EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSHGLG00000019481 (Gene tree)
Gene ID: -
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 31167 bases
Position: chrJH602102.1:13535965-13567131
Accession: 101711094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000027391	CMS1	PF14617.6	1.6e-32	1	1
ENSHGLP00000027391	DEAD	PF00270.29	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000027633	CMSS1-201	738	XM_004857968	ENSHGLP00000027391	245 (aa)	-	-

Gene Model

Click here to download ENSHGLG00000019481's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000019481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000019481	CMSS1	100	84.980	ENSG00000184220	CMSS1	99	92.593	Homo_sapiens
ENSHGLG00000019481	CMSS1	82	64.851	ENSAPOG00000010604	cmss1	81	64.500	Acanthochromis_polyacanthus
ENSHGLG00000019481	CMSS1	100	87.008	ENSAMEG00000004092	CMSS1	98	87.008	Ailuropoda_melanoleuca
ENSHGLG00000019481	CMSS1	82	54.455	ENSACIG00000021854	cmss1	74	54.000	Amphilophus_citrinellus
ENSHGLG00000019481	CMSS1	82	64.851	ENSAOCG00000013361	cmss1	69	64.500	Amphiprion_ocellaris
ENSHGLG00000019481	CMSS1	82	64.851	ENSAPEG00000005829	cmss1	69	64.500	Amphiprion_percula
ENSHGLG00000019481	CMSS1	92	62.281	ENSATEG00000008209	cmss1	79	62.174	Anabas_testudineus
ENSHGLG00000019481	CMSS1	92	69.604	ENSAPLG00000010542	CMSS1	99	69.604	Anas_platyrhynchos
ENSHGLG00000019481	CMSS1	92	67.391	ENSACAG00000011065	CMSS1	84	67.391	Anolis_carolinensis
ENSHGLG00000019481	CMSS1	100	83.858	ENSANAG00000023565	CMSS1	97	83.858	Aotus_nancymaae
ENSHGLG00000019481	CMSS1	82	60.891	ENSACLG00000027294	cmss1	69	60.500	Astatotilapia_calliptera
ENSHGLG00000019481	CMSS1	82	55.000	ENSAMXG00000002046	cmss1	68	55.000	Astyanax_mexicanus
ENSHGLG00000019481	CMSS1	98	85.542	ENSBTAG00000013663	CMSS1	92	85.375	Bos_taurus
ENSHGLG00000019481	CMSS1	100	83.399	ENSCJAG00000000610	CMSS1	97	83.399	Callithrix_jacchus
ENSHGLG00000019481	CMSS1	100	87.352	ENSCAFG00000009230	CMSS1	92	87.352	Canis_familiaris
ENSHGLG00000019481	CMSS1	99	77.470	ENSCAFG00020024156	-	79	77.470	Canis_lupus_dingo
ENSHGLG00000019481	CMSS1	100	87.352	ENSCAFG00020009464	-	92	87.352	Canis_lupus_dingo
ENSHGLG00000019481	CMSS1	100	84.980	ENSCHIG00000013003	CMSS1	92	84.980	Capra_hircus
ENSHGLG00000019481	CMSS1	99	84.000	ENSTSYG00000009266	CMSS1	96	84.000	Carlito_syrichta
ENSHGLG00000019481	CMSS1	91	75.983	ENSCAPG00000013584	CMSS1	100	71.368	Cavia_aperea
ENSHGLG00000019481	CMSS1	100	90.119	ENSCPOG00000014680	CMSS1	91	90.119	Cavia_porcellus
ENSHGLG00000019481	CMSS1	100	84.252	ENSCCAG00000034685	CMSS1	97	84.252	Cebus_capucinus
ENSHGLG00000019481	CMSS1	100	85.375	ENSCATG00000031980	CMSS1	97	85.375	Cercocebus_atys
ENSHGLG00000019481	CMSS1	93	94.714	ENSCLAG00000011241	CMSS1	97	94.714	Chinchilla_lanigera
ENSHGLG00000019481	CMSS1	96	86.885	ENSCSAG00000006024	CMSS1	99	86.885	Chlorocebus_sabaeus
ENSHGLG00000019481	CMSS1	100	65.217	ENSCHOG00000012098	CMSS1	92	65.217	Choloepus_hoffmanni
ENSHGLG00000019481	CMSS1	80	39.500	ENSCING00000014848	-	100	40.642	Ciona_intestinalis
ENSHGLG00000019481	CMSS1	51	38.889	ENSCSAVG00000002309	-	99	38.889	Ciona_savignyi
ENSHGLG00000019481	CMSS1	100	84.980	ENSCANG00000031337	CMSS1	97	84.980	Colobus_angolensis_palliatus
ENSHGLG00000019481	CMSS1	98	79.920	ENSCGRG00001014305	Cmss1	90	79.920	Cricetulus_griseus_chok1gshd
ENSHGLG00000019481	CMSS1	98	80.321	ENSCGRG00000006722	Cmss1	97	80.321	Cricetulus_griseus_crigri
ENSHGLG00000019481	CMSS1	82	62.376	ENSCSEG00000004958	cmss1	68	62.000	Cynoglossus_semilaevis
ENSHGLG00000019481	CMSS1	82	60.396	ENSCVAG00000005039	cmss1	69	60.500	Cyprinodon_variegatus
ENSHGLG00000019481	CMSS1	92	52.381	ENSDARG00000112579	cmss1	83	50.413	Danio_rerio
ENSHGLG00000019481	CMSS1	100	85.484	ENSDNOG00000040418	CMSS1	90	85.484	Dasypus_novemcinctus
ENSHGLG00000019481	CMSS1	99	85.600	ENSDORG00000010461	Cmss1	91	84.980	Dipodomys_ordii
ENSHGLG00000019481	CMSS1	54	50.000	ENSEBUG00000002156	-	96	50.000	Eptatretus_burgeri
ENSHGLG00000019481	CMSS1	93	92.070	ENSEASG00005010966	CMSS1	99	91.781	Equus_asinus_asinus
ENSHGLG00000019481	CMSS1	99	86.400	ENSECAG00000015662	CMSS1	99	90.708	Equus_caballus
ENSHGLG00000019481	CMSS1	93	60.352	ENSEEUG00000007624	-	81	61.233	Erinaceus_europaeus
ENSHGLG00000019481	CMSS1	82	62.871	ENSELUG00000019459	cmss1	79	59.746	Esox_lucius
ENSHGLG00000019481	CMSS1	100	88.538	ENSFCAG00000044577	CMSS1	91	88.538	Felis_catus
ENSHGLG00000019481	CMSS1	92	67.257	ENSFALG00000005816	CMSS1	95	67.257	Ficedula_albicollis
ENSHGLG00000019481	CMSS1	93	95.595	ENSFDAG00000012577	CMSS1	99	95.595	Fukomys_damarensis
ENSHGLG00000019481	CMSS1	93	60.173	ENSFHEG00000012008	cmss1	95	61.039	Fundulus_heteroclitus
ENSHGLG00000019481	CMSS1	82	62.376	ENSGMOG00000016729	cmss1	72	62.000	Gadus_morhua
ENSHGLG00000019481	CMSS1	92	69.912	ENSGALG00000015267	CMSS1	87	69.912	Gallus_gallus
ENSHGLG00000019481	CMSS1	84	63.285	ENSGAFG00000021217	cmss1	76	62.500	Gambusia_affinis
ENSHGLG00000019481	CMSS1	82	56.931	ENSGACG00000002798	cmss1	72	56.500	Gasterosteus_aculeatus
ENSHGLG00000019481	CMSS1	92	71.681	ENSGAGG00000019861	CMSS1	88	71.681	Gopherus_agassizii
ENSHGLG00000019481	CMSS1	100	85.375	ENSGGOG00000014125	CMSS1	97	85.375	Gorilla_gorilla
ENSHGLG00000019481	CMSS1	82	60.891	ENSHBUG00000008431	cmss1	71	60.500	Haplochromis_burtoni
ENSHGLG00000019481	CMSS1	100	99.592	ENSHGLG00100010314	CMSS1	98	99.592	Heterocephalus_glaber_male
ENSHGLG00000019481	CMSS1	89	63.927	ENSHCOG00000003222	cmss1	74	63.927	Hippocampus_comes
ENSHGLG00000019481	CMSS1	90	57.014	ENSIPUG00000011591	cmss1	76	57.014	Ictalurus_punctatus
ENSHGLG00000019481	CMSS1	99	87.200	ENSSTOG00000019366	CMSS1	90	87.200	Ictidomys_tridecemlineatus
ENSHGLG00000019481	CMSS1	100	82.213	ENSJJAG00000014894	Cmss1	89	89.500	Jaculus_jaculus
ENSHGLG00000019481	CMSS1	82	55.446	ENSKMAG00000002390	cmss1	80	55.000	Kryptolebias_marmoratus
ENSHGLG00000019481	CMSS1	90	53.333	ENSLBEG00000006298	cmss1	82	58.209	Labrus_bergylta
ENSHGLG00000019481	CMSS1	92	66.228	ENSLACG00000009293	CMSS1	99	66.228	Latimeria_chalumnae
ENSHGLG00000019481	CMSS1	92	57.709	ENSLOCG00000009391	cmss1	80	57.709	Lepisosteus_oculatus
ENSHGLG00000019481	CMSS1	93	89.427	ENSLAFG00000017509	CMSS1	99	89.427	Loxodonta_africana
ENSHGLG00000019481	CMSS1	100	85.771	ENSMFAG00000045006	CMSS1	97	85.771	Macaca_fascicularis
ENSHGLG00000019481	CMSS1	100	85.375	ENSMMUG00000002939	CMSS1	96	90.783	Macaca_mulatta
ENSHGLG00000019481	CMSS1	100	85.375	ENSMNEG00000031315	CMSS1	97	85.375	Macaca_nemestrina
ENSHGLG00000019481	CMSS1	100	84.980	ENSMLEG00000033660	CMSS1	97	84.980	Mandrillus_leucophaeus
ENSHGLG00000019481	CMSS1	93	60.870	ENSMAMG00000017176	cmss1	79	60.870	Mastacembelus_armatus
ENSHGLG00000019481	CMSS1	82	60.891	ENSMZEG00005021886	cmss1	69	60.500	Maylandia_zebra
ENSHGLG00000019481	CMSS1	92	69.027	ENSMGAG00000014360	CMSS1	99	69.027	Meleagris_gallopavo
ENSHGLG00000019481	CMSS1	99	56.574	ENSMAUG00000020609	Cmss1	87	56.574	Mesocricetus_auratus
ENSHGLG00000019481	CMSS1	100	86.614	ENSMICG00000048977	CMSS1	98	86.614	Microcebus_murinus
ENSHGLG00000019481	CMSS1	99	81.377	ENSMOCG00000021937	Cmss1	90	81.377	Microtus_ochrogaster
ENSHGLG00000019481	CMSS1	82	62.376	ENSMMOG00000019794	cmss1	83	62.000	Mola_mola
ENSHGLG00000019481	CMSS1	97	74.486	ENSMODG00000002275	CMSS1	92	74.486	Monodelphis_domestica
ENSHGLG00000019481	CMSS1	82	64.851	ENSMALG00000004250	cmss1	69	64.500	Monopterus_albus
ENSHGLG00000019481	CMSS1	99	80.645	MGP_CAROLIEiJ_G0020824	Cmss1	90	80.645	Mus_caroli
ENSHGLG00000019481	CMSS1	99	81.855	ENSMUSG00000022748	Cmss1	90	81.855	Mus_musculus
ENSHGLG00000019481	CMSS1	98	80.567	MGP_PahariEiJ_G0016524	Cmss1	89	80.567	Mus_pahari
ENSHGLG00000019481	CMSS1	99	81.855	MGP_SPRETEiJ_G0021724	Cmss1	90	81.855	Mus_spretus
ENSHGLG00000019481	CMSS1	96	90.535	ENSMPUG00000011324	CMSS1	97	88.889	Mustela_putorius_furo
ENSHGLG00000019481	CMSS1	100	85.098	ENSMLUG00000001131	CMSS1	97	85.098	Myotis_lucifugus
ENSHGLG00000019481	CMSS1	98	83.936	ENSNGAG00000020316	Cmss1	89	83.936	Nannospalax_galili
ENSHGLG00000019481	CMSS1	82	60.396	ENSNBRG00000003095	cmss1	69	60.000	Neolamprologus_brichardi
ENSHGLG00000019481	CMSS1	100	86.561	ENSNLEG00000034172	CMSS1	97	86.561	Nomascus_leucogenys
ENSHGLG00000019481	CMSS1	93	66.079	ENSMEUG00000014505	CMSS1	99	66.079	Notamacropus_eugenii
ENSHGLG00000019481	CMSS1	100	85.771	ENSOPRG00000002986	CMSS1	91	85.771	Ochotona_princeps
ENSHGLG00000019481	CMSS1	100	76.327	ENSODEG00000009446	-	91	76.327	Octodon_degus
ENSHGLG00000019481	CMSS1	100	88.538	ENSODEG00000005226	-	91	88.538	Octodon_degus
ENSHGLG00000019481	CMSS1	100	77.075	ENSODEG00000001853	-	91	77.075	Octodon_degus
ENSHGLG00000019481	CMSS1	100	88.163	ENSODEG00000003558	-	90	88.163	Octodon_degus
ENSHGLG00000019481	CMSS1	82	60.891	ENSONIG00000006678	cmss1	77	60.500	Oreochromis_niloticus
ENSHGLG00000019481	CMSS1	100	70.800	ENSOANG00000007529	CMSS1	99	74.459	Ornithorhynchus_anatinus
ENSHGLG00000019481	CMSS1	100	84.585	ENSOCUG00000025366	CMSS1	92	84.585	Oryctolagus_cuniculus
ENSHGLG00000019481	CMSS1	98	58.750	ENSORLG00000020340	cmss1	82	59.583	Oryzias_latipes
ENSHGLG00000019481	CMSS1	88	57.870	ENSORLG00020012235	cmss1	85	58.000	Oryzias_latipes_hni
ENSHGLG00000019481	CMSS1	82	57.921	ENSORLG00015015551	cmss1	75	57.500	Oryzias_latipes_hsok
ENSHGLG00000019481	CMSS1	82	64.851	ENSOMEG00000012555	cmss1	69	64.500	Oryzias_melastigma
ENSHGLG00000019481	CMSS1	93	91.189	ENSOGAG00000002045	CMSS1	99	91.189	Otolemur_garnettii
ENSHGLG00000019481	CMSS1	100	85.039	ENSOARG00000017899	CMSS1	87	85.039	Ovis_aries
ENSHGLG00000019481	CMSS1	100	85.375	ENSPPAG00000038515	CMSS1	93	85.375	Pan_paniscus
ENSHGLG00000019481	CMSS1	100	88.538	ENSPPRG00000016767	CMSS1	91	88.538	Panthera_pardus
ENSHGLG00000019481	CMSS1	100	87.747	ENSPTIG00000018274	CMSS1	91	87.747	Panthera_tigris_altaica
ENSHGLG00000019481	CMSS1	100	84.585	ENSPTRG00000015157	CMSS1	93	90.749	Pan_troglodytes
ENSHGLG00000019481	CMSS1	100	86.939	ENSPANG00000019980	CMSS1	97	86.939	Papio_anubis
ENSHGLG00000019481	CMSS1	92	62.174	ENSPKIG00000012609	cmss1	85	62.338	Paramormyrops_kingsleyae
ENSHGLG00000019481	CMSS1	92	73.009	ENSPSIG00000003849	CMSS1	99	73.009	Pelodiscus_sinensis
ENSHGLG00000019481	CMSS1	82	62.562	ENSPMGG00000010286	cmss1	86	62.189	Periophthalmus_magnuspinnatus
ENSHGLG00000019481	CMSS1	99	80.400	ENSPEMG00000016384	Cmss1	89	80.400	Peromyscus_maniculatus_bairdii
ENSHGLG00000019481	CMSS1	83	52.451	ENSPMAG00000001146	cmss1	98	52.500	Petromyzon_marinus
ENSHGLG00000019481	CMSS1	98	72.874	ENSPCIG00000015656	CMSS1	93	73.171	Phascolarctos_cinereus
ENSHGLG00000019481	CMSS1	92	59.565	ENSPFOG00000016849	cmss1	70	62.000	Poecilia_formosa
ENSHGLG00000019481	CMSS1	92	59.130	ENSPLAG00000008323	cmss1	70	61.500	Poecilia_latipinna
ENSHGLG00000019481	CMSS1	92	59.565	ENSPMEG00000021020	cmss1	69	62.000	Poecilia_mexicana
ENSHGLG00000019481	CMSS1	93	59.483	ENSPREG00000007618	cmss1	68	61.500	Poecilia_reticulata
ENSHGLG00000019481	CMSS1	100	84.585	ENSPPYG00000013606	CMSS1	93	84.585	Pongo_abelii
ENSHGLG00000019481	CMSS1	100	87.402	ENSPCOG00000020035	CMSS1	98	87.402	Propithecus_coquereli
ENSHGLG00000019481	CMSS1	100	73.518	ENSPVAG00000017031	CMSS1	91	73.518	Pteropus_vampyrus
ENSHGLG00000019481	CMSS1	72	63.636	ENSPNYG00000013428	cmss1	64	63.218	Pundamilia_nyererei
ENSHGLG00000019481	CMSS1	93	53.680	ENSPNAG00000007912	cmss1	79	54.978	Pygocentrus_nattereri
ENSHGLG00000019481	CMSS1	99	80.645	ENSRNOG00000027888	Cmss1	96	80.645	Rattus_norvegicus
ENSHGLG00000019481	CMSS1	100	85.375	ENSRBIG00000037931	CMSS1	97	85.375	Rhinopithecus_bieti
ENSHGLG00000019481	CMSS1	100	85.375	ENSRROG00000042910	CMSS1	97	85.375	Rhinopithecus_roxellana
ENSHGLG00000019481	CMSS1	100	83.858	ENSSBOG00000030980	CMSS1	97	83.858	Saimiri_boliviensis_boliviensis
ENSHGLG00000019481	CMSS1	98	71.825	ENSSHAG00000009321	CMSS1	99	71.825	Sarcophilus_harrisii
ENSHGLG00000019481	CMSS1	92	60.870	ENSSFOG00015001509	cmss1	80	61.039	Scleropages_formosus
ENSHGLG00000019481	CMSS1	90	62.832	ENSSMAG00000001653	cmss1	69	63.500	Scophthalmus_maximus
ENSHGLG00000019481	CMSS1	92	61.572	ENSSDUG00000007719	cmss1	80	61.572	Seriola_dumerili
ENSHGLG00000019481	CMSS1	84	65.217	ENSSLDG00000012300	cmss1	75	60.000	Seriola_lalandi_dorsalis
ENSHGLG00000019481	CMSS1	100	70.356	ENSSARG00000003584	CMSS1	90	70.356	Sorex_araneus
ENSHGLG00000019481	CMSS1	92	70.796	ENSSPUG00000003865	CMSS1	100	70.796	Sphenodon_punctatus
ENSHGLG00000019481	CMSS1	84	64.563	ENSSPAG00000019182	cmss1	62	64.000	Stegastes_partitus
ENSHGLG00000019481	CMSS1	100	87.747	ENSSSCG00000011970	CMSS1	91	87.747	Sus_scrofa
ENSHGLG00000019481	CMSS1	92	66.814	ENSTGUG00000013635	CMSS1	99	66.814	Taeniopygia_guttata
ENSHGLG00000019481	CMSS1	82	62.376	ENSTRUG00000015265	cmss1	71	62.000	Takifugu_rubripes
ENSHGLG00000019481	CMSS1	82	56.436	ENSTNIG00000002880	cmss1	72	56.000	Tetraodon_nigroviridis
ENSHGLG00000019481	CMSS1	92	69.469	ENSTBEG00000016722	CMSS1	81	69.469	Tupaia_belangeri
ENSHGLG00000019481	CMSS1	100	84.190	ENSTTRG00000001562	CMSS1	91	84.190	Tursiops_truncatus
ENSHGLG00000019481	CMSS1	100	88.538	ENSUAMG00000024209	CMSS1	100	93.722	Ursus_americanus
ENSHGLG00000019481	CMSS1	100	87.747	ENSUMAG00000001983	CMSS1	98	87.747	Ursus_maritimus
ENSHGLG00000019481	CMSS1	93	74.890	ENSVPAG00000000263	CMSS1	81	74.890	Vicugna_pacos
ENSHGLG00000019481	CMSS1	97	88.618	ENSVVUG00000021647	-	100	88.618	Vulpes_vulpes
ENSHGLG00000019481	CMSS1	92	89.381	ENSVVUG00000007776	-	89	89.381	Vulpes_vulpes
ENSHGLG00000019481	CMSS1	93	63.319	ENSXETG00000011858	cmss1	89	59.919	Xenopus_tropicalis
ENSHGLG00000019481	CMSS1	85	62.500	ENSXCOG00000018724	cmss1	68	62.000	Xiphophorus_couchianus
ENSHGLG00000019481	CMSS1	85	62.500	ENSXMAG00000011243	cmss1	75	62.000	Xiphophorus_maculatus