EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000019782 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 291 bases
Position: chrJH602268.1:67289-67579
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000027735	LSM	PF01423.22	2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000027992	-	291	-	ENSHGLP00000027735	96 (aa)	-	UPI00034FCB80

Gene Model

Click here to download ENSHGLG00000019782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000019782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000019782	-	92	31.818	ENSHGLG00000005711	LSM1	65	31.818
ENSHGLG00000019782	-	71	94.118	ENSHGLG00000001988	-	99	94.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000019782	-	100	93.750	ENSG00000128534	LSM8	100	94.030	Homo_sapiens
ENSHGLG00000019782	-	100	86.458	ENSAPOG00000008649	lsm8	100	86.458	Acanthochromis_polyacanthus
ENSHGLG00000019782	-	100	93.750	ENSAMEG00000001162	LSM8	100	93.750	Ailuropoda_melanoleuca
ENSHGLG00000019782	-	78	90.667	ENSACIG00000014694	lsm8	100	90.667	Amphilophus_citrinellus
ENSHGLG00000019782	-	100	86.458	ENSAOCG00000013926	lsm8	100	86.458	Amphiprion_ocellaris
ENSHGLG00000019782	-	100	86.458	ENSAPEG00000023502	lsm8	100	86.458	Amphiprion_percula
ENSHGLG00000019782	-	78	90.667	ENSATEG00000023432	lsm8	100	90.667	Anabas_testudineus
ENSHGLG00000019782	-	95	86.170	ENSAPLG00000005115	LSM8	95	86.170	Anas_platyrhynchos
ENSHGLG00000019782	-	100	93.750	ENSANAG00000027771	LSM8	100	93.750	Aotus_nancymaae
ENSHGLG00000019782	-	100	86.458	ENSACLG00000011253	lsm8	100	86.458	Astatotilapia_calliptera
ENSHGLG00000019782	-	100	88.542	ENSAMXG00000042902	lsm8	100	88.542	Astyanax_mexicanus
ENSHGLG00000019782	-	100	93.750	ENSBTAG00000012649	LSM8	100	93.750	Bos_taurus
ENSHGLG00000019782	-	98	53.191	WBGene00003082	lsm-8	96	53.191	Caenorhabditis_elegans
ENSHGLG00000019782	-	100	93.750	ENSCJAG00000046406	LSM8	100	93.750	Callithrix_jacchus
ENSHGLG00000019782	-	99	94.737	ENSCAFG00000016459	LSM8	96	94.737	Canis_familiaris
ENSHGLG00000019782	-	89	92.941	ENSCAFG00020012800	-	66	92.941	Canis_lupus_dingo
ENSHGLG00000019782	-	100	93.750	ENSCAFG00020007643	-	100	93.750	Canis_lupus_dingo
ENSHGLG00000019782	-	92	90.909	ENSCHIG00000014201	LSM8	94	90.909	Capra_hircus
ENSHGLG00000019782	-	100	93.750	ENSTSYG00000032434	LSM8	100	93.750	Carlito_syrichta
ENSHGLG00000019782	-	77	91.892	ENSCAPG00000008253	LSM8	100	91.892	Cavia_aperea
ENSHGLG00000019782	-	100	93.750	ENSCPOG00000035673	LSM8	100	93.750	Cavia_porcellus
ENSHGLG00000019782	-	100	93.750	ENSCCAG00000021329	LSM8	100	93.750	Cebus_capucinus
ENSHGLG00000019782	-	100	93.750	ENSCATG00000045302	LSM8	100	93.750	Cercocebus_atys
ENSHGLG00000019782	-	100	93.750	ENSCLAG00000003726	LSM8	100	93.750	Chinchilla_lanigera
ENSHGLG00000019782	-	100	90.625	ENSCSAG00000019007	-	100	90.625	Chlorocebus_sabaeus
ENSHGLG00000019782	-	100	93.750	ENSCSAG00000010802	-	100	93.750	Chlorocebus_sabaeus
ENSHGLG00000019782	-	89	94.118	ENSCPBG00000008154	LSM8	87	94.118	Chrysemys_picta_bellii
ENSHGLG00000019782	-	100	68.750	ENSCING00000024877	-	100	68.750	Ciona_intestinalis
ENSHGLG00000019782	-	100	93.750	ENSCANG00000040728	LSM8	100	93.750	Colobus_angolensis_palliatus
ENSHGLG00000019782	-	100	93.750	ENSCGRG00001000450	Lsm8	100	93.750	Cricetulus_griseus_chok1gshd
ENSHGLG00000019782	-	89	94.118	ENSCGRG00000005587	Lsm8	100	94.118	Cricetulus_griseus_crigri
ENSHGLG00000019782	-	100	76.042	ENSCSEG00000004164	lsm8	100	76.042	Cynoglossus_semilaevis
ENSHGLG00000019782	-	100	85.417	ENSCVAG00000020547	lsm8	100	85.417	Cyprinodon_variegatus
ENSHGLG00000019782	-	100	85.417	ENSDARG00000091656	lsm8	100	85.417	Danio_rerio
ENSHGLG00000019782	-	100	93.750	ENSDNOG00000034613	LSM8	100	93.750	Dasypus_novemcinctus
ENSHGLG00000019782	-	100	93.750	ENSDORG00000027868	Lsm8	100	93.750	Dipodomys_ordii
ENSHGLG00000019782	-	98	64.894	FBgn0035271	CG2021	99	64.894	Drosophila_melanogaster
ENSHGLG00000019782	-	100	92.708	ENSETEG00000011594	LSM8	100	92.708	Echinops_telfairi
ENSHGLG00000019782	-	75	88.889	ENSEBUG00000012017	lsm8	97	88.889	Eptatretus_burgeri
ENSHGLG00000019782	-	100	93.750	ENSEASG00005008932	LSM8	62	93.750	Equus_asinus_asinus
ENSHGLG00000019782	-	92	90.909	ENSECAG00000024025	LSM8	80	90.909	Equus_caballus
ENSHGLG00000019782	-	100	85.417	ENSELUG00000010138	lsm8	100	85.417	Esox_lucius
ENSHGLG00000019782	-	100	93.750	ENSFCAG00000036620	-	100	93.750	Felis_catus
ENSHGLG00000019782	-	85	69.512	ENSFCAG00000044794	-	83	69.512	Felis_catus
ENSHGLG00000019782	-	100	92.708	ENSFALG00000010023	LSM8	100	92.708	Ficedula_albicollis
ENSHGLG00000019782	-	100	93.750	ENSFDAG00000019530	LSM8	100	93.750	Fukomys_damarensis
ENSHGLG00000019782	-	100	86.458	ENSFHEG00000013729	lsm8	100	86.458	Fundulus_heteroclitus
ENSHGLG00000019782	-	100	92.708	ENSGALG00000009110	LSM8	100	92.708	Gallus_gallus
ENSHGLG00000019782	-	100	85.417	ENSGAFG00000001135	lsm8	100	85.417	Gambusia_affinis
ENSHGLG00000019782	-	100	93.750	ENSGAGG00000017366	LSM8	100	93.750	Gopherus_agassizii
ENSHGLG00000019782	-	100	93.750	ENSGGOG00000041883	LSM8	100	93.750	Gorilla_gorilla
ENSHGLG00000019782	-	100	86.458	ENSHBUG00000003646	lsm8	100	86.458	Haplochromis_burtoni
ENSHGLG00000019782	-	100	89.583	ENSHGLG00100012166	-	100	89.583	Heterocephalus_glaber_male
ENSHGLG00000019782	-	99	91.579	ENSHGLG00100003934	-	95	91.579	Heterocephalus_glaber_male
ENSHGLG00000019782	-	100	85.417	ENSHCOG00000005037	lsm8	100	85.417	Hippocampus_comes
ENSHGLG00000019782	-	100	88.542	ENSIPUG00000019811	NAA38	100	88.542	Ictalurus_punctatus
ENSHGLG00000019782	-	100	93.750	ENSSTOG00000009039	LSM8	100	93.750	Ictidomys_tridecemlineatus
ENSHGLG00000019782	-	92	81.818	ENSSTOG00000034801	-	81	81.818	Ictidomys_tridecemlineatus
ENSHGLG00000019782	-	100	93.750	ENSJJAG00000009031	Lsm8	99	93.750	Jaculus_jaculus
ENSHGLG00000019782	-	100	86.458	ENSKMAG00000018983	lsm8	100	86.458	Kryptolebias_marmoratus
ENSHGLG00000019782	-	100	88.542	ENSLACG00000010231	LSM8	100	88.542	Latimeria_chalumnae
ENSHGLG00000019782	-	100	87.500	ENSLOCG00000015580	lsm8	100	87.500	Lepisosteus_oculatus
ENSHGLG00000019782	-	100	92.784	ENSLAFG00000011242	LSM8	100	92.784	Loxodonta_africana
ENSHGLG00000019782	-	100	89.583	ENSMFAG00000013044	-	100	89.583	Macaca_fascicularis
ENSHGLG00000019782	-	100	93.750	ENSMFAG00000035798	LSM8	100	93.750	Macaca_fascicularis
ENSHGLG00000019782	-	100	93.750	ENSMMUG00000046401	LSM8	97	94.444	Macaca_mulatta
ENSHGLG00000019782	-	78	89.333	ENSMNEG00000011141	-	100	89.333	Macaca_nemestrina
ENSHGLG00000019782	-	100	93.750	ENSMNEG00000036764	-	100	93.750	Macaca_nemestrina
ENSHGLG00000019782	-	100	80.208	ENSMLEG00000039324	-	100	80.208	Mandrillus_leucophaeus
ENSHGLG00000019782	-	100	93.750	ENSMLEG00000035828	-	100	93.750	Mandrillus_leucophaeus
ENSHGLG00000019782	-	78	90.667	ENSMAMG00000018839	lsm8	100	90.667	Mastacembelus_armatus
ENSHGLG00000019782	-	100	86.458	ENSMZEG00005019138	lsm8	100	86.458	Maylandia_zebra
ENSHGLG00000019782	-	100	92.708	ENSMGAG00000008808	LSM8	100	92.708	Meleagris_gallopavo
ENSHGLG00000019782	-	100	86.458	ENSMAUG00000015721	-	100	86.458	Mesocricetus_auratus
ENSHGLG00000019782	-	75	87.500	ENSMAUG00000020287	-	97	87.500	Mesocricetus_auratus
ENSHGLG00000019782	-	100	80.208	ENSMAUG00000015356	-	100	80.208	Mesocricetus_auratus
ENSHGLG00000019782	-	100	93.750	ENSMICG00000042730	LSM8	100	93.750	Microcebus_murinus
ENSHGLG00000019782	-	100	93.750	ENSMOCG00000001688	Lsm8	100	93.750	Microtus_ochrogaster
ENSHGLG00000019782	-	78	90.667	ENSMMOG00000006046	lsm8	100	90.667	Mola_mola
ENSHGLG00000019782	-	76	81.333	ENSMODG00000015729	LSM8	96	81.333	Monodelphis_domestica
ENSHGLG00000019782	-	100	87.500	ENSMALG00000000405	lsm8	100	87.500	Monopterus_albus
ENSHGLG00000019782	-	100	93.750	MGP_CAROLIEiJ_G0028125	-	100	93.750	Mus_caroli
ENSHGLG00000019782	-	100	93.750	ENSMUSG00000044155	Lsm8	100	93.750	Mus_musculus
ENSHGLG00000019782	-	100	93.750	MGP_PahariEiJ_G0021881	Lsm8	100	93.750	Mus_pahari
ENSHGLG00000019782	-	100	93.750	MGP_SPRETEiJ_G0029125	-	100	93.750	Mus_spretus
ENSHGLG00000019782	-	100	92.708	ENSMLUG00000027762	-	100	92.708	Myotis_lucifugus
ENSHGLG00000019782	-	100	93.750	ENSMLUG00000006837	-	100	93.750	Myotis_lucifugus
ENSHGLG00000019782	-	100	93.750	ENSNGAG00000016554	Lsm8	100	93.750	Nannospalax_galili
ENSHGLG00000019782	-	100	86.458	ENSNBRG00000014441	lsm8	100	86.458	Neolamprologus_brichardi
ENSHGLG00000019782	-	100	93.750	ENSNLEG00000011768	LSM8	100	93.750	Nomascus_leucogenys
ENSHGLG00000019782	-	100	82.292	ENSMEUG00000007801	LSM8	100	82.292	Notamacropus_eugenii
ENSHGLG00000019782	-	89	94.118	ENSOPRG00000014809	LSM8	100	94.118	Ochotona_princeps
ENSHGLG00000019782	-	90	79.070	ENSODEG00000020290	-	100	79.070	Octodon_degus
ENSHGLG00000019782	-	100	93.750	ENSODEG00000000418	-	100	93.750	Octodon_degus
ENSHGLG00000019782	-	100	92.708	ENSOANG00000014536	LSM8	100	92.708	Ornithorhynchus_anatinus
ENSHGLG00000019782	-	100	92.784	ENSOCUG00000017359	LSM8	100	92.784	Oryctolagus_cuniculus
ENSHGLG00000019782	-	100	78.125	ENSORLG00000017432	lsm8	100	78.125	Oryzias_latipes
ENSHGLG00000019782	-	100	78.125	ENSORLG00020004376	lsm8	100	78.125	Oryzias_latipes_hni
ENSHGLG00000019782	-	100	86.458	ENSORLG00015003757	lsm8	100	86.458	Oryzias_latipes_hsok
ENSHGLG00000019782	-	100	76.042	ENSOMEG00000022509	lsm8	100	76.042	Oryzias_melastigma
ENSHGLG00000019782	-	100	93.750	ENSOGAG00000013377	LSM8	100	93.750	Otolemur_garnettii
ENSHGLG00000019782	-	100	93.750	ENSOARG00000017974	LSM8	100	93.750	Ovis_aries
ENSHGLG00000019782	-	78	93.333	ENSPPAG00000043228	-	100	93.333	Pan_paniscus
ENSHGLG00000019782	-	100	93.750	ENSPPRG00000006444	LSM8	100	93.750	Panthera_pardus
ENSHGLG00000019782	-	100	93.750	ENSPTIG00000004722	LSM8	100	93.750	Panthera_tigris_altaica
ENSHGLG00000019782	-	78	93.333	ENSPTRG00000046596	-	100	93.333	Pan_troglodytes
ENSHGLG00000019782	-	100	87.500	ENSPANG00000019395	-	100	87.500	Papio_anubis
ENSHGLG00000019782	-	100	93.750	ENSPANG00000035470	-	100	93.750	Papio_anubis
ENSHGLG00000019782	-	89	91.765	ENSPKIG00000006092	lsm8	86	91.765	Paramormyrops_kingsleyae
ENSHGLG00000019782	-	78	93.333	ENSPSIG00000017054	LSM8	100	93.333	Pelodiscus_sinensis
ENSHGLG00000019782	-	78	90.667	ENSPMGG00000016442	lsm8	100	90.667	Periophthalmus_magnuspinnatus
ENSHGLG00000019782	-	75	94.444	ENSPEMG00000009153	Lsm8	97	94.444	Peromyscus_maniculatus_bairdii
ENSHGLG00000019782	-	97	94.624	ENSPCIG00000021467	LSM8	98	94.624	Phascolarctos_cinereus
ENSHGLG00000019782	-	100	85.417	ENSPFOG00000012340	lsm8	100	85.417	Poecilia_formosa
ENSHGLG00000019782	-	100	80.208	ENSPLAG00000000516	lsm8	100	80.208	Poecilia_latipinna
ENSHGLG00000019782	-	100	85.417	ENSPMEG00000022567	lsm8	100	85.417	Poecilia_mexicana
ENSHGLG00000019782	-	75	81.013	ENSPREG00000005527	lsm8	71	81.013	Poecilia_reticulata
ENSHGLG00000019782	-	100	93.750	ENSPPYG00000017942	LSM8	100	93.750	Pongo_abelii
ENSHGLG00000019782	-	99	74.737	ENSPCOG00000017982	-	99	74.737	Propithecus_coquereli
ENSHGLG00000019782	-	100	93.750	ENSPCOG00000003309	-	100	93.750	Propithecus_coquereli
ENSHGLG00000019782	-	89	92.941	ENSPVAG00000000990	LSM8	100	92.941	Pteropus_vampyrus
ENSHGLG00000019782	-	100	86.458	ENSPNYG00000011448	lsm8	100	86.458	Pundamilia_nyererei
ENSHGLG00000019782	-	100	88.542	ENSPNAG00000010252	lsm8	100	88.542	Pygocentrus_nattereri
ENSHGLG00000019782	-	100	93.750	ENSRNOG00000058677	Lsm8	100	93.750	Rattus_norvegicus
ENSHGLG00000019782	-	100	93.750	ENSRBIG00000032851	LSM8	100	93.750	Rhinopithecus_bieti
ENSHGLG00000019782	-	100	93.750	ENSRROG00000039618	LSM8	100	93.750	Rhinopithecus_roxellana
ENSHGLG00000019782	-	100	93.750	ENSSBOG00000023223	LSM8	100	93.750	Saimiri_boliviensis_boliviensis
ENSHGLG00000019782	-	100	93.750	ENSSHAG00000018435	-	100	93.750	Sarcophilus_harrisii
ENSHGLG00000019782	-	100	85.417	ENSSFOG00015004412	lsm8	100	85.417	Scleropages_formosus
ENSHGLG00000019782	-	78	90.667	ENSSMAG00000009458	lsm8	100	90.667	Scophthalmus_maximus
ENSHGLG00000019782	-	100	86.458	ENSSDUG00000014702	lsm8	100	86.458	Seriola_dumerili
ENSHGLG00000019782	-	78	90.667	ENSSLDG00000016870	lsm8	100	90.667	Seriola_lalandi_dorsalis
ENSHGLG00000019782	-	75	94.444	ENSSARG00000009628	-	100	94.444	Sorex_araneus
ENSHGLG00000019782	-	100	93.750	ENSSPUG00000017419	LSM8	100	93.750	Sphenodon_punctatus
ENSHGLG00000019782	-	100	86.458	ENSSPAG00000021422	lsm8	100	86.458	Stegastes_partitus
ENSHGLG00000019782	-	100	93.750	ENSSSCG00000021652	LSM8	100	93.750	Sus_scrofa
ENSHGLG00000019782	-	100	90.625	ENSTGUG00000016823	-	100	90.625	Taeniopygia_guttata
ENSHGLG00000019782	-	100	91.667	ENSTGUG00000004730	-	100	91.667	Taeniopygia_guttata
ENSHGLG00000019782	-	100	86.458	ENSTRUG00000025192	lsm8	100	86.458	Takifugu_rubripes
ENSHGLG00000019782	-	100	86.458	ENSTNIG00000002864	lsm8	100	86.458	Tetraodon_nigroviridis
ENSHGLG00000019782	-	100	93.750	ENSTTRG00000001023	LSM8	100	93.750	Tursiops_truncatus
ENSHGLG00000019782	-	92	90.909	ENSUAMG00000006943	-	92	90.909	Ursus_americanus
ENSHGLG00000019782	-	92	90.909	ENSUMAG00000003073	LSM8	94	90.909	Ursus_maritimus
ENSHGLG00000019782	-	100	93.750	ENSVPAG00000001530	LSM8	100	93.750	Vicugna_pacos
ENSHGLG00000019782	-	78	90.667	ENSVVUG00000013248	-	82	90.667	Vulpes_vulpes
ENSHGLG00000019782	-	91	93.103	ENSXETG00000021829	lsm8	90	93.103	Xenopus_tropicalis
ENSHGLG00000019782	-	100	84.375	ENSXCOG00000012938	lsm8	100	84.375	Xiphophorus_couchianus
ENSHGLG00000019782	-	100	85.417	ENSXMAG00000025919	lsm8	100	85.417	Xiphophorus_maculatus