EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000018620 (Gene tree)
Gene ID: -
Gene Symbol: PCBP3
Alias: FLJ44028|PCBP3-OT1|PCBP3OT
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 66867 bases
Position: chrJH602058.1:31037384-31104250
Accession: 101707912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000026166	KH_1	PF00013.29	1.5e-55	1	3
ENSHGLP00000026166	KH_1	PF00013.29	1.5e-55	2	3
ENSHGLP00000026166	KH_1	PF00013.29	1.5e-55	3	3
ENSHGLP00000026167	KH_1	PF00013.29	4.6e-49	1	3
ENSHGLP00000026167	KH_1	PF00013.29	4.6e-49	2	3
ENSHGLP00000026167	KH_1	PF00013.29	4.6e-49	3	3
ENSHGLP00000026166	KH_2	PF07650.17	2.1e-15	1	1
ENSHGLP00000026167	KH_2	PF07650.17	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000026399	PCBP3-202	1065	-	ENSHGLP00000026167	354 (aa)	-	-
ENSHGLT00000026398	PCBP3-201	1113	XM_004842522	ENSHGLP00000026166	370 (aa)	XP_004842579	-

Gene Model

Click here to download ENSHGLG00000018620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000018620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000018620	PCBP3	84	40.351	ENSHGLG00000003180	NOVA1	59	40.351
ENSHGLG00000018620	PCBP3	91	68.564	ENSHGLG00000019854	-	99	68.564
ENSHGLG00000018620	PCBP3	68	52.857	ENSHGLG00000017317	-	59	52.857
ENSHGLG00000018620	PCBP3	67	32.653	ENSHGLG00000008415	-	50	40.625
ENSHGLG00000018620	PCBP3	91	65.934	ENSHGLG00000020243	-	99	65.934
ENSHGLG00000018620	PCBP3	89	60.000	ENSHGLG00000012018	PCBP4	76	60.000
ENSHGLG00000018620	PCBP3	66	32.143	ENSHGLG00000002808	-	56	32.143
ENSHGLG00000018620	PCBP3	91	78.107	ENSHGLG00000001776	PCBP2	99	78.107
ENSHGLG00000018620	PCBP3	94	36.296	ENSHGLG00000016529	IGF2BP2	77	36.296
ENSHGLG00000018620	PCBP3	91	68.843	ENSHGLG00000017847	-	97	68.843
ENSHGLG00000018620	PCBP3	91	62.385	ENSHGLG00000006371	-	95	64.832
ENSHGLG00000018620	PCBP3	86	33.577	ENSHGLG00000013075	IGF2BP3	59	33.577
ENSHGLG00000018620	PCBP3	70	50.000	ENSHGLG00000003913	-	52	52.857
ENSHGLG00000018620	PCBP3	65	50.000	ENSHGLG00000009920	-	57	50.000
ENSHGLG00000018620	PCBP3	97	30.952	ENSHGLG00000014381	-	72	30.952
ENSHGLG00000018620	PCBP3	77	30.189	ENSHGLG00000013239	KHSRP	53	35.938
ENSHGLG00000018620	PCBP3	91	66.484	ENSHGLG00000020345	Pcbp1	99	66.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000018620	PCBP3	99	97.554	ENSG00000183570	PCBP3	99	97.554	Homo_sapiens
ENSHGLG00000018620	PCBP3	91	71.720	ENSAPOG00000023735	zgc:110045	99	71.720	Acanthochromis_polyacanthus
ENSHGLG00000018620	PCBP3	91	69.207	ENSACIG00000002577	zgc:110045	96	75.610	Amphilophus_citrinellus
ENSHGLG00000018620	PCBP3	73	72.906	ENSAOCG00000005266	zgc:110045	97	72.906	Amphiprion_ocellaris
ENSHGLG00000018620	PCBP3	89	72.072	ENSAPEG00000000729	zgc:110045	72	72.072	Amphiprion_percula
ENSHGLG00000018620	PCBP3	86	66.939	ENSATEG00000011191	zgc:110045	65	66.939	Anabas_testudineus
ENSHGLG00000018620	PCBP3	89	72.673	ENSACLG00000019285	zgc:110045	72	72.673	Astatotilapia_calliptera
ENSHGLG00000018620	PCBP3	99	92.120	ENSBTAG00000030775	PCBP3	100	92.818	Bos_taurus
ENSHGLG00000018620	PCBP3	99	97.011	ENSCAFG00000011907	PCBP3	99	97.011	Canis_familiaris
ENSHGLG00000018620	PCBP3	99	97.143	ENSCHIG00000015841	PCBP3	98	95.368	Capra_hircus
ENSHGLG00000018620	PCBP3	80	86.266	ENSTSYG00000005254	PCBP3	94	86.266	Carlito_syrichta
ENSHGLG00000018620	PCBP3	100	78.592	ENSCAPG00000006767	PCBP3	92	77.089	Cavia_aperea
ENSHGLG00000018620	PCBP3	99	97.283	ENSCPOG00000003648	PCBP3	99	97.283	Cavia_porcellus
ENSHGLG00000018620	PCBP3	99	96.739	ENSCCAG00000024561	PCBP3	99	96.739	Cebus_capucinus
ENSHGLG00000018620	PCBP3	99	97.283	ENSCATG00000038419	PCBP3	100	96.694	Cercocebus_atys
ENSHGLG00000018620	PCBP3	99	98.098	ENSCLAG00000006667	PCBP3	99	98.098	Chinchilla_lanigera
ENSHGLG00000018620	PCBP3	99	97.011	ENSCANG00000026757	PCBP3	99	97.011	Colobus_angolensis_palliatus
ENSHGLG00000018620	PCBP3	99	97.554	ENSCGRG00001006836	Pcbp3	99	97.554	Cricetulus_griseus_chok1gshd
ENSHGLG00000018620	PCBP3	99	97.554	ENSCGRG00000001837	Pcbp3	99	97.554	Cricetulus_griseus_crigri
ENSHGLG00000018620	PCBP3	91	71.137	ENSCSEG00000010020	zgc:110045	99	71.137	Cynoglossus_semilaevis
ENSHGLG00000018620	PCBP3	71	75.773	ENSCVAG00000004726	zgc:110045	89	75.773	Cyprinodon_variegatus
ENSHGLG00000018620	PCBP3	72	77.778	ENSDARG00000057141	zgc:110045	94	77.778	Danio_rerio
ENSHGLG00000018620	PCBP3	99	94.278	ENSDNOG00000049518	PCBP3	100	94.278	Dasypus_novemcinctus
ENSHGLG00000018620	PCBP3	83	82.857	ENSDORG00000003640	Pcbp3	99	82.927	Dipodomys_ordii
ENSHGLG00000018620	PCBP3	84	73.109	ENSEBUG00000009697	zgc:110045	99	76.382	Eptatretus_burgeri
ENSHGLG00000018620	PCBP3	99	92.120	ENSEASG00005007068	PCBP3	99	92.120	Equus_asinus_asinus
ENSHGLG00000018620	PCBP3	99	92.120	ENSECAG00000012413	PCBP3	99	92.120	Equus_caballus
ENSHGLG00000018620	PCBP3	89	71.045	ENSELUG00000019784	zgc:110045	72	71.045	Esox_lucius
ENSHGLG00000018620	PCBP3	99	96.739	ENSFCAG00000014812	PCBP3	99	96.739	Felis_catus
ENSHGLG00000018620	PCBP3	99	97.554	ENSFDAG00000009117	PCBP3	99	97.554	Fukomys_damarensis
ENSHGLG00000018620	PCBP3	91	66.374	ENSFHEG00000018838	-	92	74.129	Fundulus_heteroclitus
ENSHGLG00000018620	PCBP3	90	68.876	ENSGMOG00000005953	zgc:110045	98	68.876	Gadus_morhua
ENSHGLG00000018620	PCBP3	71	79.126	ENSGAFG00000017864	zgc:110045	91	79.126	Gambusia_affinis
ENSHGLG00000018620	PCBP3	91	71.512	ENSGACG00000003044	zgc:110045	99	71.512	Gasterosteus_aculeatus
ENSHGLG00000018620	PCBP3	99	97.283	ENSGGOG00000003683	PCBP3	99	97.283	Gorilla_gorilla
ENSHGLG00000018620	PCBP3	91	72.303	ENSHBUG00000012495	zgc:110045	99	72.303	Haplochromis_burtoni
ENSHGLG00000018620	PCBP3	100	100.000	ENSHGLG00100013590	PCBP3	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000018620	PCBP3	83	73.206	ENSHCOG00000000818	zgc:110045	96	73.684	Hippocampus_comes
ENSHGLG00000018620	PCBP3	72	75.362	ENSIPUG00000003932	zgc:110045	77	75.362	Ictalurus_punctatus
ENSHGLG00000018620	PCBP3	99	97.011	ENSSTOG00000007178	PCBP3	99	97.011	Ictidomys_tridecemlineatus
ENSHGLG00000018620	PCBP3	99	97.011	ENSJJAG00000021192	Pcbp3	99	97.011	Jaculus_jaculus
ENSHGLG00000018620	PCBP3	68	80.952	ENSKMAG00000016179	-	90	80.952	Kryptolebias_marmoratus
ENSHGLG00000018620	PCBP3	91	70.262	ENSLBEG00000023074	zgc:110045	99	70.262	Labrus_bergylta
ENSHGLG00000018620	PCBP3	92	97.345	ENSLAFG00000020835	PCBP3	100	97.345	Loxodonta_africana
ENSHGLG00000018620	PCBP3	99	97.283	ENSMFAG00000034574	PCBP3	99	97.283	Macaca_fascicularis
ENSHGLG00000018620	PCBP3	99	97.283	ENSMMUG00000003825	PCBP3	99	97.283	Macaca_mulatta
ENSHGLG00000018620	PCBP3	99	97.283	ENSMNEG00000035551	PCBP3	99	97.283	Macaca_nemestrina
ENSHGLG00000018620	PCBP3	99	97.283	ENSMLEG00000038785	PCBP3	99	97.283	Mandrillus_leucophaeus
ENSHGLG00000018620	PCBP3	91	69.277	ENSMAMG00000014389	zgc:110045	99	71.988	Mastacembelus_armatus
ENSHGLG00000018620	PCBP3	89	72.673	ENSMZEG00005011785	zgc:110045	72	72.673	Maylandia_zebra
ENSHGLG00000018620	PCBP3	99	97.011	ENSMAUG00000007036	Pcbp3	99	97.011	Mesocricetus_auratus
ENSHGLG00000018620	PCBP3	99	96.196	ENSMICG00000012679	PCBP3	99	96.196	Microcebus_murinus
ENSHGLG00000018620	PCBP3	99	97.283	ENSMOCG00000016127	Pcbp3	99	97.283	Microtus_ochrogaster
ENSHGLG00000018620	PCBP3	67	82.759	ENSMMOG00000008399	zgc:110045	85	82.759	Mola_mola
ENSHGLG00000018620	PCBP3	70	78.378	ENSMALG00000008763	zgc:110045	92	78.378	Monopterus_albus
ENSHGLG00000018620	PCBP3	99	97.283	MGP_CAROLIEiJ_G0015475	Pcbp3	99	97.283	Mus_caroli
ENSHGLG00000018620	PCBP3	99	97.011	ENSMUSG00000001120	Pcbp3	99	97.011	Mus_musculus
ENSHGLG00000018620	PCBP3	99	97.283	MGP_PahariEiJ_G0030889	Pcbp3	99	97.283	Mus_pahari
ENSHGLG00000018620	PCBP3	99	97.283	MGP_SPRETEiJ_G0016288	Pcbp3	99	97.283	Mus_spretus
ENSHGLG00000018620	PCBP3	99	92.663	ENSMLUG00000003074	PCBP3	99	92.663	Myotis_lucifugus
ENSHGLG00000018620	PCBP3	99	97.011	ENSNGAG00000005416	Pcbp3	99	97.011	Nannospalax_galili
ENSHGLG00000018620	PCBP3	89	72.673	ENSNBRG00000017646	zgc:110045	72	72.673	Neolamprologus_brichardi
ENSHGLG00000018620	PCBP3	99	97.826	ENSNLEG00000002639	PCBP3	99	97.826	Nomascus_leucogenys
ENSHGLG00000018620	PCBP3	92	87.569	ENSMEUG00000012960	PCBP3	100	87.569	Notamacropus_eugenii
ENSHGLG00000018620	PCBP3	99	97.443	ENSODEG00000012873	PCBP3	99	95.924	Octodon_degus
ENSHGLG00000018620	PCBP3	89	72.673	ENSONIG00000010370	zgc:110045	76	72.673	Oreochromis_niloticus
ENSHGLG00000018620	PCBP3	85	90.545	ENSOANG00000006265	PCBP3	97	90.545	Ornithorhynchus_anatinus
ENSHGLG00000018620	PCBP3	89	72.072	ENSORLG00000014385	-	72	72.072	Oryzias_latipes
ENSHGLG00000018620	PCBP3	89	71.772	ENSORLG00020003139	zgc:110045	86	75.122	Oryzias_latipes_hni
ENSHGLG00000018620	PCBP3	89	71.772	ENSOMEG00000015459	-	72	71.772	Oryzias_melastigma
ENSHGLG00000018620	PCBP3	99	91.057	ENSOARG00000012704	PCBP3	99	91.057	Ovis_aries
ENSHGLG00000018620	PCBP3	99	97.283	ENSPPAG00000021940	PCBP3	99	97.283	Pan_paniscus
ENSHGLG00000018620	PCBP3	99	96.739	ENSPPRG00000003933	PCBP3	99	96.739	Panthera_pardus
ENSHGLG00000018620	PCBP3	100	81.513	ENSPTIG00000012038	PCBP3	99	83.379	Panthera_tigris_altaica
ENSHGLG00000018620	PCBP3	99	75.068	ENSPTRG00000014010	PCBP3	99	75.068	Pan_troglodytes
ENSHGLG00000018620	PCBP3	99	97.283	ENSPANG00000023631	PCBP3	99	97.283	Papio_anubis
ENSHGLG00000018620	PCBP3	78	76.410	ENSPMGG00000022531	-	92	76.410	Periophthalmus_magnuspinnatus
ENSHGLG00000018620	PCBP3	90	61.290	ENSPMGG00000021588	-	72	61.404	Periophthalmus_magnuspinnatus
ENSHGLG00000018620	PCBP3	99	97.554	ENSPEMG00000000587	Pcbp3	99	97.554	Peromyscus_maniculatus_bairdii
ENSHGLG00000018620	PCBP3	90	71.598	ENSPFOG00000002348	zgc:110045	98	71.598	Poecilia_formosa
ENSHGLG00000018620	PCBP3	74	75.610	ENSPLAG00000017488	zgc:110045	93	75.610	Poecilia_latipinna
ENSHGLG00000018620	PCBP3	88	70.948	ENSPMEG00000012762	zgc:110045	91	79.126	Poecilia_mexicana
ENSHGLG00000018620	PCBP3	87	72.866	ENSPREG00000001797	zgc:110045	94	77.358	Poecilia_reticulata
ENSHGLG00000018620	PCBP3	82	97.266	ENSPPYG00000011525	-	94	97.266	Pongo_abelii
ENSHGLG00000018620	PCBP3	91	73.143	ENSPCAG00000001454	PCBP3	100	75.714	Procavia_capensis
ENSHGLG00000018620	PCBP3	99	96.467	ENSPCOG00000013797	PCBP3	99	96.467	Propithecus_coquereli
ENSHGLG00000018620	PCBP3	82	89.565	ENSPVAG00000000832	PCBP3	83	89.565	Pteropus_vampyrus
ENSHGLG00000018620	PCBP3	74	76.098	ENSPNYG00000004637	zgc:110045	96	76.098	Pundamilia_nyererei
ENSHGLG00000018620	PCBP3	75	78.673	ENSPNAG00000004501	zgc:110045	94	78.673	Pygocentrus_nattereri
ENSHGLG00000018620	PCBP3	99	97.283	ENSRROG00000034567	PCBP3	99	97.283	Rhinopithecus_roxellana
ENSHGLG00000018620	PCBP3	99	96.467	ENSSBOG00000005789	PCBP3	99	96.467	Saimiri_boliviensis_boliviensis
ENSHGLG00000018620	PCBP3	89	72.072	ENSSMAG00000013541	zgc:110045	91	76.389	Scophthalmus_maximus
ENSHGLG00000018620	PCBP3	81	69.355	ENSSDUG00000019371	zgc:110045	66	69.355	Seriola_dumerili
ENSHGLG00000018620	PCBP3	89	72.372	ENSSLDG00000021064	zgc:110045	72	72.372	Seriola_lalandi_dorsalis
ENSHGLG00000018620	PCBP3	81	74.627	ENSSARG00000007629	-	100	74.752	Sorex_araneus
ENSHGLG00000018620	PCBP3	91	72.012	ENSSPAG00000000563	zgc:110045	99	72.012	Stegastes_partitus
ENSHGLG00000018620	PCBP3	99	92.120	ENSSSCG00000023041	PCBP3	99	92.120	Sus_scrofa
ENSHGLG00000018620	PCBP3	67	83.333	ENSTRUG00000017789	zgc:110045	92	83.333	Takifugu_rubripes
ENSHGLG00000018620	PCBP3	71	81.503	ENSTNIG00000003546	zgc:110045	85	81.503	Tetraodon_nigroviridis
ENSHGLG00000018620	PCBP3	64	77.253	ENSTBEG00000011882	-	73	77.253	Tupaia_belangeri
ENSHGLG00000018620	PCBP3	100	95.763	ENSUAMG00000006491	PCBP3	99	94.550	Ursus_americanus
ENSHGLG00000018620	PCBP3	100	86.034	ENSUMAG00000025403	PCBP3	99	85.175	Ursus_maritimus
ENSHGLG00000018620	PCBP3	99	89.674	ENSVVUG00000023862	PCBP3	100	85.714	Vulpes_vulpes
ENSHGLG00000018620	PCBP3	62	82.692	ENSXCOG00000005968	zgc:110045	82	82.692	Xiphophorus_couchianus
ENSHGLG00000018620	PCBP3	87	72.561	ENSXMAG00000008030	zgc:110045	71	72.561	Xiphophorus_maculatus