EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000020345 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp1
Alias: -
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 1068 bases
Position: chrJH602075.1:3331354-3332421
Accession: 101726771
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000028163	KH_1	PF00013.29	1.5e-51	1	3
ENSHGLP00000028163	KH_1	PF00013.29	1.5e-51	2	3
ENSHGLP00000028163	KH_1	PF00013.29	1.5e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000028555	-	1068	XM_004849916	ENSHGLP00000028163	355 (aa)	XP_004849973	G5C6V6

Gene Model

Click here to download ENSHGLG00000020345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000020345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000020345	Pcbp1	97	65.896	ENSHGLG00000006371	-	95	65.896
ENSHGLG00000020345	Pcbp1	100	81.744	ENSHGLG00000001776	PCBP2	100	81.744
ENSHGLG00000020345	Pcbp1	68	34.667	ENSHGLG00000013239	KHSRP	58	34.667
ENSHGLG00000020345	Pcbp1	67	40.541	ENSHGLG00000003180	NOVA1	55	40.541
ENSHGLG00000020345	Pcbp1	99	70.170	ENSHGLG00000017847	-	96	70.170
ENSHGLG00000020345	Pcbp1	98	53.258	ENSHGLG00000012018	PCBP4	77	53.258
ENSHGLG00000020345	Pcbp1	100	98.028	ENSHGLG00000020243	-	100	98.028
ENSHGLG00000020345	Pcbp1	99	66.484	ENSHGLG00000018620	PCBP3	91	66.484
ENSHGLG00000020345	Pcbp1	100	79.019	ENSHGLG00000019854	-	100	79.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000020345	Pcbp1	100	99.719	ENSG00000169564	PCBP1	100	99.719	Homo_sapiens
ENSHGLG00000020345	Pcbp1	100	96.910	ENSAMEG00000016094	PCBP1	100	96.910	Ailuropoda_melanoleuca
ENSHGLG00000020345	Pcbp1	100	88.764	ENSANAG00000023938	-	100	88.764	Aotus_nancymaae
ENSHGLG00000020345	Pcbp1	100	87.921	ENSANAG00000026077	-	100	87.921	Aotus_nancymaae
ENSHGLG00000020345	Pcbp1	97	95.954	ENSANAG00000026989	-	99	95.954	Aotus_nancymaae
ENSHGLG00000020345	Pcbp1	80	91.873	ENSANAG00000022494	-	100	91.873	Aotus_nancymaae
ENSHGLG00000020345	Pcbp1	89	87.658	ENSANAG00000027108	-	100	87.658	Aotus_nancymaae
ENSHGLG00000020345	Pcbp1	100	85.393	ENSANAG00000033377	-	100	85.393	Aotus_nancymaae
ENSHGLG00000020345	Pcbp1	80	95.053	ENSANAG00000031745	-	100	95.053	Aotus_nancymaae
ENSHGLG00000020345	Pcbp1	80	95.053	ENSANAG00000019364	-	100	95.053	Aotus_nancymaae
ENSHGLG00000020345	Pcbp1	91	99.691	ENSBTAG00000008985	PCBP1	99	99.691	Bos_taurus
ENSHGLG00000020345	Pcbp1	100	94.101	ENSCJAG00000038388	-	95	94.101	Callithrix_jacchus
ENSHGLG00000020345	Pcbp1	100	99.438	ENSCAFG00000003326	PCBP1	100	99.438	Canis_familiaris
ENSHGLG00000020345	Pcbp1	100	99.719	ENSCHIG00000007923	PCBP1	100	99.719	Capra_hircus
ENSHGLG00000020345	Pcbp1	100	99.157	ENSTSYG00000027848	PCBP1	100	99.157	Carlito_syrichta
ENSHGLG00000020345	Pcbp1	100	99.719	ENSCPOG00000013511	PCBP1	100	99.719	Cavia_porcellus
ENSHGLG00000020345	Pcbp1	100	91.011	ENSCCAG00000029186	-	98	91.011	Cebus_capucinus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSCCAG00000019842	-	100	99.719	Cebus_capucinus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSCATG00000015029	PCBP1	100	99.719	Cercocebus_atys
ENSHGLG00000020345	Pcbp1	100	99.157	ENSCLAG00000017909	PCBP1	100	99.157	Chinchilla_lanigera
ENSHGLG00000020345	Pcbp1	100	99.719	ENSCSAG00000019441	PCBP1	100	99.719	Chlorocebus_sabaeus
ENSHGLG00000020345	Pcbp1	72	84.706	ENSCANG00000033810	-	87	84.706	Colobus_angolensis_palliatus
ENSHGLG00000020345	Pcbp1	100	89.607	ENSCANG00000032470	-	94	89.607	Colobus_angolensis_palliatus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSCANG00000018039	-	100	99.719	Colobus_angolensis_palliatus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSCGRG00001015078	Pcbp1	100	99.719	Cricetulus_griseus_chok1gshd
ENSHGLG00000020345	Pcbp1	100	99.719	ENSCGRG00000018899	Pcbp1	100	99.719	Cricetulus_griseus_crigri
ENSHGLG00000020345	Pcbp1	80	99.298	ENSDNOG00000036372	PCBP1	99	99.298	Dasypus_novemcinctus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSDORG00000008216	Pcbp1	100	99.719	Dipodomys_ordii
ENSHGLG00000020345	Pcbp1	100	99.719	ENSFCAG00000022238	PCBP1	100	99.719	Felis_catus
ENSHGLG00000020345	Pcbp1	100	100.000	ENSFDAG00000019637	PCBP1	100	100.000	Fukomys_damarensis
ENSHGLG00000020345	Pcbp1	100	99.719	ENSGGOG00000028130	PCBP1	100	99.719	Gorilla_gorilla
ENSHGLG00000020345	Pcbp1	100	100.000	ENSHGLG00100019761	Pcbp1	100	100.000	Heterocephalus_glaber_male
ENSHGLG00000020345	Pcbp1	100	99.718	ENSHGLG00100019620	-	100	99.718	Heterocephalus_glaber_male
ENSHGLG00000020345	Pcbp1	100	99.719	ENSSTOG00000026002	PCBP1	100	99.719	Ictidomys_tridecemlineatus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSJJAG00000000737	Pcbp1	100	99.719	Jaculus_jaculus
ENSHGLG00000020345	Pcbp1	95	88.427	ENSMFAG00000003400	PCBP1	100	88.427	Macaca_fascicularis
ENSHGLG00000020345	Pcbp1	100	99.719	ENSMMUG00000038295	PCBP1	100	99.719	Macaca_mulatta
ENSHGLG00000020345	Pcbp1	100	99.719	ENSMNEG00000002934	PCBP1	100	99.719	Macaca_nemestrina
ENSHGLG00000020345	Pcbp1	100	99.719	ENSMLEG00000027389	PCBP1	100	99.719	Mandrillus_leucophaeus
ENSHGLG00000020345	Pcbp1	100	99.438	ENSMAUG00000009843	Pcbp1	100	99.438	Mesocricetus_auratus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSMICG00000038221	PCBP1	100	99.719	Microcebus_murinus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSMOCG00000008102	Pcbp1	100	99.719	Microtus_ochrogaster
ENSHGLG00000020345	Pcbp1	100	99.719	MGP_CAROLIEiJ_G0028598	Pcbp1	100	99.719	Mus_caroli
ENSHGLG00000020345	Pcbp1	100	99.719	ENSMUSG00000051695	Pcbp1	100	99.719	Mus_musculus
ENSHGLG00000020345	Pcbp1	100	99.719	MGP_PahariEiJ_G0022335	Pcbp1	100	99.719	Mus_pahari
ENSHGLG00000020345	Pcbp1	100	99.719	MGP_SPRETEiJ_G0029609	Pcbp1	100	99.719	Mus_spretus
ENSHGLG00000020345	Pcbp1	100	96.910	ENSMPUG00000007175	PCBP1	100	96.910	Mustela_putorius_furo
ENSHGLG00000020345	Pcbp1	100	99.719	ENSMLUG00000014173	PCBP1	100	99.719	Myotis_lucifugus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSNGAG00000014909	-	100	99.719	Nannospalax_galili
ENSHGLG00000020345	Pcbp1	100	99.719	ENSNGAG00000011957	-	100	99.719	Nannospalax_galili
ENSHGLG00000020345	Pcbp1	100	99.719	ENSNLEG00000018722	PCBP1	100	99.719	Nomascus_leucogenys
ENSHGLG00000020345	Pcbp1	100	83.146	ENSODEG00000000263	PCBP1	100	83.146	Octodon_degus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSOCUG00000003634	PCBP1	100	99.719	Oryctolagus_cuniculus
ENSHGLG00000020345	Pcbp1	100	96.910	ENSOGAG00000028946	PCBP1	100	96.910	Otolemur_garnettii
ENSHGLG00000020345	Pcbp1	100	99.719	ENSOARG00000019516	PCBP1	100	99.719	Ovis_aries
ENSHGLG00000020345	Pcbp1	98	100.000	ENSPPAG00000036116	PCBP1	99	98.599	Pan_paniscus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSPPRG00000020533	PCBP1	100	99.719	Panthera_pardus
ENSHGLG00000020345	Pcbp1	100	99.719	ENSPTIG00000007318	PCBP1	100	99.719	Panthera_tigris_altaica
ENSHGLG00000020345	Pcbp1	100	99.719	ENSPTRG00000012025	PCBP1	100	99.719	Pan_troglodytes
ENSHGLG00000020345	Pcbp1	100	99.719	ENSPANG00000011314	PCBP1	100	99.719	Papio_anubis
ENSHGLG00000020345	Pcbp1	100	99.719	ENSPPYG00000012328	PCBP1	100	99.719	Pongo_abelii
ENSHGLG00000020345	Pcbp1	100	99.719	ENSPCOG00000026934	PCBP1	100	99.719	Propithecus_coquereli
ENSHGLG00000020345	Pcbp1	93	98.494	ENSRROG00000012514	-	100	98.494	Rhinopithecus_roxellana
ENSHGLG00000020345	Pcbp1	100	98.876	ENSRROG00000009684	-	95	98.876	Rhinopithecus_roxellana
ENSHGLG00000020345	Pcbp1	100	83.146	ENSSBOG00000035309	-	94	83.146	Saimiri_boliviensis_boliviensis
ENSHGLG00000020345	Pcbp1	100	99.438	ENSSSCG00000027224	PCBP1	100	99.438	Sus_scrofa
ENSHGLG00000020345	Pcbp1	51	100.000	ENSTBEG00000015706	-	51	100.000	Tupaia_belangeri
ENSHGLG00000020345	Pcbp1	91	99.381	ENSVVUG00000028033	PCBP1	99	99.381	Vulpes_vulpes