EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000018811 (Gene tree)
Gene ID: -
Gene Symbol: PSPC1
Alias: FLJ10955|PSP1
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 72036 bases
Position: chrJH602089.1:17906063-17978098
Accession: 101714198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000026438	RRM_1	PF00076.22	2.7e-32	1	2
ENSHGLP00000026438	RRM_1	PF00076.22	2.7e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000026674	-	3084	XM_004854893	ENSHGLP00000026438	520 (aa)	XP_004854950	A0A0P6J6E5

Gene Model

Click here to download ENSHGLG00000018811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000018811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000018811	PSPC1	92	58.714	ENSHGLG00000005550	NONO	80	67.368
ENSHGLG00000018811	PSPC1	90	57.173	ENSHGLG00000012001	SFPQ	55	65.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000018811	PSPC1	100	96.941	ENSG00000121390	PSPC1	100	96.941	Homo_sapiens
ENSHGLG00000018811	PSPC1	89	70.860	ENSAPOG00000015946	pspc1	87	69.409	Acanthochromis_polyacanthus
ENSHGLG00000018811	PSPC1	100	97.505	ENSAMEG00000017420	PSPC1	100	97.505	Ailuropoda_melanoleuca
ENSHGLG00000018811	PSPC1	99	57.037	ENSACIG00000018695	pspc1	100	54.630	Amphilophus_citrinellus
ENSHGLG00000018811	PSPC1	89	69.937	ENSAOCG00000005279	pspc1	87	68.987	Amphiprion_ocellaris
ENSHGLG00000018811	PSPC1	89	70.378	ENSAPEG00000015927	pspc1	79	73.488	Amphiprion_percula
ENSHGLG00000018811	PSPC1	89	58.174	ENSATEG00000004878	pspc1	96	55.725	Anabas_testudineus
ENSHGLG00000018811	PSPC1	89	60.730	ENSAPLG00000003643	SFPQ	69	69.126	Anas_platyrhynchos
ENSHGLG00000018811	PSPC1	78	92.822	ENSAPLG00000006246	PSPC1	100	92.822	Anas_platyrhynchos
ENSHGLG00000018811	PSPC1	89	91.416	ENSACAG00000002093	PSPC1	99	84.499	Anolis_carolinensis
ENSHGLG00000018811	PSPC1	90	52.292	ENSACAG00000013307	-	56	64.917	Anolis_carolinensis
ENSHGLG00000018811	PSPC1	100	97.313	ENSANAG00000000059	PSPC1	100	97.313	Aotus_nancymaae
ENSHGLG00000018811	PSPC1	99	57.649	ENSACLG00000027220	pspc1	100	54.833	Astatotilapia_calliptera
ENSHGLG00000018811	PSPC1	99	64.457	ENSAMXG00000036881	pspc1	92	66.667	Astyanax_mexicanus
ENSHGLG00000018811	PSPC1	100	95.785	ENSBTAG00000003934	PSPC1	100	95.785	Bos_taurus
ENSHGLG00000018811	PSPC1	100	97.313	ENSCJAG00000004554	PSPC1	100	97.313	Callithrix_jacchus
ENSHGLG00000018811	PSPC1	100	97.505	ENSCAFG00020002009	PSPC1	100	97.505	Canis_lupus_dingo
ENSHGLG00000018811	PSPC1	100	95.785	ENSCHIG00000016708	PSPC1	100	95.785	Capra_hircus
ENSHGLG00000018811	PSPC1	77	91.542	ENSTSYG00000032882	PSPC1	93	85.273	Carlito_syrichta
ENSHGLG00000018811	PSPC1	100	98.846	ENSCPOG00000000395	PSPC1	100	98.846	Cavia_porcellus
ENSHGLG00000018811	PSPC1	100	97.313	ENSCCAG00000033498	PSPC1	100	97.313	Cebus_capucinus
ENSHGLG00000018811	PSPC1	100	96.558	ENSCATG00000036434	PSPC1	100	96.558	Cercocebus_atys
ENSHGLG00000018811	PSPC1	89	88.553	ENSCLAG00000005241	PSPC1	99	88.553	Chinchilla_lanigera
ENSHGLG00000018811	PSPC1	100	89.484	ENSCHOG00000008913	PSPC1	100	89.866	Choloepus_hoffmanni
ENSHGLG00000018811	PSPC1	99	86.882	ENSCPBG00000020859	PSPC1	99	86.882	Chrysemys_picta_bellii
ENSHGLG00000018811	PSPC1	59	58.766	ENSCSAVG00000003533	-	58	57.655	Ciona_savignyi
ENSHGLG00000018811	PSPC1	78	85.185	ENSCANG00000018948	PSPC1	87	100.000	Colobus_angolensis_palliatus
ENSHGLG00000018811	PSPC1	100	95.602	ENSCGRG00001018368	Pspc1	100	95.602	Cricetulus_griseus_chok1gshd
ENSHGLG00000018811	PSPC1	100	95.602	ENSCGRG00000011724	Pspc1	100	95.602	Cricetulus_griseus_crigri
ENSHGLG00000018811	PSPC1	88	66.307	ENSCVAG00000007679	-	91	63.340	Cyprinodon_variegatus
ENSHGLG00000018811	PSPC1	99	66.417	ENSDARG00000006621	pspc1	100	67.150	Danio_rerio
ENSHGLG00000018811	PSPC1	100	94.837	ENSDNOG00000011078	PSPC1	100	95.411	Dasypus_novemcinctus
ENSHGLG00000018811	PSPC1	100	93.499	ENSDORG00000016050	Pspc1	100	93.499	Dipodomys_ordii
ENSHGLG00000018811	PSPC1	55	100.000	ENSETEG00000000502	-	72	100.000	Echinops_telfairi
ENSHGLG00000018811	PSPC1	60	45.536	ENSEBUG00000010133	pspc1	77	49.495	Eptatretus_burgeri
ENSHGLG00000018811	PSPC1	88	59.091	ENSEBUG00000003964	-	62	72.464	Eptatretus_burgeri
ENSHGLG00000018811	PSPC1	100	96.737	ENSEASG00005000119	PSPC1	100	96.737	Equus_asinus_asinus
ENSHGLG00000018811	PSPC1	100	96.737	ENSECAG00000017286	PSPC1	100	96.737	Equus_caballus
ENSHGLG00000018811	PSPC1	73	86.885	ENSEEUG00000011288	-	88	83.386	Erinaceus_europaeus
ENSHGLG00000018811	PSPC1	89	71.069	ENSELUG00000003746	pspc1	78	82.154	Esox_lucius
ENSHGLG00000018811	PSPC1	100	97.889	ENSFCAG00000027841	PSPC1	100	97.889	Felis_catus
ENSHGLG00000018811	PSPC1	90	94.004	ENSFALG00000008750	PSPC1	99	87.146	Ficedula_albicollis
ENSHGLG00000018811	PSPC1	100	97.692	ENSFDAG00000002617	PSPC1	100	97.692	Fukomys_damarensis
ENSHGLG00000018811	PSPC1	88	66.595	ENSGMOG00000015074	pspc1	91	63.508	Gadus_morhua
ENSHGLG00000018811	PSPC1	99	86.907	ENSGALG00000017142	PSPC1	99	86.907	Gallus_gallus
ENSHGLG00000018811	PSPC1	62	78.154	ENSGAFG00000006327	pspc1	67	78.154	Gambusia_affinis
ENSHGLG00000018811	PSPC1	88	65.733	ENSGACG00000014901	pspc1	92	73.414	Gasterosteus_aculeatus
ENSHGLG00000018811	PSPC1	89	60.086	ENSGAGG00000017325	-	56	68.306	Gopherus_agassizii
ENSHGLG00000018811	PSPC1	99	86.692	ENSGAGG00000019164	PSPC1	99	86.692	Gopherus_agassizii
ENSHGLG00000018811	PSPC1	100	97.132	ENSGGOG00000003414	PSPC1	100	97.132	Gorilla_gorilla
ENSHGLG00000018811	PSPC1	99	64.804	ENSHBUG00000001139	pspc1	100	64.432	Haplochromis_burtoni
ENSHGLG00000018811	PSPC1	67	94.236	ENSHGLG00100007962	PSPC1	100	94.236	Heterocephalus_glaber_male
ENSHGLG00000018811	PSPC1	73	70.757	ENSHCOG00000013251	pspc1	93	66.351	Hippocampus_comes
ENSHGLG00000018811	PSPC1	99	67.528	ENSIPUG00000013192	pspc1	92	70.791	Ictalurus_punctatus
ENSHGLG00000018811	PSPC1	100	96.941	ENSSTOG00000026833	PSPC1	100	96.941	Ictidomys_tridecemlineatus
ENSHGLG00000018811	PSPC1	100	96.367	ENSJJAG00000018334	Pspc1	100	96.367	Jaculus_jaculus
ENSHGLG00000018811	PSPC1	89	55.508	ENSKMAG00000013525	-	96	51.638	Kryptolebias_marmoratus
ENSHGLG00000018811	PSPC1	93	65.606	ENSLBEG00000004474	pspc1	79	70.413	Labrus_bergylta
ENSHGLG00000018811	PSPC1	99	78.286	ENSLACG00000010762	PSPC1	99	77.674	Latimeria_chalumnae
ENSHGLG00000018811	PSPC1	99	78.035	ENSLOCG00000010832	pspc1	99	77.842	Lepisosteus_oculatus
ENSHGLG00000018811	PSPC1	100	95.602	ENSLAFG00000010968	PSPC1	100	96.367	Loxodonta_africana
ENSHGLG00000018811	PSPC1	100	96.558	ENSMFAG00000032728	PSPC1	100	96.558	Macaca_fascicularis
ENSHGLG00000018811	PSPC1	100	96.558	ENSMMUG00000020262	PSPC1	100	96.558	Macaca_mulatta
ENSHGLG00000018811	PSPC1	100	96.558	ENSMNEG00000027401	PSPC1	100	96.558	Macaca_nemestrina
ENSHGLG00000018811	PSPC1	100	98.246	ENSMLEG00000039043	PSPC1	100	98.246	Mandrillus_leucophaeus
ENSHGLG00000018811	PSPC1	91	66.532	ENSMAMG00000004333	pspc1	89	62.083	Mastacembelus_armatus
ENSHGLG00000018811	PSPC1	99	57.649	ENSMZEG00005005726	pspc1	100	54.833	Maylandia_zebra
ENSHGLG00000018811	PSPC1	78	92.611	ENSMGAG00000015134	PSPC1	100	92.611	Meleagris_gallopavo
ENSHGLG00000018811	PSPC1	88	90.909	ENSMAUG00000021067	Pspc1	99	90.909	Mesocricetus_auratus
ENSHGLG00000018811	PSPC1	100	96.367	ENSMICG00000013970	PSPC1	99	97.403	Microcebus_murinus
ENSHGLG00000018811	PSPC1	100	94.847	ENSMOCG00000006060	Pspc1	100	95.802	Microtus_ochrogaster
ENSHGLG00000018811	PSPC1	94	42.803	ENSMMOG00000004352	pspc1	64	50.418	Mola_mola
ENSHGLG00000018811	PSPC1	93	95.876	ENSMODG00000008029	PSPC1	78	95.876	Monodelphis_domestica
ENSHGLG00000018811	PSPC1	89	69.313	ENSMALG00000008914	pspc1	88	67.653	Monopterus_albus
ENSHGLG00000018811	PSPC1	100	94.656	MGP_CAROLIEiJ_G0019341	Pspc1	100	95.611	Mus_caroli
ENSHGLG00000018811	PSPC1	100	95.802	ENSMUSG00000021938	Pspc1	100	95.802	Mus_musculus
ENSHGLG00000018811	PSPC1	100	94.656	MGP_PahariEiJ_G0030359	Pspc1	100	95.611	Mus_pahari
ENSHGLG00000018811	PSPC1	100	94.656	MGP_SPRETEiJ_G0020232	Pspc1	100	95.611	Mus_spretus
ENSHGLG00000018811	PSPC1	100	97.889	ENSMPUG00000013347	PSPC1	100	97.889	Mustela_putorius_furo
ENSHGLG00000018811	PSPC1	100	95.992	ENSMLUG00000017663	PSPC1	100	95.992	Myotis_lucifugus
ENSHGLG00000018811	PSPC1	100	96.176	ENSNGAG00000011271	Pspc1	100	96.176	Nannospalax_galili
ENSHGLG00000018811	PSPC1	73	65.385	ENSNBRG00000014059	pspc1	92	62.437	Neolamprologus_brichardi
ENSHGLG00000018811	PSPC1	100	96.750	ENSNLEG00000001294	PSPC1	100	96.750	Nomascus_leucogenys
ENSHGLG00000018811	PSPC1	100	74.952	ENSMEUG00000000476	PSPC1	100	74.952	Notamacropus_eugenii
ENSHGLG00000018811	PSPC1	100	87.140	ENSODEG00000019012	-	100	88.676	Octodon_degus
ENSHGLG00000018811	PSPC1	100	87.885	ENSODEG00000007817	-	100	84.030	Octodon_degus
ENSHGLG00000018811	PSPC1	99	64.804	ENSONIG00000012010	pspc1	99	63.720	Oreochromis_niloticus
ENSHGLG00000018811	PSPC1	99	66.027	ENSOANG00000011381	-	99	65.643	Ornithorhynchus_anatinus
ENSHGLG00000018811	PSPC1	77	96.742	ENSOANG00000009017	-	100	96.742	Ornithorhynchus_anatinus
ENSHGLG00000018811	PSPC1	100	96.750	ENSOCUG00000006153	PSPC1	100	96.750	Oryctolagus_cuniculus
ENSHGLG00000018811	PSPC1	89	69.787	ENSORLG00000004232	-	92	64.386	Oryzias_latipes
ENSHGLG00000018811	PSPC1	89	68.511	ENSORLG00020000578	PSPC1	92	64.386	Oryzias_latipes_hni
ENSHGLG00000018811	PSPC1	89	70.213	ENSORLG00015017480	pspc1	92	64.990	Oryzias_latipes_hsok
ENSHGLG00000018811	PSPC1	100	97.132	ENSOGAG00000012643	PSPC1	100	97.132	Otolemur_garnettii
ENSHGLG00000018811	PSPC1	100	90.996	ENSOARG00000014163	PSPC1	100	90.996	Ovis_aries
ENSHGLG00000018811	PSPC1	90	91.631	ENSPPAG00000009836	PSPC1	98	95.690	Pan_paniscus
ENSHGLG00000018811	PSPC1	100	97.889	ENSPPRG00000008833	PSPC1	100	97.889	Panthera_pardus
ENSHGLG00000018811	PSPC1	100	82.692	ENSPTIG00000016917	PSPC1	100	82.692	Panthera_tigris_altaica
ENSHGLG00000018811	PSPC1	98	95.525	ENSPTRG00000005677	PSPC1	99	97.119	Pan_troglodytes
ENSHGLG00000018811	PSPC1	100	96.750	ENSPANG00000001992	PSPC1	100	96.750	Papio_anubis
ENSHGLG00000018811	PSPC1	93	72.165	ENSPKIG00000003578	pspc1	88	73.561	Paramormyrops_kingsleyae
ENSHGLG00000018811	PSPC1	99	86.252	ENSPSIG00000005168	PSPC1	99	86.742	Pelodiscus_sinensis
ENSHGLG00000018811	PSPC1	59	70.382	ENSPMGG00000015135	pspc1	86	70.288	Periophthalmus_magnuspinnatus
ENSHGLG00000018811	PSPC1	100	95.985	ENSPEMG00000015214	Pspc1	100	95.985	Peromyscus_maniculatus_bairdii
ENSHGLG00000018811	PSPC1	99	95.785	ENSPCIG00000017680	PSPC1	100	95.785	Phascolarctos_cinereus
ENSHGLG00000018811	PSPC1	89	69.002	ENSPFOG00000003362	pspc1	88	68.288	Poecilia_formosa
ENSHGLG00000018811	PSPC1	89	69.002	ENSPLAG00000011540	pspc1	99	63.519	Poecilia_latipinna
ENSHGLG00000018811	PSPC1	68	64.903	ENSPLAG00000004407	-	52	60.377	Poecilia_latipinna
ENSHGLG00000018811	PSPC1	89	68.577	ENSPMEG00000008322	pspc1	99	63.148	Poecilia_mexicana
ENSHGLG00000018811	PSPC1	69	65.000	ENSPMEG00000001025	-	51	60.484	Poecilia_mexicana
ENSHGLG00000018811	PSPC1	89	69.002	ENSPREG00000007786	pspc1	99	63.148	Poecilia_reticulata
ENSHGLG00000018811	PSPC1	100	96.750	ENSPPYG00000005186	PSPC1	100	96.750	Pongo_abelii
ENSHGLG00000018811	PSPC1	66	100.000	ENSPCAG00000008314	-	66	100.000	Procavia_capensis
ENSHGLG00000018811	PSPC1	100	91.396	ENSPCOG00000014364	PSPC1	100	92.543	Propithecus_coquereli
ENSHGLG00000018811	PSPC1	100	92.308	ENSPVAG00000005036	PSPC1	100	94.626	Pteropus_vampyrus
ENSHGLG00000018811	PSPC1	99	57.836	ENSPNYG00000008893	pspc1	100	55.019	Pundamilia_nyererei
ENSHGLG00000018811	PSPC1	99	67.978	ENSPNAG00000016511	pspc1	97	68.153	Pygocentrus_nattereri
ENSHGLG00000018811	PSPC1	100	94.837	ENSRNOG00000020782	Pspc1	100	95.793	Rattus_norvegicus
ENSHGLG00000018811	PSPC1	94	97.536	ENSRBIG00000036057	PSPC1	100	97.536	Rhinopithecus_bieti
ENSHGLG00000018811	PSPC1	100	96.941	ENSRROG00000036334	PSPC1	100	96.941	Rhinopithecus_roxellana
ENSHGLG00000018811	PSPC1	79	87.651	ENSSBOG00000028172	PSPC1	90	95.290	Saimiri_boliviensis_boliviensis
ENSHGLG00000018811	PSPC1	100	89.143	ENSSHAG00000004696	PSPC1	100	90.476	Sarcophilus_harrisii
ENSHGLG00000018811	PSPC1	82	78.605	ENSSFOG00015001395	pspc1	90	78.372	Scleropages_formosus
ENSHGLG00000018811	PSPC1	95	62.928	ENSSMAG00000001761	pspc1	86	74.928	Scophthalmus_maximus
ENSHGLG00000018811	PSPC1	89	68.966	ENSSDUG00000010651	pspc1	92	66.214	Seriola_dumerili
ENSHGLG00000018811	PSPC1	88	64.502	ENSSLDG00000004284	pspc1	85	60.754	Seriola_lalandi_dorsalis
ENSHGLG00000018811	PSPC1	100	87.692	ENSSARG00000000888	PSPC1	100	89.251	Sorex_araneus
ENSHGLG00000018811	PSPC1	89	53.571	ENSSPUG00000001136	-	53	61.625	Sphenodon_punctatus
ENSHGLG00000018811	PSPC1	99	74.621	ENSSPUG00000008550	PSPC1	99	75.283	Sphenodon_punctatus
ENSHGLG00000018811	PSPC1	89	69.072	ENSSPAG00000001921	pspc1	85	69.002	Stegastes_partitus
ENSHGLG00000018811	PSPC1	100	96.929	ENSSSCG00000009569	PSPC1	100	96.929	Sus_scrofa
ENSHGLG00000018811	PSPC1	90	94.004	ENSTGUG00000011295	PSPC1	100	94.004	Taeniopygia_guttata
ENSHGLG00000018811	PSPC1	89	63.270	ENSTRUG00000011335	pspc1	77	66.180	Takifugu_rubripes
ENSHGLG00000018811	PSPC1	89	65.236	ENSTNIG00000010358	pspc1	90	64.626	Tetraodon_nigroviridis
ENSHGLG00000018811	PSPC1	100	75.816	ENSTBEG00000002361	PSPC1	100	75.526	Tupaia_belangeri
ENSHGLG00000018811	PSPC1	100	96.737	ENSTTRG00000003343	PSPC1	100	96.737	Tursiops_truncatus
ENSHGLG00000018811	PSPC1	67	97.994	ENSUAMG00000012309	PSPC1	100	97.994	Ursus_americanus
ENSHGLG00000018811	PSPC1	94	97.536	ENSUMAG00000013993	PSPC1	100	97.536	Ursus_maritimus
ENSHGLG00000018811	PSPC1	77	97.995	ENSVPAG00000010029	PSPC1	100	97.995	Vicugna_pacos
ENSHGLG00000018811	PSPC1	100	97.505	ENSVVUG00000006414	PSPC1	100	98.177	Vulpes_vulpes
ENSHGLG00000018811	PSPC1	67	73.184	ENSXCOG00000017438	pspc1	85	73.184	Xiphophorus_couchianus
ENSHGLG00000018811	PSPC1	67	73.464	ENSXMAG00000007929	pspc1	85	73.464	Xiphophorus_maculatus