troglodytes
ENSHGLG00000018597	-	80	62.715	ENSPTRG00000043609	-	92	62.799	Pan_troglodytes
ENSHGLG00000018597	-	97	74.390	ENSPTRG00000048466	-	97	74.046	Pan_troglodytes
ENSHGLG00000018597	-	97	74.238	ENSPANG00000005495	SRP72	97	73.893	Papio_anubis
ENSHGLG00000018597	-	94	64.648	ENSPANG00000030230	-	97	64.039	Papio_anubis
ENSHGLG00000018597	-	93	68.882	ENSPSIG00000003003	SRP72	96	68.506	Pelodiscus_sinensis
ENSHGLG00000018597	-	98	74.091	ENSPEMG00000012828	-	97	73.059	Peromyscus_maniculatus_bairdii
ENSHGLG00000018597	-	96	70.124	ENSPCIG00000000732	SRP72	97	69.149	Phascolarctos_cinereus
ENSHGLG00000018597	-	99	60.451	ENSPFOG00000003480	srp72	96	59.938	Poecilia_formosa
ENSHGLG00000018597	-	99	60.451	ENSPLAG00000020122	srp72	96	59.938	Poecilia_latipinna
ENSHGLG00000018597	-	99	60.150	ENSPMEG00000019988	srp72	96	59.627	Poecilia_mexicana
ENSHGLG00000018597	-	99	60.451	ENSPREG00000006218	srp72	96	59.938	Poecilia_reticulata
ENSHGLG00000018597	-	97	74.238	ENSPPYG00000014752	-	76	73.893	Pongo_abelii
ENSHGLG00000018597	-	55	63.684	ENSPPYG00000009152	-	95	63.325	Pongo_abelii
ENSHGLG00000018597	-	97	72.256	ENSPVAG00000005590	SRP72	97	71.908	Pteropus_vampyrus
ENSHGLG00000018597	-	99	61.295	ENSPNYG00000001916	srp72	97	60.433	Pundamilia_nyererei
ENSHGLG00000018597	-	99	59.820	ENSPNAG00000022424	srp72	97	59.077	Pygocentrus_nattereri
ENSHGLG00000018597	-	100	72.578	ENSRNOG00000002100	LOC108348180	97	72.477	Rattus_norvegicus
ENSHGLG00000018597	-	98	62.124	ENSRBIG00000029328	-	96	61.789	Rhinopithecus_bieti
ENSHGLG00000018597	-	97	70.827	ENSRBIG00000042069	SRP72	97	70.938	Rhinopithecus_bieti
ENSHGLG00000018597	-	97	74.238	ENSRROG00000035704	SRP72	97	73.893	Rhinopithecus_roxellana
ENSHGLG00000018597	-	93	71.753	ENSSHAG00000000614	SRP72	91	71.382	Sarcophilus_harrisii
ENSHGLG00000018597	-	99	61.295	ENSSFOG00015002026	srp72	97	60.587	Scleropages_formosus
ENSHGLG00000018597	-	99	58.021	ENSSMAG00000007639	srp72	97	58.000	Scophthalmus_maximus
ENSHGLG00000018597	-	99	59.613	ENSSDUG00000007345	srp72	96	59.571	Seriola_dumerili
ENSHGLG00000018597	-	99	59.762	ENSSLDG00000021819	srp72	97	59.351	Seriola_lalandi_dorsalis
ENSHGLG00000018597	-	72	68.947	ENSSARG00000005804	SRP72	74	68.865	Sorex_araneus
ENSHGLG00000018597	-	95	66.927	ENSSPUG00000009740	SRP72	97	65.496	Sphenodon_punctatus
ENSHGLG00000018597	-	99	59.639	ENSSPAG00000011565	srp72	97	59.660	Stegastes_partitus
ENSHGLG00000018597	-	100	72.523	ENSSSCG00000008900	SRP72	97	72.111	Sus_scrofa
ENSHGLG00000018597	-	95	66.874	ENSTGUG00000004767	SRP72	95	66.511	Taeniopygia_guttata
ENSHGLG00000018597	-	97	59.299	ENSTRUG00000009831	srp72	96	60.526	Takifugu_rubripes
ENSHGLG00000018597	-	99	61.295	ENSTNIG00000013073	srp72	96	60.896	Tetraodon_nigroviridis
ENSHGLG00000018597	-	72	66.316	ENSTBEG00000007394	SRP72	64	80.000	Tupaia_belangeri
ENSHGLG00000018597	-	93	75.649	ENSTTRG00000010945	SRP72	97	75.285	Tursiops_truncatus
ENSHGLG00000018597	-	56	72.396	ENSUAMG00000001701	SRP72	95	72.632	Ursus_americanus
ENSHGLG00000018597	-	95	74.224	ENSUMAG00000008151	SRP72	97	73.507	Ursus_maritimus
ENSHGLG00000018597	-	97	72.755	ENSVPAG00000000458	SRP72	97	72.409	Vicugna_pacos
ENSHGLG00000018597	-	97	74.238	ENSVVUG00000006020	SRP72	97	73.893	Vulpes_vulpes
ENSHGLG00000018597	-	95	62.776	ENSXETG00000010205	srp72	97	61.951	Xenopus_tropicalis
ENSHGLG00000018597	-	99	59.821	ENSXMAG00000018000	srp72	97	59.784	Xiphophorus_maculatus