EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000020243 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Plus strand
Length: 1068 bases
Position: chrJH602181.1:1037404-1038471
Accession: 101717304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000028086	KH_1	PF00013.29	2.3e-50	1	3
ENSHGLP00000028086	KH_1	PF00013.29	2.3e-50	2	3
ENSHGLP00000028086	KH_1	PF00013.29	2.3e-50	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000028453	-	1068	XM_004870052	ENSHGLP00000028086	355 (aa)	XP_004870109	UPI00034FE3BE

Gene Model

Click here to download ENSHGLG00000020243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000020243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000020243	-	68	33.333	ENSHGLG00000013239	KHSRP	50	33.333
ENSHGLG00000020243	-	67	39.189	ENSHGLG00000003180	NOVA1	55	39.189
ENSHGLG00000020243	-	98	52.125	ENSHGLG00000012018	PCBP4	77	52.125
ENSHGLG00000020243	-	100	80.381	ENSHGLG00000001776	PCBP2	100	80.381
ENSHGLG00000020243	-	99	68.750	ENSHGLG00000017847	-	96	68.750
ENSHGLG00000020243	-	100	77.929	ENSHGLG00000019854	-	100	77.929
ENSHGLG00000020243	-	97	65.029	ENSHGLG00000006371	-	95	65.029
ENSHGLG00000020243	-	100	98.028	ENSHGLG00000020345	Pcbp1	100	98.028
ENSHGLG00000020243	-	99	65.934	ENSHGLG00000018620	PCBP3	91	65.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000020243	-	100	97.753	ENSG00000169564	PCBP1	100	97.753	Homo_sapiens
ENSHGLG00000020243	-	100	94.944	ENSAMEG00000016094	PCBP1	100	94.944	Ailuropoda_melanoleuca
ENSHGLG00000020243	-	80	92.933	ENSANAG00000031745	-	100	92.933	Aotus_nancymaae
ENSHGLG00000020243	-	80	90.459	ENSANAG00000022494	-	100	90.459	Aotus_nancymaae
ENSHGLG00000020243	-	89	85.759	ENSANAG00000027108	-	100	85.759	Aotus_nancymaae
ENSHGLG00000020243	-	100	83.989	ENSANAG00000033377	-	100	83.989	Aotus_nancymaae
ENSHGLG00000020243	-	100	85.955	ENSANAG00000026077	-	100	85.955	Aotus_nancymaae
ENSHGLG00000020243	-	80	93.640	ENSANAG00000019364	-	100	93.640	Aotus_nancymaae
ENSHGLG00000020243	-	97	93.931	ENSANAG00000026989	-	99	93.931	Aotus_nancymaae
ENSHGLG00000020243	-	100	87.079	ENSANAG00000023938	-	100	87.079	Aotus_nancymaae
ENSHGLG00000020243	-	91	97.840	ENSBTAG00000008985	PCBP1	99	97.840	Bos_taurus
ENSHGLG00000020243	-	100	92.416	ENSCJAG00000038388	-	95	92.416	Callithrix_jacchus
ENSHGLG00000020243	-	100	97.472	ENSCAFG00000003326	PCBP1	100	97.472	Canis_familiaris
ENSHGLG00000020243	-	100	97.753	ENSCHIG00000007923	PCBP1	100	97.753	Capra_hircus
ENSHGLG00000020243	-	100	97.191	ENSTSYG00000027848	PCBP1	100	97.191	Carlito_syrichta
ENSHGLG00000020243	-	100	97.753	ENSCPOG00000013511	PCBP1	100	97.753	Cavia_porcellus
ENSHGLG00000020243	-	100	89.045	ENSCCAG00000029186	-	98	89.045	Cebus_capucinus
ENSHGLG00000020243	-	100	97.753	ENSCCAG00000019842	-	100	97.753	Cebus_capucinus
ENSHGLG00000020243	-	100	97.753	ENSCATG00000015029	PCBP1	100	97.753	Cercocebus_atys
ENSHGLG00000020243	-	100	97.191	ENSCLAG00000017909	PCBP1	100	97.191	Chinchilla_lanigera
ENSHGLG00000020243	-	100	97.753	ENSCSAG00000019441	PCBP1	100	97.753	Chlorocebus_sabaeus
ENSHGLG00000020243	-	100	97.753	ENSCANG00000018039	-	100	97.753	Colobus_angolensis_palliatus
ENSHGLG00000020243	-	100	87.640	ENSCANG00000032470	-	94	87.640	Colobus_angolensis_palliatus
ENSHGLG00000020243	-	72	82.353	ENSCANG00000033810	-	87	82.353	Colobus_angolensis_palliatus
ENSHGLG00000020243	-	100	97.753	ENSCGRG00001015078	Pcbp1	100	97.753	Cricetulus_griseus_chok1gshd
ENSHGLG00000020243	-	100	97.753	ENSCGRG00000018899	Pcbp1	100	97.753	Cricetulus_griseus_crigri
ENSHGLG00000020243	-	80	97.193	ENSDNOG00000036372	PCBP1	99	97.193	Dasypus_novemcinctus
ENSHGLG00000020243	-	100	97.753	ENSDORG00000008216	Pcbp1	100	97.753	Dipodomys_ordii
ENSHGLG00000020243	-	100	97.753	ENSFCAG00000022238	PCBP1	100	97.753	Felis_catus
ENSHGLG00000020243	-	100	98.028	ENSFDAG00000019637	PCBP1	100	98.028	Fukomys_damarensis
ENSHGLG00000020243	-	100	97.753	ENSGGOG00000028130	PCBP1	100	97.753	Gorilla_gorilla
ENSHGLG00000020243	-	100	98.310	ENSHGLG00100019620	-	100	98.310	Heterocephalus_glaber_male
ENSHGLG00000020243	-	100	98.028	ENSHGLG00100019761	Pcbp1	100	98.028	Heterocephalus_glaber_male
ENSHGLG00000020243	-	100	97.753	ENSSTOG00000026002	PCBP1	100	97.753	Ictidomys_tridecemlineatus
ENSHGLG00000020243	-	100	97.753	ENSJJAG00000000737	Pcbp1	100	97.753	Jaculus_jaculus
ENSHGLG00000020243	-	95	86.647	ENSMFAG00000003400	PCBP1	100	86.647	Macaca_fascicularis
ENSHGLG00000020243	-	100	97.753	ENSMMUG00000038295	PCBP1	100	97.753	Macaca_mulatta
ENSHGLG00000020243	-	100	97.753	ENSMNEG00000002934	PCBP1	100	97.753	Macaca_nemestrina
ENSHGLG00000020243	-	100	97.753	ENSMLEG00000027389	PCBP1	100	97.753	Mandrillus_leucophaeus
ENSHGLG00000020243	-	100	97.472	ENSMAUG00000009843	Pcbp1	100	97.472	Mesocricetus_auratus
ENSHGLG00000020243	-	100	97.753	ENSMICG00000038221	PCBP1	100	97.753	Microcebus_murinus
ENSHGLG00000020243	-	100	97.753	ENSMOCG00000008102	Pcbp1	100	97.753	Microtus_ochrogaster
ENSHGLG00000020243	-	100	97.753	MGP_CAROLIEiJ_G0028598	Pcbp1	100	97.753	Mus_caroli
ENSHGLG00000020243	-	100	97.753	ENSMUSG00000051695	Pcbp1	100	97.753	Mus_musculus
ENSHGLG00000020243	-	100	97.753	MGP_PahariEiJ_G0022335	Pcbp1	100	97.753	Mus_pahari
ENSHGLG00000020243	-	100	97.753	MGP_SPRETEiJ_G0029609	Pcbp1	100	97.753	Mus_spretus
ENSHGLG00000020243	-	100	94.944	ENSMPUG00000007175	PCBP1	100	94.944	Mustela_putorius_furo
ENSHGLG00000020243	-	100	97.753	ENSMLUG00000014173	PCBP1	100	97.753	Myotis_lucifugus
ENSHGLG00000020243	-	100	97.753	ENSNGAG00000011957	-	100	97.753	Nannospalax_galili
ENSHGLG00000020243	-	100	97.753	ENSNGAG00000014909	-	100	97.753	Nannospalax_galili
ENSHGLG00000020243	-	100	97.753	ENSNLEG00000018722	PCBP1	100	97.753	Nomascus_leucogenys
ENSHGLG00000020243	-	100	81.717	ENSODEG00000000263	PCBP1	100	81.717	Octodon_degus
ENSHGLG00000020243	-	100	97.753	ENSOCUG00000003634	PCBP1	100	97.753	Oryctolagus_cuniculus
ENSHGLG00000020243	-	100	94.944	ENSOGAG00000028946	PCBP1	100	94.944	Otolemur_garnettii
ENSHGLG00000020243	-	100	97.753	ENSOARG00000019516	PCBP1	100	97.753	Ovis_aries
ENSHGLG00000020243	-	98	97.989	ENSPPAG00000036116	PCBP1	99	96.639	Pan_paniscus
ENSHGLG00000020243	-	100	97.753	ENSPPRG00000020533	PCBP1	100	97.753	Panthera_pardus
ENSHGLG00000020243	-	100	97.753	ENSPTIG00000007318	PCBP1	100	97.753	Panthera_tigris_altaica
ENSHGLG00000020243	-	100	97.753	ENSPTRG00000012025	PCBP1	100	97.753	Pan_troglodytes
ENSHGLG00000020243	-	100	97.753	ENSPANG00000011314	PCBP1	100	97.753	Papio_anubis
ENSHGLG00000020243	-	100	97.753	ENSPPYG00000012328	PCBP1	100	97.753	Pongo_abelii
ENSHGLG00000020243	-	100	97.753	ENSPCOG00000026934	PCBP1	100	97.753	Propithecus_coquereli
ENSHGLG00000020243	-	100	96.910	ENSRROG00000009684	-	95	96.910	Rhinopithecus_roxellana
ENSHGLG00000020243	-	93	96.386	ENSRROG00000012514	-	100	96.386	Rhinopithecus_roxellana
ENSHGLG00000020243	-	100	81.461	ENSSBOG00000035309	-	94	81.461	Saimiri_boliviensis_boliviensis
ENSHGLG00000020243	-	100	97.472	ENSSSCG00000027224	PCBP1	100	97.472	Sus_scrofa
ENSHGLG00000020243	-	51	98.333	ENSTBEG00000015706	-	51	98.333	Tupaia_belangeri
ENSHGLG00000020243	-	91	97.523	ENSVVUG00000028033	PCBP1	99	97.523	Vulpes_vulpes