EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSHGLG00000020936 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Heterocephalus_glaber_female
Status: putative
Strand: Minus strand
Length: 666 bases
Position: chrJH602048.1:10607747-10608412
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSHGLP00000028615	LSM	PF01423.22	8.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSHGLT00000029146	-	666	-	ENSHGLP00000028615	221 (aa)	-	UPI00034F7D81

Gene Model

Click here to download ENSHGLG00000020936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSHGLG00000020936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSHGLG00000020936	-	88	79.812	ENSHGLG00000011924	SNRPN	90	80.930
ENSHGLG00000020936	-	71	80.952	ENSHGLG00000016241	-	75	81.503
ENSHGLG00000020936	-	88	77.143	ENSHGLG00000019812	-	89	77.830
ENSHGLG00000020936	-	66	78.667	ENSHGLG00000016505	-	82	75.882
ENSHGLG00000020936	-	100	70.833	ENSHGLG00000002327	-	92	70.136

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSHGLG00000020936	-	88	79.812	ENSG00000128739	SNRPN	100	88.136	Homo_sapiens
ENSHGLG00000020936	-	87	80.189	ENSAMEG00000007034	SNRPN	88	80.841	Ailuropoda_melanoleuca
ENSHGLG00000020936	-	97	76.955	ENSANAG00000034241	SNRPN	90	80.930	Aotus_nancymaae
ENSHGLG00000020936	-	75	81.250	ENSBTAG00000008251	SNRPN	93	79.710	Bos_taurus
ENSHGLG00000020936	-	88	79.812	ENSCJAG00000003759	-	90	80.930	Callithrix_jacchus
ENSHGLG00000020936	-	88	79.343	ENSCJAG00000042622	-	90	80.465	Callithrix_jacchus
ENSHGLG00000020936	-	88	80.282	ENSCAFG00000010127	SNRPN	90	80.930	Canis_familiaris
ENSHGLG00000020936	-	88	80.282	ENSCAFG00020024075	SNRPN	90	80.930	Canis_lupus_dingo
ENSHGLG00000020936	-	75	81.250	ENSCHIG00000017477	SNRPN	93	80.465	Capra_hircus
ENSHGLG00000020936	-	88	79.812	ENSTSYG00000005248	SNRPN	90	80.930	Carlito_syrichta
ENSHGLG00000020936	-	88	79.812	ENSCAPG00000003047	SNRPN	90	80.930	Cavia_aperea
ENSHGLG00000020936	-	88	79.812	ENSCPOG00000020270	SNRPN	90	80.930	Cavia_porcellus
ENSHGLG00000020936	-	88	79.812	ENSCCAG00000024231	SNRPN	90	80.930	Cebus_capucinus
ENSHGLG00000020936	-	88	79.812	ENSCATG00000032518	SNRPN	90	80.930	Cercocebus_atys
ENSHGLG00000020936	-	88	79.812	ENSCLAG00000011376	SNRPN	90	80.930	Chinchilla_lanigera
ENSHGLG00000020936	-	88	79.812	ENSCSAG00000006406	SNRPN	90	80.930	Chlorocebus_sabaeus
ENSHGLG00000020936	-	85	78.744	ENSCHOG00000001846	SNRPN	79	79.904	Choloepus_hoffmanni
ENSHGLG00000020936	-	88	79.812	ENSCANG00000041156	SNRPN	90	80.930	Colobus_angolensis_palliatus
ENSHGLG00000020936	-	88	79.812	ENSCGRG00001004136	Snrpn	90	80.930	Cricetulus_griseus_chok1gshd
ENSHGLG00000020936	-	71	81.548	ENSCGRG00000001621	Snrpn	73	83.333	Cricetulus_griseus_crigri
ENSHGLG00000020936	-	77	79.330	ENSCVAG00000014193	SNRPN	98	72.034	Cyprinodon_variegatus
ENSHGLG00000020936	-	71	80.838	ENSDNOG00000037060	SNRPN	88	79.907	Dasypus_novemcinctus
ENSHGLG00000020936	-	88	79.343	ENSDORG00000004527	Snrpn	90	80.465	Dipodomys_ordii
ENSHGLG00000020936	-	88	80.282	ENSEASG00005017871	SNRPN	90	80.930	Equus_asinus_asinus
ENSHGLG00000020936	-	88	80.282	ENSECAG00000018148	SNRPN	90	80.930	Equus_caballus
ENSHGLG00000020936	-	87	79.245	ENSEEUG00000007440	-	90	79.907	Erinaceus_europaeus
ENSHGLG00000020936	-	88	80.282	ENSFCAG00000022298	-	90	80.930	Felis_catus
ENSHGLG00000020936	-	74	74.011	ENSFDAG00000010528	-	86	76.271	Fukomys_damarensis
ENSHGLG00000020936	-	88	79.343	ENSFDAG00000016578	-	90	80.465	Fukomys_damarensis
ENSHGLG00000020936	-	76	67.429	ENSGMOG00000018161	SNRPN	76	57.653	Gadus_morhua
ENSHGLG00000020936	-	88	79.812	ENSGGOG00000003988	SNRPN	90	80.930	Gorilla_gorilla
ENSHGLG00000020936	-	88	68.182	ENSGGOG00000024469	-	93	70.312	Gorilla_gorilla
ENSHGLG00000020936	-	100	71.967	ENSHGLG00100004881	-	92	70.909	Heterocephalus_glaber_male
ENSHGLG00000020936	-	88	79.812	ENSHGLG00100016559	SNRPN	90	80.930	Heterocephalus_glaber_male
ENSHGLG00000020936	-	88	77.143	ENSHGLG00100021056	-	89	77.830	Heterocephalus_glaber_male
ENSHGLG00000020936	-	88	79.812	ENSSTOG00000001339	SNRPN	90	80.930	Ictidomys_tridecemlineatus
ENSHGLG00000020936	-	87	79.245	ENSLAFG00000009458	SNRPN	89	80.374	Loxodonta_africana
ENSHGLG00000020936	-	88	79.812	ENSMFAG00000042235	SNRPN	90	80.930	Macaca_fascicularis
ENSHGLG00000020936	-	88	79.812	ENSMMUG00000023139	SNURF	90	80.930	Macaca_mulatta
ENSHGLG00000020936	-	88	79.812	ENSMNEG00000031291	SNRPN	90	80.930	Macaca_nemestrina
ENSHGLG00000020936	-	88	79.812	ENSMLEG00000038837	SNRPN	90	80.930	Mandrillus_leucophaeus
ENSHGLG00000020936	-	71	74.850	ENSMGAG00000008696	SNRPN	71	75.439	Meleagris_gallopavo
ENSHGLG00000020936	-	88	79.812	ENSMAUG00000000051	Snrpn	94	80.930	Mesocricetus_auratus
ENSHGLG00000020936	-	88	79.812	ENSMICG00000042356	SNRPN	90	80.930	Microcebus_murinus
ENSHGLG00000020936	-	88	79.812	ENSMOCG00000015350	Snrpn	90	80.930	Microtus_ochrogaster
ENSHGLG00000020936	-	71	81.548	ENSMODG00000013926	-	72	82.558	Monodelphis_domestica
ENSHGLG00000020936	-	88	79.812	MGP_CAROLIEiJ_G0029815	Snrpn	90	80.930	Mus_caroli
ENSHGLG00000020936	-	88	79.812	ENSMUSG00000102252	Snrpn	90	80.930	Mus_musculus
ENSHGLG00000020936	-	88	79.812	MGP_PahariEiJ_G0013040	Snrpn	90	80.930	Mus_pahari
ENSHGLG00000020936	-	88	79.812	MGP_SPRETEiJ_G0030918	Snrpn	90	80.930	Mus_spretus
ENSHGLG00000020936	-	76	52.023	ENSMPUG00000007115	-	64	60.284	Mustela_putorius_furo
ENSHGLG00000020936	-	88	80.282	ENSMPUG00000014638	-	90	80.930	Mustela_putorius_furo
ENSHGLG00000020936	-	95	55.455	ENSMLUG00000025849	-	58	61.111	Myotis_lucifugus
ENSHGLG00000020936	-	87	79.717	ENSMLUG00000023361	-	88	80.374	Myotis_lucifugus
ENSHGLG00000020936	-	63	62.500	ENSMLUG00000024428	-	64	61.871	Myotis_lucifugus
ENSHGLG00000020936	-	88	79.812	ENSNGAG00000000181	Snrpn	90	80.930	Nannospalax_galili
ENSHGLG00000020936	-	91	66.514	ENSNLEG00000001376	SNRPN	92	66.972	Nomascus_leucogenys
ENSHGLG00000020936	-	88	78.873	ENSODEG00000019708	-	90	80.000	Octodon_degus
ENSHGLG00000020936	-	97	73.778	ENSODEG00000016065	-	88	78.462	Octodon_degus
ENSHGLG00000020936	-	88	79.343	ENSODEG00000020110	-	90	80.465	Octodon_degus
ENSHGLG00000020936	-	88	79.343	ENSODEG00000013478	-	90	80.465	Octodon_degus
ENSHGLG00000020936	-	88	79.439	ENSOCUG00000003532	-	90	76.389	Oryctolagus_cuniculus
ENSHGLG00000020936	-	95	65.899	ENSORLG00020007490	SNRPN	98	70.213	Oryzias_latipes_hni
ENSHGLG00000020936	-	95	65.899	ENSORLG00015003332	SNRPN	98	70.213	Oryzias_latipes_hsok
ENSHGLG00000020936	-	95	66.359	ENSOMEG00000002066	SNRPN	98	70.638	Oryzias_melastigma
ENSHGLG00000020936	-	88	79.812	ENSOGAG00000007392	SNRPN	90	80.930	Otolemur_garnettii
ENSHGLG00000020936	-	75	81.250	ENSOARG00000009080	SNRPN	90	80.465	Ovis_aries
ENSHGLG00000020936	-	88	79.812	ENSPPAG00000027650	SNRPN	90	80.930	Pan_paniscus
ENSHGLG00000020936	-	91	67.150	ENSPPAG00000034049	-	87	67.677	Pan_paniscus
ENSHGLG00000020936	-	88	80.282	ENSPPRG00000019878	-	90	80.930	Panthera_pardus
ENSHGLG00000020936	-	84	58.163	ENSPPRG00000006957	-	76	59.740	Panthera_pardus
ENSHGLG00000020936	-	88	81.221	ENSPTIG00000004537	SNRPN	90	80.930	Panthera_tigris_altaica
ENSHGLG00000020936	-	88	79.812	ENSPTRG00000006826	SNRPN	90	80.930	Pan_troglodytes
ENSHGLG00000020936	-	91	67.633	ENSPTRG00000052400	-	65	74.825	Pan_troglodytes
ENSHGLG00000020936	-	88	79.812	ENSPANG00000020142	SNRPN	90	80.930	Papio_anubis
ENSHGLG00000020936	-	88	68.421	ENSPEMG00000013920	-	89	70.283	Peromyscus_maniculatus_bairdii
ENSHGLG00000020936	-	88	76.526	ENSPEMG00000020979	-	73	80.460	Peromyscus_maniculatus_bairdii
ENSHGLG00000020936	-	88	79.812	ENSPEMG00000012911	-	90	80.930	Peromyscus_maniculatus_bairdii
ENSHGLG00000020936	-	71	80.240	ENSPCIG00000004699	-	55	82.081	Phascolarctos_cinereus
ENSHGLG00000020936	-	77	79.775	ENSPMEG00000020674	SNRPN	98	72.340	Poecilia_mexicana
ENSHGLG00000020936	-	88	79.812	ENSPPYG00000006269	SNURF	90	80.930	Pongo_abelii
ENSHGLG00000020936	-	88	79.812	ENSPCOG00000014231	SNRPN	90	80.930	Propithecus_coquereli
ENSHGLG00000020936	-	88	79.812	ENSRNOG00000059764	Snrpn	90	80.930	Rattus_norvegicus
ENSHGLG00000020936	-	88	79.812	ENSRBIG00000041765	SNRPN	90	80.930	Rhinopithecus_bieti
ENSHGLG00000020936	-	88	79.812	ENSRROG00000035157	SNRPN	90	80.930	Rhinopithecus_roxellana
ENSHGLG00000020936	-	75	81.818	ENSSBOG00000024929	-	90	80.465	Saimiri_boliviensis_boliviensis
ENSHGLG00000020936	-	88	79.812	ENSSBOG00000000110	-	90	80.930	Saimiri_boliviensis_boliviensis
ENSHGLG00000020936	-	71	80.240	ENSSHAG00000010257	-	71	82.081	Sarcophilus_harrisii
ENSHGLG00000020936	-	88	79.812	ENSSSCG00000028124	SNRPN	93	80.465	Sus_scrofa
ENSHGLG00000020936	-	75	81.250	ENSTTRG00000010966	SNRPN	79	80.465	Tursiops_truncatus
ENSHGLG00000020936	-	85	79.710	ENSUAMG00000016284	SNRPN	73	80.383	Ursus_americanus
ENSHGLG00000020936	-	88	80.282	ENSUMAG00000025589	SNRPN	90	80.930	Ursus_maritimus
ENSHGLG00000020936	-	88	80.282	ENSVVUG00000017971	SNRPN	88	80.930	Vulpes_vulpes