EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000019054 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 38674 bases
Position: chrJH602141.1:1769990-1808663
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	1	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	2	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	3	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	4	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	5	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	6	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	7	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	8	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	9	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	10	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	11	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	12	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	13	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	14	15
ENSHGLP00000026792	zf-C2H2	PF00096.26	1.5e-86	15	15
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	1	10
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	2	10
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	3	10
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	4	10
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	5	10
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	6	10
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	7	10
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	8	10
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	9	10
ENSHGLP00000026791	zf-C2H2	PF00096.26	1.5e-60	10	10
ENSHGLP00000026792	zf-met	PF12874.7	2.3e-09	1	1
ENSHGLP00000026791	zf-met	PF12874.7	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000027030	-	2055	-	ENSHGLP00000026792	684 (aa)	-	-
ENSHGLT00000027029	-	2561	-	ENSHGLP00000026791	346 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000019054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000019054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000019054	-	92	58.681	ENSHGLG00000018394	-	94	58.681
ENSHGLG00000019054	-	97	67.203	ENSHGLG00000005362	-	77	67.203
ENSHGLG00000019054	-	91	34.967	ENSHGLG00000002054	ZNF526	81	34.796
ENSHGLG00000019054	-	90	46.429	ENSHGLG00000009439	SNAI2	52	43.284
ENSHGLG00000019054	-	97	54.651	ENSHGLG00000003657	ZNF235	75	54.651
ENSHGLG00000019054	-	98	57.014	ENSHGLG00000018048	ZNF550	88	57.014
ENSHGLG00000019054	-	90	47.368	ENSHGLG00000021435	ZNF646	81	34.021
ENSHGLG00000019054	-	90	45.578	ENSHGLG00000008020	GFI1	55	44.643
ENSHGLG00000019054	-	97	37.349	ENSHGLG00000018743	-	90	37.349
ENSHGLG00000019054	-	94	43.165	ENSHGLG00000007477	ZNF200	50	46.154
ENSHGLG00000019054	-	95	50.540	ENSHGLG00000003200	ZNF226	83	50.540
ENSHGLG00000019054	-	98	48.592	ENSHGLG00000008584	ZNF667	91	40.192
ENSHGLG00000019054	-	90	49.754	ENSHGLG00000015628	ZNF628	58	49.754
ENSHGLG00000019054	-	97	39.100	ENSHGLG00000011504	ZNF319	92	37.339
ENSHGLG00000019054	-	95	32.778	ENSHGLG00000007674	ZNF423	94	32.432
ENSHGLG00000019054	-	97	55.426	ENSHGLG00000005975	-	78	53.641
ENSHGLG00000019054	-	92	38.671	ENSHGLG00000003903	ZNF574	94	38.806
ENSHGLG00000019054	-	90	54.237	ENSHGLG00000012086	ZNF784	68	54.237
ENSHGLG00000019054	-	94	58.824	ENSHGLG00000014609	-	71	58.824
ENSHGLG00000019054	-	99	50.725	ENSHGLG00000001150	-	82	50.725
ENSHGLG00000019054	-	97	56.195	ENSHGLG00000005282	ZNF2	82	54.580
ENSHGLG00000019054	-	89	54.286	ENSHGLG00000010373	ZNF768	51	53.873
ENSHGLG00000019054	-	91	33.516	ENSHGLG00000011024	-	81	33.516
ENSHGLG00000019054	-	90	49.123	ENSHGLG00000003010	PRDM5	84	39.051
ENSHGLG00000019054	-	90	55.556	ENSHGLG00000016406	-	83	55.556
ENSHGLG00000019054	-	90	46.552	ENSHGLG00000004253	WT1	53	44.037
ENSHGLG00000019054	-	97	57.895	ENSHGLG00000014546	-	77	57.895
ENSHGLG00000019054	-	94	47.727	ENSHGLG00000008901	ZFP64	73	47.727
ENSHGLG00000019054	-	90	45.714	ENSHGLG00000005310	SNAI1	51	45.714
ENSHGLG00000019054	-	99	50.633	ENSHGLG00000000648	ZNF236	77	50.633
ENSHGLG00000019054	-	97	54.064	ENSHGLG00000000969	ZNF81	72	48.124
ENSHGLG00000019054	-	89	38.866	ENSHGLG00000004173	GTF3A	93	39.024
ENSHGLG00000019054	-	90	54.839	ENSHGLG00000009291	-	85	53.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000019054	-	100	95.389	ENSCPOG00000033345	-	100	95.389	Cavia_porcellus
ENSHGLG00000019054	-	99	88.696	ENSCGRG00001023858	Zfp560	89	79.080	Cricetulus_griseus_chok1gshd
ENSHGLG00000019054	-	99	88.696	ENSCGRG00000012088	Zfp560	89	79.080	Cricetulus_griseus_crigri
ENSHGLG00000019054	-	100	97.110	ENSFDAG00000008687	-	100	97.110	Fukomys_damarensis
ENSHGLG00000019054	-	100	100.000	ENSHGLG00100015134	-	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000019054	-	100	90.173	ENSSTOG00000033893	-	100	83.333	Ictidomys_tridecemlineatus
ENSHGLG00000019054	-	100	85.838	ENSMOCG00000007908	Zfp560	84	85.838	Microtus_ochrogaster
ENSHGLG00000019054	-	100	89.884	ENSNGAG00000015897	Zfp560	83	89.884	Nannospalax_galili
ENSHGLG00000019054	-	100	93.642	ENSODEG00000017047	-	100	93.642	Octodon_degus
ENSHGLG00000019054	-	97	86.076	ENSOCUG00000029594	-	99	82.290	Oryctolagus_cuniculus
ENSHGLG00000019054	-	90	62.302	ENSOGAG00000025131	ZNF121	100	62.302	Otolemur_garnettii
ENSHGLG00000019054	-	100	85.838	ENSRNOG00000048394	Zfp560	100	77.554	Rattus_norvegicus