EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000019445 (Gene tree)
Gene ID: -
Gene Symbol: SKIV2L2
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 96658 bases
Position: chrJH602072.1:3868662-3965319
Accession: 101724541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000027348	rRNA_proc-arch	PF13234.6	4.1e-87	1	1
ENSHGLP00000027348	DEAD	PF00270.29	4.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000027590	-	3540	XM_004848514	ENSHGLP00000027348	1040 (aa)	XP_004848571	G5C6W9

Gene Model

Click here to download ENSHGLG00000019445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000019445's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000019445	SKIV2L2	88	36.739	ENSHGLG00000016596	SKIV2L	76	36.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000019445	SKIV2L2	100	97.985	ENSG00000039123	MTREX	100	97.985	Homo_sapiens
ENSHGLG00000019445	SKIV2L2	100	83.048	ENSAPOG00000007814	mtrex	100	83.365	Acanthochromis_polyacanthus
ENSHGLG00000019445	SKIV2L2	100	97.603	ENSAMEG00000013856	MTREX	100	97.603	Ailuropoda_melanoleuca
ENSHGLG00000019445	SKIV2L2	92	87.670	ENSACIG00000015117	mtrex	96	87.670	Amphilophus_citrinellus
ENSHGLG00000019445	SKIV2L2	100	83.302	ENSAOCG00000011884	mtrex	100	83.302	Amphiprion_ocellaris
ENSHGLG00000019445	SKIV2L2	100	83.206	ENSAPEG00000019384	mtrex	100	83.206	Amphiprion_percula
ENSHGLG00000019445	SKIV2L2	100	83.699	ENSATEG00000015117	mtrex	100	83.636	Anabas_testudineus
ENSHGLG00000019445	SKIV2L2	95	93.293	ENSAPLG00000009694	MTREX	99	93.293	Anas_platyrhynchos
ENSHGLG00000019445	SKIV2L2	100	91.154	ENSACAG00000015200	MTREX	96	90.805	Anolis_carolinensis
ENSHGLG00000019445	SKIV2L2	100	98.081	ENSANAG00000023095	MTREX	100	98.081	Aotus_nancymaae
ENSHGLG00000019445	SKIV2L2	100	82.600	ENSACLG00000001921	mtrex	100	82.555	Astatotilapia_calliptera
ENSHGLG00000019445	SKIV2L2	95	83.400	ENSAMXG00000018751	mtrex	99	83.333	Astyanax_mexicanus
ENSHGLG00000019445	SKIV2L2	100	97.981	ENSBTAG00000010518	MTREX	100	97.981	Bos_taurus
ENSHGLG00000019445	SKIV2L2	91	53.628	WBGene00012342	mtr-4	96	52.520	Caenorhabditis_elegans
ENSHGLG00000019445	SKIV2L2	100	96.947	ENSCJAG00000001773	MTREX	100	96.947	Callithrix_jacchus
ENSHGLG00000019445	SKIV2L2	100	97.601	ENSCAFG00000006818	MTREX	100	97.601	Canis_familiaris
ENSHGLG00000019445	SKIV2L2	100	97.601	ENSCAFG00020024352	MTREX	100	97.601	Canis_lupus_dingo
ENSHGLG00000019445	SKIV2L2	100	97.697	ENSCHIG00000024413	MTREX	100	97.697	Capra_hircus
ENSHGLG00000019445	SKIV2L2	94	97.846	ENSTSYG00000007389	MTREX	100	97.846	Carlito_syrichta
ENSHGLG00000019445	SKIV2L2	96	74.048	ENSCAPG00000008696	MTREX	100	74.048	Cavia_aperea
ENSHGLG00000019445	SKIV2L2	100	98.177	ENSCPOG00000009797	MTREX	100	98.177	Cavia_porcellus
ENSHGLG00000019445	SKIV2L2	100	97.985	ENSCCAG00000014177	MTREX	100	97.985	Cebus_capucinus
ENSHGLG00000019445	SKIV2L2	100	97.985	ENSCATG00000042153	MTREX	100	97.985	Cercocebus_atys
ENSHGLG00000019445	SKIV2L2	100	98.177	ENSCLAG00000006622	MTREX	100	98.177	Chinchilla_lanigera
ENSHGLG00000019445	SKIV2L2	100	93.206	ENSCSAG00000016445	MTREX	100	93.301	Chlorocebus_sabaeus
ENSHGLG00000019445	SKIV2L2	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSHGLG00000019445	SKIV2L2	100	92.315	ENSCPBG00000026551	MTREX	94	92.315	Chrysemys_picta_bellii
ENSHGLG00000019445	SKIV2L2	99	66.508	ENSCING00000003239	-	99	66.221	Ciona_intestinalis
ENSHGLG00000019445	SKIV2L2	99	65.491	ENSCSAVG00000009304	-	100	70.000	Ciona_savignyi
ENSHGLG00000019445	SKIV2L2	100	97.985	ENSCANG00000035770	MTREX	100	97.985	Colobus_angolensis_palliatus
ENSHGLG00000019445	SKIV2L2	100	96.929	ENSCGRG00001024680	Mtrex	100	96.929	Cricetulus_griseus_chok1gshd
ENSHGLG00000019445	SKIV2L2	100	96.929	ENSCGRG00000000307	Mtrex	100	96.929	Cricetulus_griseus_crigri
ENSHGLG00000019445	SKIV2L2	100	81.818	ENSCSEG00000018621	mtrex	98	81.818	Cynoglossus_semilaevis
ENSHGLG00000019445	SKIV2L2	100	83.828	ENSCVAG00000004556	mtrex	100	83.828	Cyprinodon_variegatus
ENSHGLG00000019445	SKIV2L2	100	84.593	ENSDARG00000013457	mtrex	100	84.498	Danio_rerio
ENSHGLG00000019445	SKIV2L2	100	96.272	ENSDNOG00000015375	MTREX	100	96.176	Dasypus_novemcinctus
ENSHGLG00000019445	SKIV2L2	100	97.313	ENSDORG00000006782	Mtrex	100	97.313	Dipodomys_ordii
ENSHGLG00000019445	SKIV2L2	99	62.500	FBgn0001986	Mtr4	99	62.689	Drosophila_melanogaster
ENSHGLG00000019445	SKIV2L2	90	80.552	ENSETEG00000000727	MTREX	90	80.552	Echinops_telfairi
ENSHGLG00000019445	SKIV2L2	99	74.470	ENSEBUG00000012869	mtrex	99	74.209	Eptatretus_burgeri
ENSHGLG00000019445	SKIV2L2	100	97.217	ENSEASG00005013270	MTREX	100	97.217	Equus_asinus_asinus
ENSHGLG00000019445	SKIV2L2	100	97.313	ENSECAG00000023723	MTREX	100	99.074	Equus_caballus
ENSHGLG00000019445	SKIV2L2	98	88.195	ENSEEUG00000000527	MTREX	100	88.195	Erinaceus_europaeus
ENSHGLG00000019445	SKIV2L2	98	84.399	ENSELUG00000004898	mtrex	100	89.391	Esox_lucius
ENSHGLG00000019445	SKIV2L2	100	97.409	ENSFCAG00000010575	MTREX	100	97.409	Felis_catus
ENSHGLG00000019445	SKIV2L2	100	90.288	ENSFALG00000010850	MTREX	100	90.288	Ficedula_albicollis
ENSHGLG00000019445	SKIV2L2	100	97.981	ENSFDAG00000011199	MTREX	100	97.981	Fukomys_damarensis
ENSHGLG00000019445	SKIV2L2	100	83.413	ENSFHEG00000023014	mtrex	100	82.775	Fundulus_heteroclitus
ENSHGLG00000019445	SKIV2L2	100	79.924	ENSGMOG00000014702	mtrex	100	79.734	Gadus_morhua
ENSHGLG00000019445	SKIV2L2	100	90.962	ENSGALG00000014709	MTREX	86	90.962	Gallus_gallus
ENSHGLG00000019445	SKIV2L2	100	83.714	ENSGAFG00000012425	mtrex	98	87.190	Gambusia_affinis
ENSHGLG00000019445	SKIV2L2	100	79.522	ENSGACG00000016260	mtrex	96	85.326	Gasterosteus_aculeatus
ENSHGLG00000019445	SKIV2L2	100	91.931	ENSGAGG00000020036	MTREX	100	91.643	Gopherus_agassizii
ENSHGLG00000019445	SKIV2L2	100	98.081	ENSGGOG00000001867	MTREX	100	98.081	Gorilla_gorilla
ENSHGLG00000019445	SKIV2L2	100	82.600	ENSHBUG00000006229	mtrex	100	82.555	Haplochromis_burtoni
ENSHGLG00000019445	SKIV2L2	100	100.000	ENSHGLG00100011833	SKIV2L2	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000019445	SKIV2L2	91	84.521	ENSHCOG00000019995	mtrex	100	84.521	Hippocampus_comes
ENSHGLG00000019445	SKIV2L2	100	85.057	ENSIPUG00000024348	skiv2l2	100	85.057	Ictalurus_punctatus
ENSHGLG00000019445	SKIV2L2	100	98.081	ENSSTOG00000010802	MTREX	100	98.081	Ictidomys_tridecemlineatus
ENSHGLG00000019445	SKIV2L2	100	91.250	ENSJJAG00000020975	Mtrex	100	91.250	Jaculus_jaculus
ENSHGLG00000019445	SKIV2L2	100	82.713	ENSKMAG00000012642	mtrex	100	82.713	Kryptolebias_marmoratus
ENSHGLG00000019445	SKIV2L2	100	83.270	ENSLBEG00000019367	mtrex	99	85.877	Labrus_bergylta
ENSHGLG00000019445	SKIV2L2	100	88.100	ENSLACG00000009075	MTREX	100	88.100	Latimeria_chalumnae
ENSHGLG00000019445	SKIV2L2	100	87.044	ENSLOCG00000010186	mtrex	100	86.852	Lepisosteus_oculatus
ENSHGLG00000019445	SKIV2L2	99	95.298	ENSLAFG00000010497	MTREX	100	95.298	Loxodonta_africana
ENSHGLG00000019445	SKIV2L2	100	97.985	ENSMFAG00000031610	MTREX	100	97.985	Macaca_fascicularis
ENSHGLG00000019445	SKIV2L2	100	96.839	ENSMMUG00000010379	MTREX	100	96.839	Macaca_mulatta
ENSHGLG00000019445	SKIV2L2	100	97.985	ENSMNEG00000032746	MTREX	100	97.985	Macaca_nemestrina
ENSHGLG00000019445	SKIV2L2	100	97.985	ENSMLEG00000041051	MTREX	100	97.985	Mandrillus_leucophaeus
ENSHGLG00000019445	SKIV2L2	100	82.584	ENSMAMG00000016753	mtrex	98	85.972	Mastacembelus_armatus
ENSHGLG00000019445	SKIV2L2	100	82.600	ENSMZEG00005000414	mtrex	100	82.555	Maylandia_zebra
ENSHGLG00000019445	SKIV2L2	95	67.308	ENSMGAG00000003980	MTREX	99	67.308	Meleagris_gallopavo
ENSHGLG00000019445	SKIV2L2	100	96.734	ENSMAUG00000010727	Mtrex	100	96.734	Mesocricetus_auratus
ENSHGLG00000019445	SKIV2L2	100	98.273	ENSMICG00000012779	MTREX	100	98.273	Microcebus_murinus
ENSHGLG00000019445	SKIV2L2	100	96.641	ENSMOCG00000019886	Mtrex	100	96.641	Microtus_ochrogaster
ENSHGLG00000019445	SKIV2L2	100	81.836	ENSMMOG00000002476	mtrex	100	81.836	Mola_mola
ENSHGLG00000019445	SKIV2L2	100	92.885	ENSMODG00000019494	MTREX	100	92.885	Monodelphis_domestica
ENSHGLG00000019445	SKIV2L2	92	82.395	ENSMALG00000002917	mtrex	99	82.395	Monopterus_albus
ENSHGLG00000019445	SKIV2L2	100	96.635	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.635	Mus_caroli
ENSHGLG00000019445	SKIV2L2	100	96.827	ENSMUSG00000016018	Mtrex	100	96.827	Mus_musculus
ENSHGLG00000019445	SKIV2L2	100	96.731	MGP_PahariEiJ_G0015967	Mtrex	100	96.731	Mus_pahari
ENSHGLG00000019445	SKIV2L2	100	96.827	MGP_SPRETEiJ_G0019775	Mtrex	100	96.827	Mus_spretus
ENSHGLG00000019445	SKIV2L2	100	97.889	ENSMPUG00000007619	MTREX	100	97.889	Mustela_putorius_furo
ENSHGLG00000019445	SKIV2L2	100	96.740	ENSMLUG00000001152	MTREX	100	96.740	Myotis_lucifugus
ENSHGLG00000019445	SKIV2L2	100	97.505	ENSNGAG00000011938	Mtrex	100	97.505	Nannospalax_galili
ENSHGLG00000019445	SKIV2L2	100	82.696	ENSNBRG00000011293	mtrex	100	82.650	Neolamprologus_brichardi
ENSHGLG00000019445	SKIV2L2	100	93.774	ENSNLEG00000001494	MTREX	100	93.870	Nomascus_leucogenys
ENSHGLG00000019445	SKIV2L2	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSHGLG00000019445	SKIV2L2	100	82.692	ENSOPRG00000008009	MTREX	100	82.692	Ochotona_princeps
ENSHGLG00000019445	SKIV2L2	100	97.601	ENSODEG00000017234	MTREX	100	97.601	Octodon_degus
ENSHGLG00000019445	SKIV2L2	100	82.505	ENSONIG00000007587	mtrex	100	82.459	Oreochromis_niloticus
ENSHGLG00000019445	SKIV2L2	100	98.173	ENSOCUG00000004463	MTREX	100	98.173	Oryctolagus_cuniculus
ENSHGLG00000019445	SKIV2L2	100	82.330	ENSORLG00000005443	mtrex	100	82.330	Oryzias_latipes
ENSHGLG00000019445	SKIV2L2	100	82.235	ENSORLG00020006329	mtrex	100	82.235	Oryzias_latipes_hni
ENSHGLG00000019445	SKIV2L2	100	82.330	ENSORLG00015012924	mtrex	100	82.330	Oryzias_latipes_hsok
ENSHGLG00000019445	SKIV2L2	100	81.559	ENSOMEG00000008825	mtrex	100	81.679	Oryzias_melastigma
ENSHGLG00000019445	SKIV2L2	100	97.697	ENSOGAG00000002886	MTREX	100	97.697	Otolemur_garnettii
ENSHGLG00000019445	SKIV2L2	100	97.416	ENSOARG00000007764	MTREX	100	97.416	Ovis_aries
ENSHGLG00000019445	SKIV2L2	100	98.177	ENSPPAG00000039291	MTREX	100	98.177	Pan_paniscus
ENSHGLG00000019445	SKIV2L2	100	97.409	ENSPPRG00000019701	MTREX	100	97.409	Panthera_pardus
ENSHGLG00000019445	SKIV2L2	100	95.873	ENSPTIG00000009313	MTREX	100	95.873	Panthera_tigris_altaica
ENSHGLG00000019445	SKIV2L2	100	98.177	ENSPTRG00000016878	MTREX	100	98.177	Pan_troglodytes
ENSHGLG00000019445	SKIV2L2	100	97.889	ENSPANG00000009697	MTREX	100	97.889	Papio_anubis
ENSHGLG00000019445	SKIV2L2	100	86.699	ENSPKIG00000020833	mtrex	100	86.890	Paramormyrops_kingsleyae
ENSHGLG00000019445	SKIV2L2	100	92.123	ENSPSIG00000012150	MTREX	100	92.123	Pelodiscus_sinensis
ENSHGLG00000019445	SKIV2L2	100	80.993	ENSPMGG00000002582	mtrex	100	81.280	Periophthalmus_magnuspinnatus
ENSHGLG00000019445	SKIV2L2	95	65.528	ENSPMAG00000009668	mtrex	100	65.427	Petromyzon_marinus
ENSHGLG00000019445	SKIV2L2	91	96.621	ENSPCIG00000024730	MTREX	100	96.621	Phascolarctos_cinereus
ENSHGLG00000019445	SKIV2L2	75	87.199	ENSPFOG00000003141	mtrex	100	87.437	Poecilia_formosa
ENSHGLG00000019445	SKIV2L2	100	83.732	ENSPLAG00000021311	mtrex	100	83.828	Poecilia_latipinna
ENSHGLG00000019445	SKIV2L2	92	87.408	ENSPMEG00000010597	mtrex	99	87.723	Poecilia_mexicana
ENSHGLG00000019445	SKIV2L2	100	83.413	ENSPREG00000003089	mtrex	100	83.732	Poecilia_reticulata
ENSHGLG00000019445	SKIV2L2	98	98.049	ENSPPYG00000015469	MTREX	98	98.049	Pongo_abelii
ENSHGLG00000019445	SKIV2L2	94	82.791	ENSPCAG00000013120	MTREX	94	82.791	Procavia_capensis
ENSHGLG00000019445	SKIV2L2	99	92.835	ENSPCOG00000018092	MTREX	100	92.835	Propithecus_coquereli
ENSHGLG00000019445	SKIV2L2	100	97.601	ENSPVAG00000002445	MTREX	100	97.601	Pteropus_vampyrus
ENSHGLG00000019445	SKIV2L2	100	82.505	ENSPNYG00000006164	mtrex	100	82.459	Pundamilia_nyererei
ENSHGLG00000019445	SKIV2L2	100	85.837	ENSPNAG00000008794	mtrex	100	85.933	Pygocentrus_nattereri
ENSHGLG00000019445	SKIV2L2	99	96.501	ENSRNOG00000010125	Mtrex	97	96.501	Rattus_norvegicus
ENSHGLG00000019445	SKIV2L2	100	96.353	ENSRBIG00000034930	MTREX	100	96.353	Rhinopithecus_bieti
ENSHGLG00000019445	SKIV2L2	100	98.081	ENSRROG00000039895	MTREX	100	98.081	Rhinopithecus_roxellana
ENSHGLG00000019445	SKIV2L2	90	55.346	YJL050W	MTR4	89	55.346	Saccharomyces_cerevisiae
ENSHGLG00000019445	SKIV2L2	100	97.889	ENSSBOG00000026693	MTREX	100	97.889	Saimiri_boliviensis_boliviensis
ENSHGLG00000019445	SKIV2L2	96	94.985	ENSSHAG00000004600	MTREX	100	94.985	Sarcophilus_harrisii
ENSHGLG00000019445	SKIV2L2	100	87.548	ENSSFOG00015014355	skiv2l2	100	87.548	Scleropages_formosus
ENSHGLG00000019445	SKIV2L2	100	82.667	ENSSMAG00000007572	mtrex	100	82.887	Scophthalmus_maximus
ENSHGLG00000019445	SKIV2L2	100	83.461	ENSSDUG00000023789	mtrex	100	83.461	Seriola_dumerili
ENSHGLG00000019445	SKIV2L2	100	82.969	ENSSLDG00000006301	mtrex	100	83.270	Seriola_lalandi_dorsalis
ENSHGLG00000019445	SKIV2L2	100	93.954	ENSSARG00000008387	MTREX	100	93.954	Sorex_araneus
ENSHGLG00000019445	SKIV2L2	100	79.731	ENSSPUG00000007071	MTREX	100	79.731	Sphenodon_punctatus
ENSHGLG00000019445	SKIV2L2	92	87.198	ENSSPAG00000011319	mtrex	94	87.618	Stegastes_partitus
ENSHGLG00000019445	SKIV2L2	100	97.889	ENSSSCG00000016911	MTREX	100	97.889	Sus_scrofa
ENSHGLG00000019445	SKIV2L2	100	89.712	ENSTGUG00000002480	MTREX	100	89.712	Taeniopygia_guttata
ENSHGLG00000019445	SKIV2L2	100	82.729	ENSTRUG00000014571	mtrex	100	82.792	Takifugu_rubripes
ENSHGLG00000019445	SKIV2L2	100	81.670	ENSTBEG00000007769	MTREX	100	81.670	Tupaia_belangeri
ENSHGLG00000019445	SKIV2L2	100	97.885	ENSTTRG00000008678	MTREX	100	97.885	Tursiops_truncatus
ENSHGLG00000019445	SKIV2L2	100	97.697	ENSUAMG00000023061	MTREX	100	97.697	Ursus_americanus
ENSHGLG00000019445	SKIV2L2	100	97.031	ENSUMAG00000009373	MTREX	99	99.655	Ursus_maritimus
ENSHGLG00000019445	SKIV2L2	100	86.948	ENSVPAG00000011174	MTREX	100	86.948	Vicugna_pacos
ENSHGLG00000019445	SKIV2L2	100	97.697	ENSVVUG00000021337	MTREX	100	97.697	Vulpes_vulpes
ENSHGLG00000019445	SKIV2L2	100	88.473	ENSXETG00000032798	MTREX	100	88.280	Xenopus_tropicalis
ENSHGLG00000019445	SKIV2L2	100	83.222	ENSXMAG00000004799	mtrex	97	87.265	Xiphophorus_maculatus